Cow genome map
| Conread name: | Mixc-0029,d15 |
| Conread position: | 1-198 |
| Cow position: | chr8:58296716-58296916 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 44, 170 |
| Conread position: | 1-199 |
| Cow position: | chr8:15711628-15711828 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-200 |
| Cow position: | chr8:14928090-14928291 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-200 |
| Cow position: | chr8:16087140-16086940 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 46, 117 |
| Conread position: | 1-200 |
| Cow position: | chr8:25420383-25420583 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 1-200 |
| Cow position: | chr8:30487591-30487792 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 1-200 |
| Cow position: | chr8:38391160-38390960 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-200 |
| Cow position: | chr8:42419642-42419843 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 1-200 |
| Cow position: | chr8:60061171-60060973 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 149 |
| Conread position: | 1-208 |
| Cow position: | chr8:22571521-22571731 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-220 |
| Cow position: | chr8:50288133-50288357 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-221 |
| Cow position: | chr8:1319832-1319606 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:6064980-6065206 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:6684235-6684009 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:8517795-8518021 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:8556359-8556586 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:32631239-32631465 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:34348466-34348240 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:37931879-37931653 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:45797527-45797753 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-221 |
| Cow position: | chr8:46944119-46944350 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-223 |
| Cow position: | chr8:4687191-4686962 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 1-223 |
| Cow position: | chr8:7161686-7161458 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-223 |
| Cow position: | chr8:8911300-8911072 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr8:14591110-14591335 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 1-223 |
| Cow position: | chr8:19189026-19188793 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 1-223 |
| Cow position: | chr8:19330530-19330302 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr8:24915547-24915775 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr8:25408520-25408290 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 1-223 |
| Cow position: | chr8:25523196-25522966 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 1-223 |
| Cow position: | chr8:25775878-25776106 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 1-223 |
| Cow position: | chr8:32318762-32318982 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr8:36635750-36635978 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-223 |
| Cow position: | chr8:39195420-39195650 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-223 |
| Cow position: | chr8:49215229-49215001 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-223 |
| Cow position: | chr8:50930336-50930564 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 46, 141 |
| Conread position: | 1-224 |
| Cow position: | chr8:44243779-44244008 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-226 |
| Cow position: | chr8:17311814-17311583 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-226 |
| Cow position: | chr8:24874323-24874557 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 163 |
| Conread position: | 1-226 |
| Cow position: | chr8:47661531-47661761 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 1-238 |
| Cow position: | chr8:23771429-23771184 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-246 |
| Cow position: | chr8:45160280-45160534 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 1-248 |
| Cow position: | chr8:47069018-47069270 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 228 |
| Conread position: | 1-251 |
| Cow position: | chr8:38606405-38606660 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 97 |
| Conread position: | 1-252 |
| Cow position: | chr8:8315660-8315919 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 42, 141 |
| Conread position: | 1-252 |
| Cow position: | chr8:9736035-9735778 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-252 |
| Cow position: | chr8:27579185-27578933 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 200 |
| Conread position: | 1-252 |
| Cow position: | chr8:30891528-30891784 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 1-252 |
| Cow position: | chr8:33589169-33588913 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 1-252 |
| Cow position: | chr8:42484707-42484451 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 242 |
| Conread position: | 3-222 |
| Cow position: | chr8:12449739-12449515 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 3-223 |
| Cow position: | chr8:3856215-3856448 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 146 |
| Conread position: | 7-252 |
| Cow position: | chr8:5016970-5016720 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 133 |
| Conread position: | 14-246 |
| Cow position: | chr8:24419424-24419666 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 30-200 |
| Cow position: | chr8:51667529-51667701 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 30-223 |
| Cow position: | chr8:10742865-10743064 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 292-630 |
| Cow position: | chr8:38578215-38577878 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 306-637 |
| Cow position: | chr8:19188405-19188740 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 309-637 |
| Cow position: | chr8:16084906-16085236 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 336-460 |
| Cow position: | chr8:51328153-51328279 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 385-634 |
| Cow position: | chr8:47490950-47490700 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 388-637 |
| Cow position: | chr8:24874873-24874617 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 39 |
Show alignments to all cow chromosomes.