Cow genome map
| Conread name: | Mixc-0031e14 |
| Conread position: | 206-638 |
| Cow position: | chr17:22552486-22552910 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 258-638 |
| Cow position: | chr17:22552454-22552826 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 259-636 |
| Cow position: | chr17:22452152-22452522 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 269, 37 |
| Conread position: | 260-638 |
| Cow position: | chr17:22551784-22552154 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 273-638 |
| Cow position: | chr17:22552637-22552994 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 304-632 |
| Cow position: | chr17:22498531-22498859 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 244, 227 |
| Conread position: | 305-638 |
| Cow position: | chr17:22473775-22473444 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 308-638 |
| Cow position: | chr17:22473688-22473360 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 308-638 |
| Cow position: | chr17:22498789-22499117 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 224, 11 |
| Conread position: | 315-578 |
| Cow position: | chr17:22499130-22499393 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-600 |
| Cow position: | chr17:22498626-22498911 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 315-638 |
| Cow position: | chr17:22451864-22452187 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr17:22498962-22499285 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 315-638 |
| Cow position: | chr17:22551915-22552238 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr17:22551999-22552322 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr17:22552083-22552406 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr17:22552419-22552742 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr17:22552755-22553078 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr17:22552839-22553162 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr17:22589585-22589908 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr17:22589669-22589992 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-639 |
| Cow position: | chr17:22473851-22473527 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 217, 230 |
| Conread position: | 316-599 |
| Cow position: | chr17:22590006-22590289 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 317-640 |
| Cow position: | chr17:22551581-22551904 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 10, 15 |
| Conread position: | 322-638 |
| Cow position: | chr17:22473592-22473276 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 28, 32 |
| Conread position: | 322-638 |
| Cow position: | chr17:22498716-22499033 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 302 |
| Conread position: | 322-638 |
| Cow position: | chr17:22551502-22551818 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr17:22551754-22552070 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 322-638 |
| Cow position: | chr17:22589256-22589572 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 323-638 |
| Cow position: | chr17:22473926-22473612 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 293, 7 |
| Conread position: | 325-600 |
| Cow position: | chr17:22499057-22499331 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 326-638 |
| Cow position: | chr17:22552179-22552490 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 326-638 |
| Cow position: | chr17:22589345-22589656 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 35, 5 |
| Conread position: | 326-638 |
| Cow position: | chr17:22589933-22590244 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 328-611 |
| Cow position: | chr17:22452129-22452412 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-638 |
| Cow position: | chr17:22451797-22452103 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 333-638 |
| Cow position: | chr17:22589183-22589488 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-639 |
| Cow position: | chr17:22552269-22552575 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr17:22452051-22452355 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 341-632 |
| Cow position: | chr17:22498904-22499195 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 341-638 |
| Cow position: | chr17:22551689-22551986 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 341-638 |
| Cow position: | chr17:22552361-22552658 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-638 |
| Cow position: | chr17:22589532-22589824 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 354-638 |
| Cow position: | chr17:22589792-22590076 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 364-638 |
| Cow position: | chr17:22451745-22452019 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 92 |
| Conread position: | 373-638 |
| Cow position: | chr17:22589895-22590160 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 175, 162 |
| Conread position: | 383-638 |
| Cow position: | chr17:22473952-22473696 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 384-638 |
| Cow position: | chr17:22551480-22551734 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-638 |
| Cow position: | chr17:22589173-22589404 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 206, 194 |
Show alignments to all cow chromosomes.