Cow genome map
| Conread name: | Mixc-0031e14 |
| Conread position: | 188-638 |
| Cow position: | chr19:14940456-14940015 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 337, 18 |
| Conread position: | 190-499 |
| Cow position: | chr19:14960177-14960477 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 173, 15 |
| Conread position: | 205-638 |
| Cow position: | chr19:20678403-20677978 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 308, 91 |
| Conread position: | 206-627 |
| Cow position: | chr19:14940355-14939942 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 206-638 |
| Cow position: | chr19:23614303-23613879 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 241-638 |
| Cow position: | chr19:23597529-23597140 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 256-638 |
| Cow position: | chr19:23613833-23613459 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 259-638 |
| Cow position: | chr19:20635235-20635606 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 265-599 |
| Cow position: | chr19:14948159-14948484 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 277-638 |
| Cow position: | chr19:14940885-14940519 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 304-638 |
| Cow position: | chr19:14960118-14960448 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 228, 10 |
| Conread position: | 304-638 |
| Cow position: | chr19:20678142-20677810 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 305-638 |
| Cow position: | chr19:14940598-14940267 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 305-638 |
| Cow position: | chr19:14940934-14940603 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 206, 9 |
| Conread position: | 305-638 |
| Cow position: | chr19:14959379-14959708 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 226, 9 |
| Conread position: | 305-638 |
| Cow position: | chr19:20635023-20635354 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 305-638 |
| Cow position: | chr19:20678393-20678062 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 305-638 |
| Cow position: | chr19:23649828-23649497 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 305-640 |
| Cow position: | chr19:43569950-43570280 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 306-638 |
| Cow position: | chr19:20678730-20678398 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 306-638 |
| Cow position: | chr19:23614967-23614635 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 69, 62 |
| Conread position: | 306-639 |
| Cow position: | chr19:23614130-23613794 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 312-636 |
| Cow position: | chr19:14959871-14960194 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 17, 285 |
| Conread position: | 312-638 |
| Cow position: | chr19:23597634-23597308 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-530 |
| Cow position: | chr19:23613531-23613315 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 182, 199 |
| Conread position: | 314-638 |
| Cow position: | chr19:20635114-20635438 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 314-638 |
| Cow position: | chr19:20677966-20677642 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr19:23613699-23613375 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr19:23613867-23613543 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 117, 111 |
| Conread position: | 314-638 |
| Cow position: | chr19:23614371-23614047 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr19:23614623-23614299 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr19:23614791-23614467 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr19:23615043-23614719 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 314-638 |
| Cow position: | chr19:23649989-23649665 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 156, 147 |
| Conread position: | 314-638 |
| Cow position: | chr19:23650073-23649749 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 240, 231 |
| Conread position: | 314-638 |
| Cow position: | chr19:23650325-23650001 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-636 |
| Cow position: | chr19:14958982-14959297 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 315-638 |
| Cow position: | chr19:14940758-14940435 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 315-638 |
| Cow position: | chr19:14941010-14940687 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 293, 286 |
| Conread position: | 315-638 |
| Cow position: | chr19:23650408-23650085 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-639 |
| Cow position: | chr19:43569790-43570114 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 216, 222 |
| Conread position: | 316-638 |
| Cow position: | chr19:23649735-23649413 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-623 |
| Cow position: | chr19:14958817-14959122 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 5 |
| Conread position: | 317-638 |
| Cow position: | chr19:14948119-14948439 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 284, 0 |
| Conread position: | 322-632 |
| Cow position: | chr19:23597373-23597062 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 203 |
| Conread position: | 322-638 |
| Cow position: | chr19:14940500-14940183 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 322-638 |
| Cow position: | chr19:14940667-14940351 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr19:20678546-20678230 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 213, 223 |
| Conread position: | 322-638 |
| Cow position: | chr19:23597540-23597224 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr19:23614699-23614383 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 322-638 |
| Cow position: | chr19:23649897-23649581 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr19:23650233-23649917 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 293, 288 |
| Conread position: | 322-639 |
| Cow position: | chr19:43569715-43570030 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 293, 19 |
| Conread position: | 323-638 |
| Cow position: | chr19:14948040-14948356 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 6, 51 |
| Conread position: | 333-638 |
| Cow position: | chr19:23615108-23614803 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 334-634 |
| Cow position: | chr19:23650137-23649837 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr19:23597696-23597392 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 334-638 |
| Cow position: | chr19:23614435-23614131 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 336-638 |
| Cow position: | chr19:43570063-43570355 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 341-638 |
| Cow position: | chr19:14959817-14960114 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 342-638 |
| Cow position: | chr19:23650465-23650169 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 369-638 |
| Cow position: | chr19:20677995-20677726 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 255, 241 |
| Conread position: | 372-594 |
| Cow position: | chr19:20635424-20635646 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 134, 143 |
| Conread position: | 372-634 |
| Cow position: | chr19:43569931-43570193 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-638 |
| Cow position: | chr19:20678160-20677894 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 150, 134 |
| Conread position: | 372-638 |
| Cow position: | chr19:20678412-20678146 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 84 |
| Conread position: | 372-638 |
| Cow position: | chr19:20678580-20678314 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 247, 252 |
| Conread position: | 372-638 |
| Cow position: | chr19:23614817-23614551 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 163, 175 |
| Conread position: | 376-638 |
| Cow position: | chr19:23613973-23613711 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-638 |
| Cow position: | chr19:23615118-23614887 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 11 |
Show alignments to all cow chromosomes.