Cow genome map
| Conread name: | Mixc-0031e14 |
| Conread position: | 206-535 |
| Cow position: | chr23:24626589-24626268 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 288, 90 |
| Conread position: | 304-502 |
| Cow position: | chr23:24654222-24654024 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 189, 9 |
| Conread position: | 304-638 |
| Cow position: | chr23:24560281-24560613 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 305-583 |
| Cow position: | chr23:24547058-24547334 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 305-638 |
| Cow position: | chr23:24560534-24560865 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 308-638 |
| Cow position: | chr23:24639989-24639661 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 312-564 |
| Cow position: | chr23:24535778-24536030 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr23:24522219-24522543 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr23:24546813-24547137 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr23:25626796-25626475 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 281, 213 |
| Conread position: | 315-578 |
| Cow position: | chr23:24560626-24560889 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 116, 106 |
| Conread position: | 315-584 |
| Cow position: | chr23:24626572-24626303 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 261, 251 |
| Conread position: | 315-638 |
| Cow position: | chr23:24522304-24522624 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 315-638 |
| Cow position: | chr23:24546898-24547221 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr23:24546982-24547305 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr23:24560206-24560529 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 224 |
| Conread position: | 315-638 |
| Cow position: | chr23:24560458-24560781 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr23:24626656-24626333 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr23:24639816-24639493 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr23:25626378-25626055 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr23:25660499-25660176 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 139, 129 |
| Conread position: | 316-638 |
| Cow position: | chr23:25723780-25724102 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 210, 221 |
| Conread position: | 318-638 |
| Cow position: | chr23:25626544-25626223 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 322-563 |
| Cow position: | chr23:25723870-25724111 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 124 |
| Conread position: | 322-605 |
| Cow position: | chr23:24639474-24639191 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 266 |
| Conread position: | 322-626 |
| Cow position: | chr23:25626287-25625983 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 322-638 |
| Cow position: | chr23:24535536-24535852 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr23:24546737-24547053 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr23:24560381-24560697 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 322-638 |
| Cow position: | chr23:24639725-24639409 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr23:25626872-25626559 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 322-638 |
| Cow position: | chr23:25698230-25698547 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 323-638 |
| Cow position: | chr23:25660659-25660344 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 327-600 |
| Cow position: | chr23:25626450-25626177 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-638 |
| Cow position: | chr23:24546660-24546969 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 330-638 |
| Cow position: | chr23:25660736-25660428 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-638 |
| Cow position: | chr23:24654363-24654058 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 333-638 |
| Cow position: | chr23:25626945-25626640 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-559 |
| Cow position: | chr23:24654278-24654053 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-600 |
| Cow position: | chr23:25698411-25698677 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 334-638 |
| Cow position: | chr23:24560141-24560445 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr23:24626721-24626417 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr23:24639881-24639577 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr23:24640049-24639745 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 340-604 |
| Cow position: | chr23:25660389-25660123 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 341-638 |
| Cow position: | chr23:24639538-24639241 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 160, 150 |
| Conread position: | 341-638 |
| Cow position: | chr23:24639622-24639325 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 244, 236 |
| Conread position: | 341-638 |
| Cow position: | chr23:25627021-25626724 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 33 |
| Conread position: | 364-634 |
| Cow position: | chr23:25660534-25660263 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 163, 173 |
| Conread position: | 372-638 |
| Cow position: | chr23:24522193-24522459 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 160, 165 |
| Conread position: | 387-638 |
| Cow position: | chr23:24626750-24626501 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 405-638 |
| Cow position: | chr23:24560128-24560361 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-638 |
| Cow position: | chr23:24522166-24522375 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 187, 192 |
| Conread position: | 444-638 |
| Cow position: | chr23:25723740-25723934 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.