Cow genome map
| Conread name: | Mixc-0031e14 |
| Conread position: | 205-638 |
| Cow position: | chr25:33299684-33299259 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 258-557 |
| Cow position: | chr25:33128030-33127739 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 259-638 |
| Cow position: | chr25:33157078-33157449 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 259-638 |
| Cow position: | chr25:34769309-34769680 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 273-640 |
| Cow position: | chr25:34447319-34446960 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 304-600 |
| Cow position: | chr25:34769768-34770062 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 305-630 |
| Cow position: | chr25:36800902-36800579 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 305-638 |
| Cow position: | chr25:33157202-33157532 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 305-638 |
| Cow position: | chr25:33299170-33298839 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 305-638 |
| Cow position: | chr25:33299254-33298923 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 305-638 |
| Cow position: | chr25:33299338-33299007 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 305-638 |
| Cow position: | chr25:33299506-33299175 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 305-638 |
| Cow position: | chr25:33299674-33299343 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 305-638 |
| Cow position: | chr25:36801070-36800739 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 305-638 |
| Cow position: | chr25:36801238-36800907 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 305-638 |
| Cow position: | chr25:36801814-36801483 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 305-638 |
| Cow position: | chr25:36801898-36801567 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 306-636 |
| Cow position: | chr25:33305695-33306021 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 295, 8 |
| Conread position: | 306-638 |
| Cow position: | chr25:34447715-34447382 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 308-638 |
| Cow position: | chr25:33299755-33299427 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 312-638 |
| Cow position: | chr25:33145364-33145038 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 226, 216 |
| Conread position: | 312-638 |
| Cow position: | chr25:34769690-34770016 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-561 |
| Cow position: | chr25:23420563-23420316 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-599 |
| Cow position: | chr25:36800811-36800526 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 314-619 |
| Cow position: | chr25:33305139-33305437 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 314-638 |
| Cow position: | chr25:23420731-23420407 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 315-587 |
| Cow position: | chr25:33298742-33298470 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-630 |
| Cow position: | chr25:33298826-33298511 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr25:33145193-33144873 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 315-638 |
| Cow position: | chr25:33299414-33299091 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 315-638 |
| Cow position: | chr25:34447453-34447130 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr25:34447537-34447214 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr25:34769609-34769932 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr25:36801722-36801399 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 316-614 |
| Cow position: | chr25:36801637-36801339 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 316-638 |
| Cow position: | chr25:34769442-34769764 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 316-638 |
| Cow position: | chr25:34769526-34769848 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-567 |
| Cow position: | chr25:33306205-33306451 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 317-638 |
| Cow position: | chr25:33156792-33157113 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 291, 306 |
| Conread position: | 319-601 |
| Cow position: | chr25:34769866-34770147 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 247, 11 |
| Conread position: | 322-638 |
| Cow position: | chr25:23420807-23420491 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr25:33304982-33305295 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 134 |
| Conread position: | 322-638 |
| Cow position: | chr25:33305067-33305378 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 216, 46 |
| Conread position: | 322-638 |
| Cow position: | chr25:36801139-36800823 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 322-639 |
| Cow position: | chr25:327263-326946 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 323-638 |
| Cow position: | chr25:326836-326521 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-638 |
| Cow position: | chr25:33298898-33298587 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 326-638 |
| Cow position: | chr25:36800966-36800655 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 333-638 |
| Cow position: | chr25:367054-366749 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr25:346776-346472 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 207, 202 |
| Conread position: | 334-638 |
| Cow position: | chr25:23420879-23420575 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr25:33128046-33127742 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr25:33128130-33127826 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr25:33128214-33127910 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr25:33298975-33298671 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 283, 277 |
| Conread position: | 334-638 |
| Cow position: | chr25:33299815-33299511 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr25:33305642-33305940 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 334-638 |
| Cow position: | chr25:34447350-34447046 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 198, 205 |
| Conread position: | 334-638 |
| Cow position: | chr25:34447602-34447298 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 334-638 |
| Cow position: | chr25:36801295-36800991 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr25:36801955-36801651 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 216, 210 |
| Conread position: | 334-639 |
| Cow position: | chr25:33145426-33145121 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 288, 278 |
| Conread position: | 338-638 |
| Cow position: | chr25:326653-326353 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 341-638 |
| Cow position: | chr25:33299052-33298755 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 370-639 |
| Cow position: | chr25:33306095-33306355 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 103, 81 |
| Conread position: | 372-638 |
| Cow position: | chr25:34769246-34769512 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-638 |
| Cow position: | chr25:36801340-36801075 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 374-600 |
| Cow position: | chr25:22236118-22235891 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 383-638 |
| Cow position: | chr25:33305438-33305694 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 392-638 |
| Cow position: | chr25:33128240-33127994 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 418-640 |
| Cow position: | chr25:23420879-23420657 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.