Cow genome map
| Conread name: | Mixc-0031e14 |
| Conread position: | 206-638 |
| Cow position: | chr28:9253551-9253127 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 267-638 |
| Cow position: | chr28:7810983-7810615 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 349, 29 |
| Conread position: | 305-599 |
| Cow position: | chr28:7758679-7758387 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 305-601 |
| Cow position: | chr28:9253206-9252911 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 269, 22 |
| Conread position: | 305-636 |
| Cow position: | chr28:9253290-9252961 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 305-638 |
| Cow position: | chr28:7757939-7757608 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 305-638 |
| Cow position: | chr28:7810862-7810531 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 227, 9 |
| Conread position: | 306-638 |
| Cow position: | chr28:9253378-9253043 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 308-613 |
| Cow position: | chr28:9290352-9290053 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 259, 21 |
| Conread position: | 308-638 |
| Cow position: | chr28:9299083-9298758 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 314-535 |
| Cow position: | chr28:9298829-9298611 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 314-581 |
| Cow position: | chr28:9299485-9299218 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-599 |
| Cow position: | chr28:11333621-11333906 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 217, 223 |
| Conread position: | 314-638 |
| Cow position: | chr28:7758756-7758432 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 314-638 |
| Cow position: | chr28:11333537-11333861 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 315-519 |
| Cow position: | chr28:7810443-7810248 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 315-559 |
| Cow position: | chr28:7810527-7810283 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-637 |
| Cow position: | chr28:7757679-7757357 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr28:7758015-7757692 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr28:7758183-7757860 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr28:7758267-7757944 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr28:7810770-7810456 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 315-638 |
| Cow position: | chr28:9253534-9253211 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-638 |
| Cow position: | chr28:9290597-9290276 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr28:34696427-34696104 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 299, 286 |
| Conread position: | 318-638 |
| Cow position: | chr28:7758835-7758516 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 318-638 |
| Cow position: | chr28:9253615-9253295 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr28:7757840-7757524 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-638 |
| Cow position: | chr28:7758092-7757776 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 322-638 |
| Cow position: | chr28:34679219-34679536 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 326-638 |
| Cow position: | chr28:9299556-9299245 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 54, 5 |
| Conread position: | 327-638 |
| Cow position: | chr28:33210563-33210252 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 241, 232 |
| Conread position: | 334-638 |
| Cow position: | chr28:7758332-7758028 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 338-638 |
| Cow position: | chr28:7757740-7757440 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 341-639 |
| Cow position: | chr28:7757569-7757277 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 194, 207 |
| Conread position: | 352-638 |
| Cow position: | chr28:9299208-9298925 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 352-638 |
| Cow position: | chr28:33210623-33210336 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 366-638 |
| Cow position: | chr28:9290714-9290443 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 253, 0 |
| Conread position: | 398-638 |
| Cow position: | chr28:7810528-7810288 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 404-638 |
| Cow position: | chr28:9299563-9299329 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.