Cow genome map
| Conread name: | Mixc-0031e14 |
| Conread position: | 183-633 |
| Cow position: | chr7:1439941-1439499 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 195-638 |
| Cow position: | chr7:3180239-3179805 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 205-638 |
| Cow position: | chr7:42878575-42879000 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 94 |
| Conread position: | 206-578 |
| Cow position: | chr7:42878912-42879276 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 231-638 |
| Cow position: | chr7:42878769-42879168 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 259-638 |
| Cow position: | chr7:42878545-42878916 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 265-638 |
| Cow position: | chr7:11600714-11601079 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 304-599 |
| Cow position: | chr7:1015043-1014750 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 304-638 |
| Cow position: | chr7:3180725-3180393 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 305-638 |
| Cow position: | chr7:1015378-1015047 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 237, 9 |
| Conread position: | 307-638 |
| Cow position: | chr7:1440243-1439915 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 312-639 |
| Cow position: | chr7:42878338-42878665 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-564 |
| Cow position: | chr7:3179961-3179711 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr7:3180045-3179721 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr7:3180213-3179889 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 314-638 |
| Cow position: | chr7:3180465-3180141 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr7:3180549-3180225 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-638 |
| Cow position: | chr7:3180633-3180309 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 228, 222 |
| Conread position: | 314-638 |
| Cow position: | chr7:18390762-18390438 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 315-600 |
| Cow position: | chr7:18390425-18390140 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 169, 160 |
| Conread position: | 315-610 |
| Cow position: | chr7:11600588-11600883 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 315-638 |
| Cow position: | chr7:1014698-1014381 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 315-638 |
| Cow position: | chr7:1439985-1439660 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 296, 19 |
| Conread position: | 315-638 |
| Cow position: | chr7:8325164-8324841 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 315-638 |
| Cow position: | chr7:18390677-18390354 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 111, 116 |
| Conread position: | 315-638 |
| Cow position: | chr7:42878425-42878748 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 315-638 |
| Cow position: | chr7:42878929-42879252 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 321-632 |
| Cow position: | chr7:11600846-11601157 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 211, 217 |
| Conread position: | 322-597 |
| Cow position: | chr7:1014943-1014668 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 254, 245 |
| Conread position: | 322-638 |
| Cow position: | chr7:3180794-3180477 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 7, 291 |
| Conread position: | 322-638 |
| Cow position: | chr7:3180876-3180561 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 322-638 |
| Cow position: | chr7:42878768-42879084 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 326-638 |
| Cow position: | chr7:1015274-1014963 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 288, 5 |
| Conread position: | 330-638 |
| Cow position: | chr7:1014605-1014297 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 332-638 |
| Cow position: | chr7:42878189-42878496 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 333-638 |
| Cow position: | chr7:11600438-11600743 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 333-638 |
| Cow position: | chr7:42878275-42878580 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-638 |
| Cow position: | chr7:1015435-1015131 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 197, 205 |
| Conread position: | 334-638 |
| Cow position: | chr7:42878528-42878832 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 218, 201 |
| Conread position: | 341-638 |
| Cow position: | chr7:8278339-8278040 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 352-638 |
| Cow position: | chr7:1438727-1438441 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 355-517 |
| Cow position: | chr7:8278070-8277909 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 364-634 |
| Cow position: | chr7:1440272-1440002 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-638 |
| Cow position: | chr7:18390459-18390186 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-638 |
| Cow position: | chr7:18390795-18390522 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-601 |
| Cow position: | chr7:11600981-11601210 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 176, 160 |
| Conread position: | 372-638 |
| Cow position: | chr7:18390536-18390270 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-638 |
| Cow position: | chr7:8325190-8324925 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 161, 144 |
| Conread position: | 373-638 |
| Cow position: | chr7:11600562-11600827 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.