Non-Coding RNA Search

Cow genome map


           Conread name:
           Mixc-0032,a01
        

               Conread position:
               6-351
               

               Cow position:
               chr6:22215179-22215544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 18
               

               Conread position:
               12-351
               

               Cow position:
               chr6:16287789-16288127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               14-208
               

               Cow position:
               chr6:5600597-5600782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               17-210
               

               Cow position:
               chr6:43770635-43770819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 6
               

               Conread position:
               19-337
               

               Cow position:
               chr6:7189865-7190181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               20-280
               

               Cow position:
               chr6:67451105-67451368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               20-302
               

               Cow position:
               chr6:5819990-5820266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               10, 55
               

               Conread position:
               20-360
               

               Cow position:
               chr6:6067444-6067779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 14
               

               Conread position:
               21-343
               

               Cow position:
               chr6:15446931-15447271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               87, 13
               

               Conread position:
               22-366
               

               Cow position:
               chr6:29210742-29210404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               186, 11
               

               Conread position:
               22-369
               

               Cow position:
               chr6:21736639-21736982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               24-360
               

               Cow position:
               chr6:25614823-25615191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               25-374
               

               Cow position:
               chr6:17314002-17313633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               26-208
               

               Cow position:
               chr6:8726940-8726756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               26-232
               

               Cow position:
               chr6:60186390-60186609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               26-272
               

               Cow position:
               chr6:63066099-63065838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               26-275
               

               Cow position:
               chr6:42483678-42483424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 48
               

               Conread position:
               26-379
               

               Cow position:
               chr6:2547523-2547140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               26-380
               

               Cow position:
               chr6:13040716-13040352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               27-218
               

               Cow position:
               chr6:31928903-31928705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 45
               

               Conread position:
               27-298
               

               Cow position:
               chr6:26155406-26155130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               29-229
               

               Cow position:
               chr6:58697369-58697577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               79, 45
               

               Conread position:
               29-275
               

               Cow position:
               chr6:66590333-66590091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               29-281
               

               Cow position:
               chr6:62079185-62078926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               29-298
               

               Cow position:
               chr6:30024136-30023872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               29-378
               

               Cow position:
               chr6:40032443-40032088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               29-380
               

               Cow position:
               chr6:38771532-38771179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               30-272
               

               Cow position:
               chr6:7628229-7627973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               6, 41
               

               Conread position:
               30-365
               

               Cow position:
               chr6:12669357-12669011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               30-366
               

               Cow position:
               chr6:67187939-67187593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               30-374
               

               Cow position:
               chr6:8966350-8965992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               30-374
               

               Cow position:
               chr6:11192221-11192567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               138, 44
               

               Conread position:
               30-380
               

               Cow position:
               chr6:26043995-26043645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               30-380
               

               Cow position:
               chr6:50090904-50090540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               31-228
               

               Cow position:
               chr6:35984878-35985081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               31-250
               

               Cow position:
               chr6:3937046-3936818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               31-251
               

               Cow position:
               chr6:22876668-22876898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               31-258
               

               Cow position:
               chr6:51933797-51933580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               31-364
               

               Cow position:
               chr6:61269576-61269219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               31-374
               

               Cow position:
               chr6:58371005-58370652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               31-374
               

               Cow position:
               chr6:59602958-59603308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 19
               

               Conread position:
               31-374
               

               Cow position:
               chr6:64432195-64431838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               32-206
               

               Cow position:
               chr6:54406552-54406719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 14
               

               Conread position:
               32-246
               

               Cow position:
               chr6:36537109-36537323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               32-253
               

               Cow position:
               chr6:16091155-16090934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               32-261
               

               Cow position:
               chr6:66947560-66947795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               18, 191
               

               Conread position:
               32-278
               

               Cow position:
               chr6:57320342-57320579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               32-279
               

               Cow position:
               chr6:58459972-58459726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               32-302
               

               Cow position:
               chr6:56986391-56986670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               76, 42
               

               Conread position:
               32-304
               

               Cow position:
               chr6:48097348-48097629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               32-343
               

               Cow position:
               chr6:24339540-24339216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               32-352
               

               Cow position:
               chr6:21004936-21004597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 13
               

               Conread position:
               32-365
               

               Cow position:
               chr6:52478152-52478506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 44
               

               Conread position:
               32-366
               

               Cow position:
               chr6:21399493-21399846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               6, 46
               

               Conread position:
               32-374
               

               Cow position:
               chr6:17414194-17414549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               259
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               32-374
               

               Cow position:
               chr6:18447253-18447609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               32-374
               

               Cow position:
               chr6:23696250-23695893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               32-374
               

               Cow position:
               chr6:38640488-38640130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               76, 42
               

               Conread position:
               33-276
               

               Cow position:
               chr6:60850954-60850708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               33-343
               

               Cow position:
               chr6:693891-694215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               33-343
               

               Cow position:
               chr6:4469022-4468700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 41
               

               Conread position:
               33-351
               

               Cow position:
               chr6:43345179-43345518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               33-364
               

               Cow position:
               chr6:6965138-6965482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               33-374
               

               Cow position:
               chr6:51581000-51581354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               33-380
               

               Cow position:
               chr6:50984474-50984120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               34-211
               

               Cow position:
               chr6:66302355-66302530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               34-218
               

               Cow position:
               chr6:47151074-47150889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               34-223
               

               Cow position:
               chr6:34423207-34423393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               34-223
               

               Cow position:
               chr6:35341933-35342116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               34-238
               

               Cow position:
               chr6:15266111-15266307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               34-244
               

               Cow position:
               chr6:41657518-41657307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               34-244
               

               Cow position:
               chr6:66979126-66978909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               73, 167
               

               Conread position:
               34-272
               

               Cow position:
               chr6:32453646-32453397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               34-276
               

               Cow position:
               chr6:46558309-46558065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 40
               

               Conread position:
               34-279
               

               Cow position:
               chr6:21061637-21061877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               74, 20
               

               Conread position:
               34-280
               

               Cow position:
               chr6:8688595-8688846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               75, 40
               

               Conread position:
               34-280
               

               Cow position:
               chr6:55548277-55548532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               34-319
               

               Cow position:
               chr6:51529938-51530230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               34-343
               

               Cow position:
               chr6:16102937-16103262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               34-343
               

               Cow position:
               chr6:33510040-33509722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               34-350
               

               Cow position:
               chr6:32866969-32867285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               34-366
               

               Cow position:
               chr6:59719067-59718703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               34-374
               

               Cow position:
               chr6:21231762-21231430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 20
               

               Conread position:
               34-374
               

               Cow position:
               chr6:47575144-47574804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 21
               

               Conread position:
               34-380
               

               Cow position:
               chr6:9008362-9008716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               34-380
               

               Cow position:
               chr6:18988446-18988108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               241, 40
               

               Conread position:
               34-380
               

               Cow position:
               chr6:27888600-27888242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               35-200
               

               Cow position:
               chr6:21346902-21347064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               35-227
               

               Cow position:
               chr6:49686076-49685875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               35-228
               

               Cow position:
               chr6:15172809-15172621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               173, 14
               

               Conread position:
               35-229
               

               Cow position:
               chr6:47672901-47673089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               53, 15
               

               Conread position:
               35-272
               

               Cow position:
               chr6:21470180-21470417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 13
               

               Conread position:
               35-272
               

               Cow position:
               chr6:62056864-62056626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               35-273
               

               Cow position:
               chr6:44636260-44636488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               35-275
               

               Cow position:
               chr6:47884789-47885015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               10, 41
               

               Conread position:
               35-280
               

               Cow position:
               chr6:12928394-12928152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               35-280
               

               Cow position:
               chr6:50504707-50504459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               35-300
               

               Cow position:
               chr6:53546283-53546012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               35-322
               

               Cow position:
               chr6:60143945-60144246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               35-339
               

               Cow position:
               chr6:60468485-60468173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               35-343
               

               Cow position:
               chr6:10176043-10176364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               35-351
               

               Cow position:
               chr6:19045881-19045550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               35-363
               

               Cow position:
               chr6:60273755-60274098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               35-369
               

               Cow position:
               chr6:9750792-9751141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 253
               

               Conread position:
               35-369
               

               Cow position:
               chr6:68376061-68376417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               35-374
               

               Cow position:
               chr6:9219517-9219172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               35-374
               

               Cow position:
               chr6:15243515-15243155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               35-374
               

               Cow position:
               chr6:24468146-24468494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               35-374
               

               Cow position:
               chr6:31846990-31847321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               70, 39
               

               Conread position:
               35-380
               

               Cow position:
               chr6:26728290-26728630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               35-380
               

               Cow position:
               chr6:53932589-53932954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               35-383
               

               Cow position:
               chr6:31564096-31564448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               36-198
               

               Cow position:
               chr6:6547262-6547419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               131, 14
               

               Conread position:
               36-245
               

               Cow position:
               chr6:410967-411175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               36-245
               

               Cow position:
               chr6:15058628-15058415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               36-272
               

               Cow position:
               chr6:42035023-42034784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               36-272
               

               Cow position:
               chr6:66570678-66570452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               177, 38
               

               Conread position:
               36-275
               

               Cow position:
               chr6:3351284-3351036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               36-278
               

               Cow position:
               chr6:68685793-68685560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               36-280
               

               Cow position:
               chr6:35436240-35435998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               36-284
               

               Cow position:
               chr6:66839443-66839194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               72, 14
               

               Conread position:
               36-343
               

               Cow position:
               chr6:43134688-43135004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               36-357
               

               Cow position:
               chr6:16700505-16700184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               72, 14
               

               Conread position:
               36-366
               

               Cow position:
               chr6:17794502-17794849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               67, 38
               

               Conread position:
               37-223
               

               Cow position:
               chr6:14383928-14383741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               71, 37
               

               Conread position:
               37-235
               

               Cow position:
               chr6:63168511-63168715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               37-246
               

               Cow position:
               chr6:21083290-21083503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               37-267
               

               Cow position:
               chr6:1866981-1866749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               37-343
               

               Cow position:
               chr6:62370935-62371243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               37-350
               

               Cow position:
               chr6:10039978-10039650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 37
               

               Conread position:
               37-351
               

               Cow position:
               chr6:8600255-8599928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               37-365
               

               Cow position:
               chr6:23532898-23532572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 37
               

               Conread position:
               37-374
               

               Cow position:
               chr6:19264250-19264597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               37-379
               

               Cow position:
               chr6:36645624-36645282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               165, 12
               

               Conread position:
               37-380
               

               Cow position:
               chr6:19996866-19996511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               38-226
               

               Cow position:
               chr6:57467850-57467654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               38-273
               

               Cow position:
               chr6:19225141-19225363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               38-369
               

               Cow position:
               chr6:5609192-5609536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               38-378
               

               Cow position:
               chr6:13367536-13367188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               39-374
               

               Cow position:
               chr6:67951206-67950852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               40-373
               

               Cow position:
               chr6:120486-120143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 34
               

               Conread position:
               40-374
               

               Cow position:
               chr6:44078764-44078417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               41-346
               

               Cow position:
               chr6:37395158-37395480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               67, 15
               

               Conread position:
               41-381
               

               Cow position:
               chr6:11247013-11246657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               42-202
               

               Cow position:
               chr6:53811833-53811667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               42-226
               

               Cow position:
               chr6:16411862-16411672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               42-309
               

               Cow position:
               chr6:60265922-60266214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               42-374
               

               Cow position:
               chr6:4383721-4383385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               42-374
               

               Cow position:
               chr6:24004766-24004442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               42-380
               

               Cow position:
               chr6:65264302-65264646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               43-208
               

               Cow position:
               chr6:55646703-55646872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               43-209
               

               Cow position:
               chr6:4699951-4699785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               43-366
               

               Cow position:
               chr6:13687573-13687906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               44-245
               

               Cow position:
               chr6:24514289-24514507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               44-267
               

               Cow position:
               chr6:13653591-13653370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               61, 166
               

               Conread position:
               44-274
               

               Cow position:
               chr6:62437662-62437423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               44-370
               

               Cow position:
               chr6:29485328-29484993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               44-380
               

               Cow position:
               chr6:8637527-8637170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 85
               

               Conread position:
               45-186
               

               Cow position:
               chr6:59759414-59759271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               45-195
               

               Cow position:
               chr6:66058465-66058616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-201
               

               Cow position:
               chr6:43540018-43540164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               45-208
               

               Cow position:
               chr6:4323567-4323408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               6, 30
               

               Conread position:
               45-208
               

               Cow position:
               chr6:7291555-7291394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-225
               

               Cow position:
               chr6:34463346-34463524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               45-228
               

               Cow position:
               chr6:32006212-32006399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-232
               

               Cow position:
               chr6:59297289-59297104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               45-239
               

               Cow position:
               chr6:15974280-15974475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               45-239
               

               Cow position:
               chr6:53792234-53792424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               166, 29
               

               Conread position:
               45-242
               

               Cow position:
               chr6:21350787-21350991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-249
               

               Cow position:
               chr6:30825532-30825731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               45-251
               

               Cow position:
               chr6:5601944-5601735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               45-272
               

               Cow position:
               chr6:1475581-1475357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               157, 29
               

               Conread position:
               45-272
               

               Cow position:
               chr6:69334072-69334298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               45-275
               

               Cow position:
               chr6:5330658-5330421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-275
               

               Cow position:
               chr6:54127577-54127804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               45-277
               

               Cow position:
               chr6:47959049-47958822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-310
               

               Cow position:
               chr6:56716053-56715790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               45-320
               

               Cow position:
               chr6:2078572-2078865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-331
               

               Cow position:
               chr6:67574634-67574347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-343
               

               Cow position:
               chr6:5095296-5095615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               45-343
               

               Cow position:
               chr6:55282048-55282355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               45-353
               

               Cow position:
               chr6:46466062-46465743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-362
               

               Cow position:
               chr6:22985618-22985948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               66, 29
               

               Conread position:
               45-369
               

               Cow position:
               chr6:15300596-15300915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-370
               

               Cow position:
               chr6:19293043-19292701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               45-374
               

               Cow position:
               chr6:7119385-7119711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               45-374
               

               Cow position:
               chr6:17997073-17997416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-374
               

               Cow position:
               chr6:31535329-31535668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 30
               

               Conread position:
               45-374
               

               Cow position:
               chr6:49421552-49421884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               45-374
               

               Cow position:
               chr6:53024567-53024896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-379
               

               Cow position:
               chr6:23401751-23402095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               45-379
               

               Cow position:
               chr6:26450543-26450215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               168, 28
               

               Conread position:
               45-379
               

               Cow position:
               chr6:36203065-36202722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               45-380
               

               Cow position:
               chr6:15937606-15937958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               45-380
               

               Cow position:
               chr6:36470334-36470675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               168, 29
               

               Conread position:
               45-381
               

               Cow position:
               chr6:57404892-57405230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               46-223
               

               Cow position:
               chr6:37994447-37994274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               46-227
               

               Cow position:
               chr6:36570709-36570518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               46-253
               

               Cow position:
               chr6:23938294-23938091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               166, 28
               

               Conread position:
               46-256
               

               Cow position:
               chr6:50883436-50883650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               46-272
               

               Cow position:
               chr6:21535283-21535048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               46-309
               

               Cow position:
               chr6:8094043-8094323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               46-355
               

               Cow position:
               chr6:35989995-35990315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               46-355
               

               Cow position:
               chr6:56850260-56849930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               46-360
               

               Cow position:
               chr6:37332354-37332020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               46-366
               

               Cow position:
               chr6:62670114-62669778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               46-369
               

               Cow position:
               chr6:37149425-37149091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               46-374
               

               Cow position:
               chr6:32287874-32287537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               46-374
               

               Cow position:
               chr6:50577758-50577423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               46-381
               

               Cow position:
               chr6:143135-143478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               47-202
               

               Cow position:
               chr6:48278653-48278804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               47-251
               

               Cow position:
               chr6:12761522-12761312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               47-280
               

               Cow position:
               chr6:21293256-21293494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               47-366
               

               Cow position:
               chr6:15243081-15242743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               47-366
               

               Cow position:
               chr6:65871273-65870935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               47-374
               

               Cow position:
               chr6:32122137-32121810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               47-374
               

               Cow position:
               chr6:47520296-47519949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               48-343
               

               Cow position:
               chr6:17068414-17068717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               48-369
               

               Cow position:
               chr6:9736404-9736740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               48-369
               

               Cow position:
               chr6:44194315-44194638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               48-380
               

               Cow position:
               chr6:10225409-10225749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               49-274
               

               Cow position:
               chr6:1941594-1941822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               49-343
               

               Cow position:
               chr6:18954852-18955133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               49-369
               

               Cow position:
               chr6:53841263-53841595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               49-378
               

               Cow position:
               chr6:53460331-53460677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               50-257
               

               Cow position:
               chr6:41226608-41226803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               50-270
               

               Cow position:
               chr6:8369663-8369436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               50-278
               

               Cow position:
               chr6:21475964-21475733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               50-279
               

               Cow position:
               chr6:19259119-19259337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               50-309
               

               Cow position:
               chr6:45690380-45690635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               50-318
               

               Cow position:
               chr6:12965093-12964810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               50-343
               

               Cow position:
               chr6:38441419-38441108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               50-347
               

               Cow position:
               chr6:18117809-18118125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               50-351
               

               Cow position:
               chr6:28155934-28156223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               50-365
               

               Cow position:
               chr6:57545990-57546313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               50-366
               

               Cow position:
               chr6:35726329-35726002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               50-369
               

               Cow position:
               chr6:7128165-7128498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               50-369
               

               Cow position:
               chr6:46282753-46283096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               50-374
               

               Cow position:
               chr6:1429873-1429538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               50-374
               

               Cow position:
               chr6:46859932-46860265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               50-379
               

               Cow position:
               chr6:47356065-47355718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               67, 24
               

               Conread position:
               50-380
               

               Cow position:
               chr6:33206968-33206642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               51-241
               

               Cow position:
               chr6:25772981-25773173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               51-265
               

               Cow position:
               chr6:50771123-50771340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               51-272
               

               Cow position:
               chr6:57079664-57079435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               51-294
               

               Cow position:
               chr6:58725605-58725358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               51-374
               

               Cow position:
               chr6:10105745-10106093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               52-230
               

               Cow position:
               chr6:38033095-38032913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               52-256
               

               Cow position:
               chr6:61110019-61109815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               52-272
               

               Cow position:
               chr6:8499364-8499159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               52-278
               

               Cow position:
               chr6:67069578-67069809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               52-345
               

               Cow position:
               chr6:9302486-9302786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               52-354
               

               Cow position:
               chr6:46173021-46173331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 22
               

               Conread position:
               53-272
               

               Cow position:
               chr6:57089440-57089209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               53-339
               

               Cow position:
               chr6:49437567-49437280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               54-370
               

               Cow position:
               chr6:39358108-39358440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               56-170
               

               Cow position:
               chr6:60674064-60673951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               56-187
               

               Cow position:
               chr6:62849154-62849025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               56-208
               

               Cow position:
               chr6:154705-154548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               56-267
               

               Cow position:
               chr6:12623742-12623532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               56-333
               

               Cow position:
               chr6:18144434-18144135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               56-343
               

               Cow position:
               chr6:12338223-12337919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               56-366
               

               Cow position:
               chr6:24031596-24031286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               56-369
               

               Cow position:
               chr6:49398396-49398710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               56-374
               

               Cow position:
               chr6:19446486-19446158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               56-374
               

               Cow position:
               chr6:36196435-36196113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               57-351
               

               Cow position:
               chr6:60118374-60118074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               57-374
               

               Cow position:
               chr6:38853424-38853755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               58-208
               

               Cow position:
               chr6:2014357-2014207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 18
               

               Conread position:
               58-208
               

               Cow position:
               chr6:63182516-63182367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               58-357
               

               Cow position:
               chr6:32268656-32268958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               59-278
               

               Cow position:
               chr6:48379381-48379608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               59-351
               

               Cow position:
               chr6:44867316-44867615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               60-374
               

               Cow position:
               chr6:60740239-60739914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               61-343
               

               Cow position:
               chr6:41375998-41375702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               61-374
               

               Cow position:
               chr6:38207258-38207592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               62-272
               

               Cow position:
               chr6:36920746-36920963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 98
               

               Conread position:
               62-357
               

               Cow position:
               chr6:12091759-12092077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               63-322
               

               Cow position:
               chr6:31078641-31078919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               64-351
               

               Cow position:
               chr6:19696034-19695732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               64-369
               

               Cow position:
               chr6:38641720-38641398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 144
               

               Conread position:
               66-309
               

               Cow position:
               chr6:34119140-34119387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               66-331
               

               Cow position:
               chr6:2585164-2584885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               66-343
               

               Cow position:
               chr6:5113824-5114113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               66-366
               

               Cow position:
               chr6:47305565-47305246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               66-374
               

               Cow position:
               chr6:15305794-15305480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               66-380
               

               Cow position:
               chr6:51835621-51835289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               69-343
               

               Cow position:
               chr6:35842881-35842587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               71-188
               

               Cow position:
               chr6:68602461-68602342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 64
               

               Conread position:
               71-236
               

               Cow position:
               chr6:40682449-40682615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               71-272
               

               Cow position:
               chr6:33450758-33450958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               38, 64
               

               Conread position:
               71-273
               

               Cow position:
               chr6:1870978-1871187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 143
               

               Conread position:
               71-354
               

               Cow position:
               chr6:28483236-28482938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               71-366
               

               Cow position:
               chr6:4691746-4692073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               71-400
               

               Cow position:
               chr6:27239785-27240131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 328
               

               Conread position:
               72-219
               

               Cow position:
               chr6:2758000-2757852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               72-365
               

               Cow position:
               chr6:46292137-46292436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               72-366
               

               Cow position:
               chr6:54133029-54132724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               69, 35
               

               Conread position:
               72-369
               

               Cow position:
               chr6:63720410-63720099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               73-198
               

               Cow position:
               chr6:53235436-53235564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               74-369
               

               Cow position:
               chr6:8125545-8125232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               75-335
               

               Cow position:
               chr6:68816386-68816107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               33, 183
               

               Conread position:
               77-372
               

               Cow position:
               chr6:26915541-26915231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               79-343
               

               Cow position:
               chr6:67643478-67643759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               80-381
               

               Cow position:
               chr6:22525536-22525226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               80-382
               

               Cow position:
               chr6:61168975-61168665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 197
               

               Conread position:
               81-266
               

               Cow position:
               chr6:40774125-40774314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               81-343
               

               Cow position:
               chr6:6060362-6060631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               85-369
               

               Cow position:
               chr6:20097757-20098060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               85-380
               

               Cow position:
               chr6:61523999-61524308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 229
               

               Conread position:
               91-339
               

               Cow position:
               chr6:67282090-67281833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               92-369
               

               Cow position:
               chr6:57571676-57571381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               96-351
               

               Cow position:
               chr6:2623961-2623706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               104-302
               

               Cow position:
               chr6:51086252-51086045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               104-374
               

               Cow position:
               chr6:48112381-48112098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               109-362
               

               Cow position:
               chr6:11830363-11830108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               165, 17
               

               Conread position:
               109-374
               

               Cow position:
               chr6:66531643-66531922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               110-354
               

               Cow position:
               chr6:9452596-9452850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               116-272
               

               Cow position:
               chr6:1002093-1002251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               92, 16
               

               Conread position:
               116-336
               

               Cow position:
               chr6:61142391-61142625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               116-379
               

               Cow position:
               chr6:47339184-47339458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               117-270
               

               Cow position:
               chr6:61569803-61569646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               117-380
               

               Cow position:
               chr6:582100-582376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               118-253
               

               Cow position:
               chr6:60516792-60516656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 22
               

               Conread position:
               118-351
               

               Cow position:
               chr6:63298862-63299108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               121-366
               

               Cow position:
               chr6:67214918-67214651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               121-374
               

               Cow position:
               chr6:47799460-47799190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               122-298
               

               Cow position:
               chr6:53090174-53089986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               124-276
               

               Cow position:
               chr6:51969238-51969085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               124-280
               

               Cow position:
               chr6:46331082-46330929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               124-318
               

               Cow position:
               chr6:55535590-55535792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 8
               

               Conread position:
               124-320
               

               Cow position:
               chr6:1422648-1422440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               124-343
               

               Cow position:
               chr6:35993747-35993518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               124-352
               

               Cow position:
               chr6:23465871-23466108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               89, 80
               

               Conread position:
               124-357
               

               Cow position:
               chr6:10224355-10224126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               124-360
               

               Cow position:
               chr6:6401112-6400864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               143, 15
               

               Conread position:
               124-369
               

               Cow position:
               chr6:53652202-53651947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               125-270
               

               Cow position:
               chr6:28900487-28900340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               83, 7
               

               Conread position:
               125-351
               

               Cow position:
               chr6:65259330-65259552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               125-370
               

               Cow position:
               chr6:21235206-21234947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 192
               

               Conread position:
               126-266
               

               Cow position:
               chr6:54471772-54471913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               108, 6
               

               Conread position:
               126-339
               

               Cow position:
               chr6:51675068-51674849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               126-374
               

               Cow position:
               chr6:59069456-59069725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               126-374
               

               Cow position:
               chr6:60667571-60667317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               127-272
               

               Cow position:
               chr6:36012062-36011917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-365
               

               Cow position:
               chr6:5302258-5302508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               127-366
               

               Cow position:
               chr6:14958179-14958438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               127-369
               

               Cow position:
               chr6:6343590-6343330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               73, 173
               

               Conread position:
               127-374
               

               Cow position:
               chr6:21869488-21869749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               7, 203
               

               Conread position:
               128-351
               

               Cow position:
               chr6:21111113-21110889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               16, 153
               

               Conread position:
               129-331
               

               Cow position:
               chr6:58590431-58590219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 184
               

               Conread position:
               130-351
               

               Cow position:
               chr6:37463178-37462946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 7
               

               Conread position:
               130-365
               

               Cow position:
               chr6:45064860-45065106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 210
               

               Conread position:
               130-366
               

               Cow position:
               chr6:58597348-58597597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 182
               

               Conread position:
               130-374
               

               Cow position:
               chr6:51463477-51463713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               130-380
               

               Cow position:
               chr6:8787879-8788143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               7, 172
               

               Conread position:
               131-343
               

               Cow position:
               chr6:12845535-12845317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               132-308
               

               Cow position:
               chr6:37466250-37466068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 140
               

               Conread position:
               132-379
               

               Cow position:
               chr6:57164581-57164320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               6, 31
               

               Conread position:
               132-380
               

               Cow position:
               chr6:28999784-29000032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               136-278
               

               Cow position:
               chr6:54529438-54529301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               136-374
               

               Cow position:
               chr6:20196152-20196394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               137-280
               

               Cow position:
               chr6:19131580-19131434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               137-318
               

               Cow position:
               chr6:16707162-16706968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               137-318
               

               Cow position:
               chr6:28976890-28977087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               137-322
               

               Cow position:
               chr6:16352204-16352394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 120
               

               Conread position:
               137-332
               

               Cow position:
               chr6:60516975-60516773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               70, 173
               

               Conread position:
               137-338
               

               Cow position:
               chr6:28178805-28179009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               126, 70
               

               Conread position:
               137-343
               

               Cow position:
               chr6:68049567-68049369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               141, 60
               

               Conread position:
               137-360
               

               Cow position:
               chr6:54990851-54991090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               137-364
               

               Cow position:
               chr6:17245468-17245697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               67, 38
               

               Conread position:
               137-367
               

               Cow position:
               chr6:19013213-19012971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               132, 60
               

               Conread position:
               137-370
               

               Cow position:
               chr6:42565837-42565591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               137-374
               

               Cow position:
               chr6:46571255-46571016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 112
               

               Conread position:
               137-378
               

               Cow position:
               chr6:528134-528376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 170
               

               Conread position:
               137-380
               

               Cow position:
               chr6:54867667-54867406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               139-366
               

               Cow position:
               chr6:28477316-28477085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 138
               

               Conread position:
               140-254
               

               Cow position:
               chr6:54349840-54349724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               140-271
               

               Cow position:
               chr6:4702677-4702810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 70
               

               Conread position:
               140-273
               

               Cow position:
               chr6:18422844-18422980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               140-274
               

               Cow position:
               chr6:43651899-43651762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               140-320
               

               Cow position:
               chr6:32853334-32853141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               140-360
               

               Cow position:
               chr6:60350145-60350382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               140-369
               

               Cow position:
               chr6:12551417-12551174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 81
               

               Conread position:
               140-374
               

               Cow position:
               chr6:8209459-8209692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               140-374
               

               Cow position:
               chr6:47640286-47640534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 6
               

               Conread position:
               140-380
               

               Cow position:
               chr6:7130733-7130987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 207
               

               Conread position:
               141-271
               

               Cow position:
               chr6:57328248-57328380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               141-380
               

               Cow position:
               chr6:16423847-16423593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               71, 45
               

               Conread position:
               142-322
               

               Cow position:
               chr6:68652206-68652400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               142-339
               

               Cow position:
               chr6:29248622-29248427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               88, 68
               

               Conread position:
               142-374
               

               Cow position:
               chr6:38218811-38218571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               71, 224
               

               Conread position:
               142-374
               

               Cow position:
               chr6:56843299-56843055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               136, 220
               

               Conread position:
               143-314
               

               Cow position:
               chr6:32516966-32517139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               143-320
               

               Cow position:
               chr6:35613273-35613469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               143-347
               

               Cow position:
               chr6:59770367-59770157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               122, 13
               

               Conread position:
               143-360
               

               Cow position:
               chr6:66874493-66874263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               143-366
               

               Cow position:
               chr6:50976192-50975965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               66, 182
               

               Conread position:
               143-374
               

               Cow position:
               chr6:4864403-4864649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 67
               

               Conread position:
               145-372
               

               Cow position:
               chr6:66375191-66375429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               148-374
               

               Cow position:
               chr6:38614951-38614718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               110, 68
               

               Conread position:
               153-366
               

               Cow position:
               chr6:23247833-23248052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               160-374
               

               Cow position:
               chr6:899166-899391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               160-374
               

               Cow position:
               chr6:61608639-61608410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               161-342
               

               Cow position:
               chr6:15022421-15022615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               162-379
               

               Cow position:
               chr6:12542805-12543039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               162-380
               

               Cow position:
               chr6:28318522-28318297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               167-366
               

               Cow position:
               chr6:130043-130254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               169-320
               

               Cow position:
               chr6:47306029-47306183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               170-369
               

               Cow position:
               chr6:377242-377033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               170-374
               

               Cow position:
               chr6:30974159-30973951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               108, 41
               

               Conread position:
               170-374
               

               Cow position:
               chr6:54368787-54369001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               182-374
               

               Cow position:
               chr6:52248025-52248232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               211-374
               

               Cow position:
               chr6:18961442-18961617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               211-374
               

               Cow position:
               chr6:21542396-21542219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               213-342
               

               Cow position:
               chr6:7170281-7170414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               221-369
               

               Cow position:
               chr6:32210576-32210724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               79, 43
               
Show alignments to all cow chromosomes.
Conread position:	6-351
Cow position:	chr6:22215179-22215544 (view UCSC Genome Browser custom track)
Alignm length:	369
Alignm identity:	240
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	12, 18
Conread position:	12-351
Cow position:	chr6:16287789-16288127 (view UCSC Genome Browser custom track)
Alignm length:	345
Alignm identity:	242
Alignm E-value:	0
Alignm gaps (pig, cow):	11, 63
Conread position:	14-208
Cow position:	chr6:5600597-5600782 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	140
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	31, 0
Conread position:	17-210
Cow position:	chr6:43770635-43770819 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	143
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	91, 6
Conread position:	19-337
Cow position:	chr6:7189865-7190181 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	229
Alignm E-value:	9e-28
Alignm gaps (pig, cow):	89, 11
Conread position:	20-280
Cow position:	chr6:67451105-67451368 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	203
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	12, 25
Conread position:	20-302
Cow position:	chr6:5819990-5820266 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	191
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	10, 55
Conread position:	20-360
Cow position:	chr6:6067444-6067779 (view UCSC Genome Browser custom track)
Alignm length:	350
Alignm identity:	250
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	41, 14
Conread position:	21-343
Cow position:	chr6:15446931-15447271 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	234
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	87, 13
Conread position:	22-366
Cow position:	chr6:29210742-29210404 (view UCSC Genome Browser custom track)
Alignm length:	359
Alignm identity:	255
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	186, 11
Conread position:	22-369
Cow position:	chr6:21736639-21736982 (view UCSC Genome Browser custom track)
Alignm length:	361
Alignm identity:	250
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	86, 12
Conread position:	24-360
Cow position:	chr6:25614823-25615191 (view UCSC Genome Browser custom track)
Alignm length:	370
Alignm identity:	262
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	8, 52
Conread position:	25-374
Cow position:	chr6:17314002-17313633 (view UCSC Genome Browser custom track)
Alignm length:	374
Alignm identity:	254
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	10, 26
Conread position:	26-208
Cow position:	chr6:8726940-8726756 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	137
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	82, 49
Conread position:	26-232
Cow position:	chr6:60186390-60186609 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	166
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	46, 22
Conread position:	26-272
Cow position:	chr6:63066099-63065838 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	200
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	82, 23
Conread position:	26-275
Cow position:	chr6:42483678-42483424 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	169
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	81, 48
Conread position:	26-379
Cow position:	chr6:2547523-2547140 (view UCSC Genome Browser custom track)
Alignm length:	387
Alignm identity:	265
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	55, 24
Conread position:	26-380
Cow position:	chr6:13040716-13040352 (view UCSC Genome Browser custom track)
Alignm length:	378
Alignm identity:	267
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	82, 48
Conread position:	27-218
Cow position:	chr6:31928903-31928705 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	144
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	30, 45