Cow genome map

Conread name: Mixc-0032,a01

Conread position: 9-197
Cow position: chr12:37718562-37718759 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 69

Conread position: 19-245
Cow position: chr12:2964238-2964011 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 19-351
Cow position: chr12:4720139-4719790 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 17, 58

Conread position: 22-379
Cow position: chr12:15429408-15429778 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 54

Conread position: 24-308
Cow position: chr12:18582813-18583104 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 5, 25

Conread position: 28-239
Cow position: chr12:20439079-20439288 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 50

Conread position: 28-378
Cow position: chr12:34148159-34148533 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 77, 17

Conread position: 29-197
Cow position: chr12:40434857-40435031 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 49

Conread position: 29-211
Cow position: chr12:44861076-44861262 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 5

Conread position: 29-272
Cow position: chr12:6754370-6754130 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 77, 25

Conread position: 29-280
Cow position: chr12:42286144-42285895 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 179, 15

Conread position: 29-366
Cow position: chr12:26868637-26868966 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 28

Conread position: 29-369
Cow position: chr12:35310496-35310847 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 49

Conread position: 29-374
Cow position: chr12:25804964-25805289 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 79, 20

Conread position: 29-391
Cow position: chr12:15089696-15089318 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 21

Conread position: 30-278
Cow position: chr12:29057569-29057315 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 74, 20

Conread position: 30-364
Cow position: chr12:23917021-23916675 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 45

Conread position: 30-366
Cow position: chr12:19714877-19715206 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 47

Conread position: 31-208
Cow position: chr12:46106969-46106791 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 77, 43

Conread position: 31-343
Cow position: chr12:9766701-9767020 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 43

Conread position: 31-374
Cow position: chr12:25561545-25561193 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 18

Conread position: 32-190
Cow position: chr12:15151699-15151850 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 23

Conread position: 32-193
Cow position: chr12:19056855-19056688 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 42

Conread position: 32-208
Cow position: chr12:17254322-17254142 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 26, 43

Conread position: 32-208
Cow position: chr12:17490392-17490216 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 42

Conread position: 32-228
Cow position: chr12:42951511-42951706 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 43

Conread position: 32-232
Cow position: chr12:3057266-3057061 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 16

Conread position: 32-240
Cow position: chr12:29180852-29180639 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 76, 17

Conread position: 32-263
Cow position: chr12:43974471-43974236 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 42

Conread position: 32-272
Cow position: chr12:6187930-6188180 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 42

Conread position: 32-272
Cow position: chr12:26749771-26750020 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 42

Conread position: 32-274
Cow position: chr12:45092619-45092378 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 42

Conread position: 32-318
Cow position: chr12:7902629-7902923 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 12

Conread position: 32-322
Cow position: chr12:10942473-10942160 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 42

Conread position: 32-343
Cow position: chr12:13988553-13988225 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 42

Conread position: 32-353
Cow position: chr12:24032667-24032343 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 32-363
Cow position: chr12:42784485-42784139 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 18

Conread position: 33-223
Cow position: chr12:25528385-25528572 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 17

Conread position: 33-251
Cow position: chr12:14986925-14986704 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 41

Conread position: 33-272
Cow position: chr12:26151303-26151527 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 118, 28

Conread position: 34-209
Cow position: chr12:41684682-41684507 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 41

Conread position: 34-214
Cow position: chr12:20654304-20654483 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 40

Conread position: 34-227
Cow position: chr12:22048100-22047903 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 16

Conread position: 34-255
Cow position: chr12:43474937-43474711 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 42

Conread position: 34-276
Cow position: chr12:40881749-40881979 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 20

Conread position: 34-293
Cow position: chr12:40200873-40200609 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 109, 40

Conread position: 34-304
Cow position: chr12:21780342-21780059 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 26

Conread position: 34-306
Cow position: chr12:13911399-13911686 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 40

Conread position: 34-310
Cow position: chr12:35240928-35241214 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 74, 21

Conread position: 34-329
Cow position: chr12:6468897-6469195 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 74, 27

Conread position: 34-343
Cow position: chr12:16670444-16670119 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 42

Conread position: 34-366
Cow position: chr12:42282663-42283005 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 222
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 16

Conread position: 34-374
Cow position: chr12:5635273-5635626 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 43

Conread position: 34-374
Cow position: chr12:18388115-18388461 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 95, 29

Conread position: 35-207
Cow position: chr12:3454873-3454696 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 39

Conread position: 35-208
Cow position: chr12:583326-583509 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 41

Conread position: 35-232
Cow position: chr12:4512275-4512476 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 73, 39

Conread position: 35-252
Cow position: chr12:23106117-23105891 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 41

Conread position: 35-253
Cow position: chr12:24437456-24437682 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 39

Conread position: 35-267
Cow position: chr12:38154890-38155132 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 42

Conread position: 35-267
Cow position: chr12:40157851-40158083 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 40

Conread position: 35-272
Cow position: chr12:5839490-5839722 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 28

Conread position: 35-272
Cow position: chr12:14223159-14222916 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 39

Conread position: 35-280
Cow position: chr12:37514110-37514356 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 73, 55

Conread position: 35-320
Cow position: chr12:10763420-10763141 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 15

Conread position: 35-352
Cow position: chr12:23446892-23446569 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 73, 41

Conread position: 35-365
Cow position: chr12:44622535-44622184 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 35-374
Cow position: chr12:39465737-39465403 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 174, 11

Conread position: 36-240
Cow position: chr12:29316287-29316496 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 74, 38

Conread position: 36-267
Cow position: chr12:1333392-1333170 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 40

Conread position: 36-267
Cow position: chr12:36261869-36261628 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 72, 38

Conread position: 36-279
Cow position: chr12:18513753-18514001 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 72, 12

Conread position: 36-327
Cow position: chr12:7884505-7884812 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 38

Conread position: 36-353
Cow position: chr12:22284944-22285277 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 31

Conread position: 36-366
Cow position: chr12:31948289-31947947 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 226
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 35

Conread position: 36-374
Cow position: chr12:18123840-18123507 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 36-374
Cow position: chr12:35368819-35368462 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 91, 38

Conread position: 36-380
Cow position: chr12:12637008-12637374 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 18, 40

Conread position: 37-209
Cow position: chr12:19272517-19272689 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 12

Conread position: 37-251
Cow position: chr12:48579009-48578798 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 38

Conread position: 37-280
Cow position: chr12:5554161-5554410 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 39

Conread position: 37-374
Cow position: chr12:18420748-18421102 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 13

Conread position: 37-380
Cow position: chr12:19502240-19502601 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 37

Conread position: 38-242
Cow position: chr12:20355397-20355177 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 32

Conread position: 38-273
Cow position: chr12:29966278-29966038 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 36

Conread position: 38-366
Cow position: chr12:8943040-8943390 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 38

Conread position: 38-366
Cow position: chr12:26217656-26217995 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 12

Conread position: 38-374
Cow position: chr12:6241499-6241134 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 9, 38

Conread position: 38-374
Cow position: chr12:17031780-17031436 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 38-380
Cow position: chr12:18577999-18577661 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 16

Conread position: 39-242
Cow position: chr12:1952631-1952837 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 10, 42

Conread position: 39-267
Cow position: chr12:15389244-15389010 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 37

Conread position: 39-380
Cow position: chr12:42684760-42685132 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 204

Conread position: 41-258
Cow position: chr12:22859619-22859416 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 41-271
Cow position: chr12:4594669-4594436 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 33

Conread position: 42-277
Cow position: chr12:18103446-18103679 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 34

Conread position: 42-280
Cow position: chr12:42749614-42749367 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 34

Conread position: 42-337
Cow position: chr12:17269967-17269659 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 23

Conread position: 42-351
Cow position: chr12:20479175-20479475 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 32

Conread position: 43-196
Cow position: chr12:44892377-44892220 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 31

Conread position: 43-374
Cow position: chr12:36544478-36544828 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 13

Conread position: 44-205
Cow position: chr12:19061340-19061503 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 31

Conread position: 44-343
Cow position: chr12:35770857-35771165 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 30

Conread position: 44-351
Cow position: chr12:12301095-12300767 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 31

Conread position: 45-180
Cow position: chr12:3579650-3579513 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 29

Conread position: 45-190
Cow position: chr12:38165375-38165522 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 29

Conread position: 45-191
Cow position: chr12:16624983-16624841 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 84, 30

Conread position: 45-205
Cow position: chr12:2835571-2835407 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 29

Conread position: 45-228
Cow position: chr12:17250667-17250493 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 12

Conread position: 45-229
Cow position: chr12:17701868-17702048 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 32

Conread position: 45-242
Cow position: chr12:6480813-6480604 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 45-252
Cow position: chr12:23714838-23714628 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 29

Conread position: 45-258
Cow position: chr12:43855055-43854843 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 11

Conread position: 45-278
Cow position: chr12:10827952-10827714 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 29

Conread position: 45-279
Cow position: chr12:37008544-37008776 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 29

Conread position: 45-280
Cow position: chr12:31883512-31883264 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 29

Conread position: 45-336
Cow position: chr12:30590935-30590628 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 48, 29

Conread position: 45-343
Cow position: chr12:24639794-24639508 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 29

Conread position: 45-343
Cow position: chr12:36790647-36790957 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 29

Conread position: 45-343
Cow position: chr12:46120652-46120976 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 55, 20

Conread position: 45-351
Cow position: chr12:4596639-4596312 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 29

Conread position: 45-351
Cow position: chr12:42180960-42181292 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 32

Conread position: 45-355
Cow position: chr12:37169783-37170103 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 29

Conread position: 45-369
Cow position: chr12:5714784-5714454 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 63, 29

Conread position: 45-369
Cow position: chr12:20776763-20777096 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-369
Cow position: chr12:30210636-30210308 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-369
Cow position: chr12:33851522-33851185 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-369
Cow position: chr12:41084212-41083895 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 45-374
Cow position: chr12:9143552-9143218 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 63, 21

Conread position: 45-374
Cow position: chr12:16605503-16605831 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 29

Conread position: 45-374
Cow position: chr12:18518838-18518487 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-374
Cow position: chr12:30745882-30745537 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 63, 29

Conread position: 45-374
Cow position: chr12:33976369-33976022 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 64, 30

Conread position: 45-374
Cow position: chr12:42967163-42966821 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 31

Conread position: 45-379
Cow position: chr12:9229350-9229666 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 163, 29

Conread position: 45-380
Cow position: chr12:34161570-34161233 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 30

Conread position: 46-220
Cow position: chr12:38679213-38679039 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 28

Conread position: 46-226
Cow position: chr12:6958385-6958199 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 29

Conread position: 46-228
Cow position: chr12:6666726-6666552 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 28

Conread position: 46-228
Cow position: chr12:44822447-44822274 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 28

Conread position: 46-338
Cow position: chr12:7110373-7110059 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 28

Conread position: 46-339
Cow position: chr12:44202828-44203125 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 54

Conread position: 46-666
Cow position: chr12:29762077-29762707 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 29

Conread position: 47-270
Cow position: chr12:24166785-24167008 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 61, 27

Conread position: 47-343
Cow position: chr12:19258440-19258133 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 27

Conread position: 47-374
Cow position: chr12:4769083-4768747 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 61, 27

Conread position: 47-378
Cow position: chr12:11836392-11836050 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 61, 27

Conread position: 47-379
Cow position: chr12:33129418-33129086 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 28

Conread position: 47-380
Cow position: chr12:40910121-40910474 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 61, 27

Conread position: 48-228
Cow position: chr12:28131754-28131567 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 18

Conread position: 48-277
Cow position: chr12:12233044-12232810 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 26

Conread position: 48-278
Cow position: chr12:11660090-11659856 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 26

Conread position: 48-369
Cow position: chr12:6410573-6410906 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 26

Conread position: 49-193
Cow position: chr12:20637376-20637520 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 25

Conread position: 49-198
Cow position: chr12:18978848-18978698 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 25

Conread position: 49-246
Cow position: chr12:29731473-29731274 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 25

Conread position: 49-256
Cow position: chr12:2734749-2734958 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 25

Conread position: 49-278
Cow position: chr12:17252041-17252270 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 59, 27

Conread position: 49-321
Cow position: chr12:19261357-19261074 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 25

Conread position: 49-339
Cow position: chr12:15050463-15050759 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 25

Conread position: 49-380
Cow position: chr12:30170814-30170483 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 50-195
Cow position: chr12:24533653-24533802 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 24

Conread position: 50-208
Cow position: chr12:14987961-14987800 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 24

Conread position: 50-236
Cow position: chr12:40309473-40309292 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 24

Conread position: 50-271
Cow position: chr12:24273211-24273424 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 58, 24

Conread position: 50-273
Cow position: chr12:9130064-9129842 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 25

Conread position: 50-276
Cow position: chr12:6688046-6687824 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 75

Conread position: 50-317
Cow position: chr12:4341574-4341860 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 24

Conread position: 50-343
Cow position: chr12:17080427-17080114 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 24

Conread position: 50-343
Cow position: chr12:24023650-24023941 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 24

Conread position: 50-366
Cow position: chr12:17879144-17879474 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 60, 24

Conread position: 50-366
Cow position: chr12:38774084-38774411 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 58, 24

Conread position: 50-369
Cow position: chr12:9482141-9482472 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 24

Conread position: 50-374
Cow position: chr12:17882016-17881683 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 24

Conread position: 50-379
Cow position: chr12:27802897-27803230 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 24

Conread position: 51-269
Cow position: chr12:45039267-45039043 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 23

Conread position: 51-374
Cow position: chr12:30806013-30805675 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 53-274
Cow position: chr12:33949058-33948836 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 21

Conread position: 53-280
Cow position: chr12:3616141-3615928 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 21

Conread position: 53-343
Cow position: chr12:36500789-36501090 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 25

Conread position: 56-239
Cow position: chr12:6465369-6465543 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 20

Conread position: 56-261
Cow position: chr12:25814312-25814092 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 18

Conread position: 56-275
Cow position: chr12:45069229-45069455 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 18

Conread position: 56-324
Cow position: chr12:37256173-37255900 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 18

Conread position: 56-339
Cow position: chr12:22485968-22485677 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 42, 19

Conread position: 56-343
Cow position: chr12:27563224-27563523 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 18

Conread position: 56-348
Cow position: chr12:26576047-26575734 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 52, 18

Conread position: 56-352
Cow position: chr12:11587924-11587618 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 18

Conread position: 56-360
Cow position: chr12:42879854-42879530 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 56-360
Cow position: chr12:48415365-48415682 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 52, 18

Conread position: 56-363
Cow position: chr12:24116218-24116528 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 152, 18

Conread position: 56-366
Cow position: chr12:32169701-32169369 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 56-369
Cow position: chr12:15703340-15703671 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 19

Conread position: 56-380
Cow position: chr12:9914936-9914602 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 147, 18

Conread position: 57-343
Cow position: chr12:3623845-3623548 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 17

Conread position: 58-276
Cow position: chr12:24181296-24181078 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 18

Conread position: 58-302
Cow position: chr12:23939372-23939120 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 16

Conread position: 58-355
Cow position: chr12:35669319-35669633 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 16

Conread position: 59-277
Cow position: chr12:26777042-26777260 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 15

Conread position: 60-247
Cow position: chr12:44542414-44542225 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 14

Conread position: 60-272
Cow position: chr12:3371397-3371608 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 14

Conread position: 64-374
Cow position: chr12:25917126-25917442 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 7, 98

Conread position: 65-318
Cow position: chr12:5631736-5632003 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 36

Conread position: 66-225
Cow position: chr12:12179208-12179046 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 8

Conread position: 66-366
Cow position: chr12:15122470-15122149 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 8

Conread position: 66-374
Cow position: chr12:30194838-30194527 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 8

Conread position: 67-374
Cow position: chr12:24211551-24211241 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 139

Conread position: 71-185
Cow position: chr12:17622285-17622395 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 52

Conread position: 71-251
Cow position: chr12:38552334-38552155 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 88

Conread position: 71-276
Cow position: chr12:29357924-29358122 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 135

Conread position: 71-355
Cow position: chr12:24663261-24662957 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 232

Conread position: 71-374
Cow position: chr12:23574911-23574591 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 249

Conread position: 72-367
Cow position: chr12:6484268-6483982 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 36, 49

Conread position: 73-342
Cow position: chr12:4866953-4866677 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 60

Conread position: 77-369
Cow position: chr12:37771001-37770702 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 31, 19

Conread position: 78-369
Cow position: chr12:35124025-35123718 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 5

Conread position: 83-256
Cow position: chr12:1767038-1766862 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 83-278
Cow position: chr12:31532277-31532472 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 36

Conread position: 83-369
Cow position: chr12:11057000-11056706 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 25, 40

Conread position: 83-369
Cow position: chr12:33323365-33323669 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 25, 292

Conread position: 83-374
Cow position: chr12:30661820-30662128 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 213

Conread position: 86-338
Cow position: chr12:7299335-7299602 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 86-369
Cow position: chr12:4008154-4008451 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 172

Conread position: 87-363
Cow position: chr12:42167756-42167480 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 73

Conread position: 88-366
Cow position: chr12:6720444-6720152 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 9, 16

Conread position: 91-352
Cow position: chr12:42254790-42254513 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 154

Conread position: 91-376
Cow position: chr12:18765855-18766159 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 26

Conread position: 93-380
Cow position: chr12:7000485-7000790 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 82

Conread position: 100-298
Cow position: chr12:27357493-27357300 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 29

Conread position: 100-369
Cow position: chr12:41159702-41159418 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 206

Conread position: 104-238
Cow position: chr12:16434772-16434904 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 18

Conread position: 104-242
Cow position: chr12:19371790-19371926 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 34

Conread position: 107-274
Cow position: chr12:6235391-6235219 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 107-343
Cow position: chr12:3197373-3197130 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 224

Conread position: 115-339
Cow position: chr12:30753814-30753581 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 115-369
Cow position: chr12:6485119-6485381 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 26, 17

Conread position: 116-253
Cow position: chr12:24186399-24186529 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 116-271
Cow position: chr12:4797393-4797235 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 116-380
Cow position: chr12:29995373-29995645 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 16

Conread position: 117-271
Cow position: chr12:15260854-15260698 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 40

Conread position: 117-343
Cow position: chr12:3950255-3950491 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 15

Conread position: 117-369
Cow position: chr12:15163232-15162976 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 16, 108

Conread position: 118-343
Cow position: chr12:18943566-18943804 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 118-369
Cow position: chr12:12304472-12304217 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 11, 99

Conread position: 118-380
Cow position: chr12:37993642-37993908 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 90, 14

Conread position: 121-374
Cow position: chr12:23798186-23797929 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 19

Conread position: 122-240
Cow position: chr12:20543795-20543916 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 122-352
Cow position: chr12:2711585-2711342 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 103

Conread position: 122-374
Cow position: chr12:25452363-25452623 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 14

Conread position: 123-379
Cow position: chr12:44517651-44517920 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 212

Conread position: 124-248
Cow position: chr12:27572154-27572282 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 124-271
Cow position: chr12:34195624-34195772 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 124-272
Cow position: chr12:7920326-7920176 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 8

Conread position: 124-275
Cow position: chr12:33319582-33319735 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 141

Conread position: 124-277
Cow position: chr12:15641022-15641178 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 84, 147

Conread position: 124-302
Cow position: chr12:19274314-19274489 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 50

Conread position: 124-322
Cow position: chr12:45820282-45820493 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 87, 13

Conread position: 124-352
Cow position: chr12:41581199-41580964 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 80

Conread position: 124-364
Cow position: chr12:6210073-6210326 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 209

Conread position: 124-366
Cow position: chr12:7311466-7311231 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 169

Conread position: 124-369
Cow position: chr12:27037364-27037619 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 188

Conread position: 124-373
Cow position: chr12:31228658-31228396 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 40

Conread position: 124-374
Cow position: chr12:15531139-15530879 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 56

Conread position: 124-374
Cow position: chr12:32715130-32714865 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 112

Conread position: 124-374
Cow position: chr12:41474175-41473912 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 124-380
Cow position: chr12:29770495-29770756 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 150, 8

Conread position: 125-267
Cow position: chr12:30819328-30819183 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 125-327
Cow position: chr12:30605081-30605294 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 62

Conread position: 125-351
Cow position: chr12:17774879-17774646 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 39

Conread position: 125-366
Cow position: chr12:2813314-2813055 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 125-369
Cow position: chr12:19691151-19691408 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 7

Conread position: 125-369
Cow position: chr12:25177515-25177757 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 97, 7

Conread position: 125-380
Cow position: chr12:31959966-31959710 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 88

Conread position: 126-367
Cow position: chr12:31517088-31517341 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 208

Conread position: 127-280
Cow position: chr12:33729564-33729726 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 127-374
Cow position: chr12:38454989-38454738 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 58

Conread position: 136-373
Cow position: chr12:5940414-5940169 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 72, 139

Conread position: 137-272
Cow position: chr12:4793269-4793131 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 137-282
Cow position: chr12:46463998-46464143 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 25

Conread position: 137-337
Cow position: chr12:42234131-42233918 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 18

Conread position: 137-337
Cow position: chr12:47193952-47194154 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 73

Conread position: 137-350
Cow position: chr12:15173895-15173672 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 162

Conread position: 137-355
Cow position: chr12:41215813-41216044 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 79

Conread position: 137-364
Cow position: chr12:5906128-5905886 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 137-365
Cow position: chr12:7978109-7977872 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 137-366
Cow position: chr12:17001330-17001091 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 137-366
Cow position: chr12:25444986-25444753 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 125

Conread position: 137-369
Cow position: chr12:25320986-25320748 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 79

Conread position: 137-374
Cow position: chr12:29483814-29484069 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 137-374
Cow position: chr12:29969651-29969401 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 212

Conread position: 137-378
Cow position: chr12:23855904-23855652 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 140, 25

Conread position: 137-380
Cow position: chr12:29779842-29780085 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 154

Conread position: 137-380
Cow position: chr12:46333416-46333170 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 137, 25

Conread position: 139-267
Cow position: chr12:44916171-44916044 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 140-369
Cow position: chr12:6488924-6489158 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 77

Conread position: 140-374
Cow position: chr12:18020926-18020679 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 67, 159

Conread position: 140-380
Cow position: chr12:26222920-26223169 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 11, 108

Conread position: 142-339
Cow position: chr12:42174483-42174278 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 142-364
Cow position: chr12:28582443-28582673 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 21

Conread position: 142-369
Cow position: chr12:30438304-30438071 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 169

Conread position: 143-343
Cow position: chr12:38184659-38184451 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 19

Conread position: 143-374
Cow position: chr12:19507703-19507453 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 144-329
Cow position: chr12:3092515-3092705 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 145-374
Cow position: chr12:18963864-18964106 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 145-379
Cow position: chr12:8868818-8869061 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 128, 54

Conread position: 145-380
Cow position: chr12:44905691-44905458 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 158, 59

Conread position: 146-379
Cow position: chr12:35378264-35378021 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 65, 53

Conread position: 150-351
Cow position: chr12:5658018-5658223 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 124

Conread position: 152-373
Cow position: chr12:730883-731115 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 12

Conread position: 159-366
Cow position: chr12:34673290-34673511 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 141

Conread position: 171-374
Cow position: chr12:15240700-15240903 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 101

Conread position: 172-374
Cow position: chr12:18550918-18550703 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 182-366
Cow position: chr12:20326801-20326603 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 193-374
Cow position: chr12:26317481-26317284 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 222-374
Cow position: chr12:4116473-4116314 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 115

Show alignments to all cow chromosomes.