Cow genome map

Conread name: Mixc-0032,a01

Conread position: 4-369
Cow position: chrX:41526266-41526630 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 15

Conread position: 8-378
Cow position: chrX:7351572-7351181 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 274
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 7, 67

Conread position: 9-343
Cow position: chrX:42855730-42855374 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 35

Conread position: 10-232
Cow position: chrX:29681855-29682069 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 107, 19

Conread position: 10-377
Cow position: chrX:34565555-34565166 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 40, 66

Conread position: 15-247
Cow position: chrX:32867136-32866899 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 32, 9

Conread position: 17-363
Cow position: chrX:41871315-41870968 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 26

Conread position: 19-360
Cow position: chrX:47248538-47248884 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 247
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 13

Conread position: 22-208
Cow position: chrX:26881822-26882014 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 53

Conread position: 23-261
Cow position: chrX:31744759-31744995 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 6

Conread position: 24-380
Cow position: chrX:5118243-5118620 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 25-228
Cow position: chrX:23136985-23136785 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 50

Conread position: 25-272
Cow position: chrX:42331524-42331277 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 20

Conread position: 26-251
Cow position: chrX:20340406-20340623 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 48

Conread position: 27-244
Cow position: chrX:46079339-46079112 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 81, 47

Conread position: 27-272
Cow position: chrX:39290604-39290358 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 21

Conread position: 27-318
Cow position: chrX:27207047-27206753 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 49

Conread position: 27-365
Cow position: chrX:33539407-33539060 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 8, 52

Conread position: 27-374
Cow position: chrX:4399365-4399015 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 23

Conread position: 28-369
Cow position: chrX:45502382-45502043 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 182, 22

Conread position: 28-379
Cow position: chrX:27508775-27509139 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 21

Conread position: 29-208
Cow position: chrX:15100228-15100049 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 46

Conread position: 29-216
Cow position: chrX:41215574-41215380 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 47

Conread position: 29-279
Cow position: chrX:41941871-41941614 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 110, 21

Conread position: 29-335
Cow position: chrX:47649986-47650277 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 21

Conread position: 29-336
Cow position: chrX:13924106-13923798 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 17

Conread position: 29-339
Cow position: chrX:35885482-35885804 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 46

Conread position: 29-369
Cow position: chrX:15546132-15545784 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 47

Conread position: 29-369
Cow position: chrX:41878682-41879041 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 51

Conread position: 29-380
Cow position: chrX:5637930-5638285 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 46

Conread position: 30-229
Cow position: chrX:31983330-31983543 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 44

Conread position: 30-245
Cow position: chrX:23358870-23359085 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 19

Conread position: 30-280
Cow position: chrX:35276237-35275977 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 47

Conread position: 30-304
Cow position: chrX:19394799-19394512 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 78, 27

Conread position: 30-317
Cow position: chrX:5134726-5134420 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 48

Conread position: 30-351
Cow position: chrX:31250638-31250298 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 21

Conread position: 30-355
Cow position: chrX:38560799-38560462 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 28, 45

Conread position: 30-364
Cow position: chrX:34412096-34411738 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 30-369
Cow position: chrX:27145848-27145514 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 31-343
Cow position: chrX:47345576-47345253 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 77, 19

Conread position: 31-380
Cow position: chrX:4403564-4403196 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 77, 19

Conread position: 31-380
Cow position: chrX:31729686-31729325 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 45

Conread position: 32-215
Cow position: chrX:1102261-1102076 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 43

Conread position: 32-219
Cow position: chrX:47100348-47100541 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 42

Conread position: 32-224
Cow position: chrX:11529586-11529394 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 44

Conread position: 32-232
Cow position: chrX:27442293-27442500 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 18

Conread position: 32-254
Cow position: chrX:20345699-20345470 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 44

Conread position: 32-261
Cow position: chrX:4559981-4559749 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 43

Conread position: 32-261
Cow position: chrX:19717759-19717532 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 44

Conread position: 32-261
Cow position: chrX:39179982-39180223 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 153

Conread position: 32-278
Cow position: chrX:35659046-35658794 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 234

Conread position: 32-279
Cow position: chrX:42894167-42893915 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 17

Conread position: 32-312
Cow position: chrX:20957483-20957198 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 33

Conread position: 32-322
Cow position: chrX:23562115-23561801 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 76, 14

Conread position: 32-339
Cow position: chrX:4152798-4153112 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 38

Conread position: 32-343
Cow position: chrX:42492271-42492594 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 46

Conread position: 32-343
Cow position: chrX:44040424-44040119 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 43

Conread position: 32-343
Cow position: chrX:45977171-45976841 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 43

Conread position: 32-343
Cow position: chrX:46588069-46587739 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 45

Conread position: 32-352
Cow position: chrX:27261434-27261099 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 76, 25

Conread position: 32-355
Cow position: chrX:12095525-12095869 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 42

Conread position: 32-355
Cow position: chrX:31436718-31436383 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 29

Conread position: 32-360
Cow position: chrX:46291384-46291038 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 33

Conread position: 32-366
Cow position: chrX:8869159-8869508 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 17

Conread position: 32-369
Cow position: chrX:5919731-5919387 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 13

Conread position: 32-374
Cow position: chrX:11656324-11655978 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 32-374
Cow position: chrX:13177237-13177579 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 43

Conread position: 32-374
Cow position: chrX:34315776-34315411 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 41

Conread position: 32-374
Cow position: chrX:41027404-41027043 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 23

Conread position: 32-380
Cow position: chrX:8925929-8925583 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 45

Conread position: 32-381
Cow position: chrX:34532757-34532400 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 43

Conread position: 33-230
Cow position: chrX:42875454-42875253 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 75, 41

Conread position: 33-278
Cow position: chrX:26205213-26205455 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 30

Conread position: 33-318
Cow position: chrX:45968382-45968098 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 75, 41

Conread position: 33-366
Cow position: chrX:34554968-34554618 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 17

Conread position: 33-369
Cow position: chrX:30337711-30338051 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 17

Conread position: 33-374
Cow position: chrX:12979588-12979941 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 33-380
Cow position: chrX:30133077-30133444 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 43

Conread position: 34-180
Cow position: chrX:42216393-42216537 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 15

Conread position: 34-190
Cow position: chrX:37177110-37176958 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 15

Conread position: 34-195
Cow position: chrX:47979543-47979376 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 41

Conread position: 34-196
Cow position: chrX:32747968-32747810 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 34

Conread position: 34-209
Cow position: chrX:41011134-41010963 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 40

Conread position: 34-218
Cow position: chrX:1101793-1101614 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 16

Conread position: 34-231
Cow position: chrX:47191076-47191275 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 42

Conread position: 34-252
Cow position: chrX:5026495-5026275 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 52, 40

Conread position: 34-316
Cow position: chrX:35986058-35985764 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 34-319
Cow position: chrX:40108270-40108573 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 74, 16

Conread position: 34-343
Cow position: chrX:17949247-17949568 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 41

Conread position: 34-343
Cow position: chrX:40826503-40826832 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 43

Conread position: 34-351
Cow position: chrX:12290962-12290640 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 40

Conread position: 34-351
Cow position: chrX:27446927-27446608 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 74, 40

Conread position: 34-357
Cow position: chrX:11633927-11633585 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 41

Conread position: 34-364
Cow position: chrX:33001144-33000799 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 43

Conread position: 34-366
Cow position: chrX:4750094-4750410 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 40

Conread position: 34-369
Cow position: chrX:42087070-42086756 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 41

Conread position: 34-369
Cow position: chrX:45429787-45430125 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 28

Conread position: 34-374
Cow position: chrX:25207620-25207957 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 16

Conread position: 34-374
Cow position: chrX:27431679-27432028 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 35-192
Cow position: chrX:43028473-43028314 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 40

Conread position: 35-239
Cow position: chrX:14925514-14925308 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 21

Conread position: 35-242
Cow position: chrX:46910053-46909844 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 41

Conread position: 35-256
Cow position: chrX:35392062-35392279 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 39

Conread position: 35-270
Cow position: chrX:2936196-2935958 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 39

Conread position: 35-271
Cow position: chrX:24633929-24633684 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 73, 39

Conread position: 35-304
Cow position: chrX:11325867-11326140 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 14

Conread position: 35-339
Cow position: chrX:22115073-22115394 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 35-364
Cow position: chrX:17795222-17794879 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 73, 34

Conread position: 35-369
Cow position: chrX:34504810-34505156 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 40

Conread position: 35-371
Cow position: chrX:15231416-15231771 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 35

Conread position: 36-247
Cow position: chrX:51660-51872 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 38

Conread position: 36-255
Cow position: chrX:20583899-20583682 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 14

Conread position: 36-255
Cow position: chrX:31480203-31479987 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 72, 18

Conread position: 36-261
Cow position: chrX:35285413-35285183 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 19

Conread position: 36-271
Cow position: chrX:27668723-27668958 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 14

Conread position: 36-275
Cow position: chrX:42449769-42450019 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 40

Conread position: 36-305
Cow position: chrX:4289676-4289398 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 39

Conread position: 36-319
Cow position: chrX:12437041-12437327 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 38

Conread position: 36-324
Cow position: chrX:22284079-22283784 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 12

Conread position: 36-339
Cow position: chrX:4632612-4632926 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 39

Conread position: 36-343
Cow position: chrX:6559215-6559526 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 145, 14

Conread position: 36-343
Cow position: chrX:16575343-16575042 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 40

Conread position: 36-351
Cow position: chrX:29050484-29050156 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 36-364
Cow position: chrX:41674339-41674005 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 14

Conread position: 36-369
Cow position: chrX:9650787-9651134 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 20

Conread position: 36-369
Cow position: chrX:15146957-15147298 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 72, 38

Conread position: 36-375
Cow position: chrX:42927589-42927934 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 14

Conread position: 36-380
Cow position: chrX:10411736-10412103 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 312

Conread position: 36-380
Cow position: chrX:44961997-44961628 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 38

Conread position: 37-223
Cow position: chrX:48372261-48372442 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 37

Conread position: 37-235
Cow position: chrX:17744862-17744667 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 71, 37

Conread position: 37-243
Cow position: chrX:40046327-40046547 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 37-251
Cow position: chrX:40337151-40336931 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 13

Conread position: 37-343
Cow position: chrX:24365581-24365906 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 37

Conread position: 37-343
Cow position: chrX:27705828-27705506 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 53, 37

Conread position: 37-352
Cow position: chrX:47186086-47186409 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 71, 17

Conread position: 37-357
Cow position: chrX:3654844-3654513 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 38

Conread position: 37-374
Cow position: chrX:3580186-3579830 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 37

Conread position: 38-343
Cow position: chrX:33654600-33654922 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 39

Conread position: 38-351
Cow position: chrX:31515410-31515080 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 17

Conread position: 38-379
Cow position: chrX:29601591-29601949 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 39-325
Cow position: chrX:20677904-20678196 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 11

Conread position: 40-228
Cow position: chrX:37751871-37752063 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 36

Conread position: 40-235
Cow position: chrX:27170972-27170779 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 138, 25

Conread position: 40-374
Cow position: chrX:9425523-9425854 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 222
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 35

Conread position: 40-374
Cow position: chrX:37780872-37781225 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 41-272
Cow position: chrX:27074814-27075052 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 67, 33

Conread position: 42-280
Cow position: chrX:3806915-3806674 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 17, 33

Conread position: 42-366
Cow position: chrX:37575054-37574745 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 7, 34

Conread position: 42-369
Cow position: chrX:11614911-11614590 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 66, 32

Conread position: 43-223
Cow position: chrX:6480361-6480545 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 65, 7

Conread position: 43-239
Cow position: chrX:37749758-37749951 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 23

Conread position: 43-256
Cow position: chrX:908175-907961 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 7

Conread position: 43-278
Cow position: chrX:30672148-30672403 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 32

Conread position: 43-280
Cow position: chrX:27306673-27306443 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 164, 7

Conread position: 43-293
Cow position: chrX:32208592-32208840 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 31

Conread position: 43-337
Cow position: chrX:19469283-19469575 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 13

Conread position: 43-374
Cow position: chrX:29541993-29542333 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 65, 31

Conread position: 43-374
Cow position: chrX:38094291-38094637 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 31

Conread position: 43-374
Cow position: chrX:42246947-42247299 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 7

Conread position: 44-217
Cow position: chrX:40649136-40648952 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 30

Conread position: 44-245
Cow position: chrX:7910839-7911046 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 22

Conread position: 45-198
Cow position: chrX:231793-231942 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 29

Conread position: 45-202
Cow position: chrX:3494815-3494973 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 31

Conread position: 45-219
Cow position: chrX:17525644-17525811 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 29

Conread position: 45-219
Cow position: chrX:39642393-39642567 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 31

Conread position: 45-228
Cow position: chrX:12212898-12212718 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 30

Conread position: 45-235
Cow position: chrX:41166596-41166789 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 29

Conread position: 45-236
Cow position: chrX:5487715-5487897 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 29

Conread position: 45-259
Cow position: chrX:38302047-38301821 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 29

Conread position: 45-261
Cow position: chrX:16323782-16324004 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 29

Conread position: 45-261
Cow position: chrX:19018594-19018821 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 30

Conread position: 45-267
Cow position: chrX:17524150-17524380 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 29

Conread position: 45-271
Cow position: chrX:4467184-4466967 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 29

Conread position: 45-273
Cow position: chrX:6599541-6599784 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 63, 29

Conread position: 45-273
Cow position: chrX:34420970-34420732 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 30

Conread position: 45-277
Cow position: chrX:32574549-32574311 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 17

Conread position: 45-278
Cow position: chrX:22392754-22392993 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 30

Conread position: 45-278
Cow position: chrX:45699746-45699979 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 30

Conread position: 45-279
Cow position: chrX:38587612-38587851 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 29

Conread position: 45-280
Cow position: chrX:42432284-42432521 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 11

Conread position: 45-298
Cow position: chrX:24749320-24749053 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 29

Conread position: 45-299
Cow position: chrX:28940477-28940211 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-304
Cow position: chrX:2523467-2523718 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 164, 24

Conread position: 45-335
Cow position: chrX:1087915-1088209 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 65, 29

Conread position: 45-339
Cow position: chrX:45110884-45110579 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 63, 29

Conread position: 45-343
Cow position: chrX:6414266-6413967 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 30

Conread position: 45-343
Cow position: chrX:45649105-45648792 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 31

Conread position: 45-354
Cow position: chrX:35224509-35224202 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 166, 30

Conread position: 45-358
Cow position: chrX:34836839-34837152 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-365
Cow position: chrX:34377172-34376842 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-365
Cow position: chrX:39938305-39938625 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 24

Conread position: 45-366
Cow position: chrX:40685096-40685437 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-369
Cow position: chrX:6407779-6407440 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 31

Conread position: 45-369
Cow position: chrX:6544478-6544147 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-369
Cow position: chrX:7278139-7277810 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 24

Conread position: 45-369
Cow position: chrX:13191333-13191653 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 216
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 25

Conread position: 45-369
Cow position: chrX:35269089-35268773 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 29

Conread position: 45-369
Cow position: chrX:35413827-35413511 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 29

Conread position: 45-371
Cow position: chrX:29230240-29229899 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 29

Conread position: 45-374
Cow position: chrX:7695996-7695634 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 45-374
Cow position: chrX:20339660-20340002 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 31

Conread position: 45-374
Cow position: chrX:20584545-20584210 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 29

Conread position: 45-374
Cow position: chrX:27175235-27174881 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 31

Conread position: 45-374
Cow position: chrX:31442606-31442936 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 29

Conread position: 45-374
Cow position: chrX:38853444-38853084 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 63, 29

Conread position: 45-374
Cow position: chrX:40035209-40035556 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 19

Conread position: 45-374
Cow position: chrX:43115382-43115037 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 63, 29

Conread position: 45-379
Cow position: chrX:11938720-11939046 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 29

Conread position: 45-380
Cow position: chrX:23497464-23497788 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 63, 29

Conread position: 45-380
Cow position: chrX:41123278-41122947 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 187, 25

Conread position: 46-213
Cow position: chrX:35029704-35029865 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 62, 18

Conread position: 46-227
Cow position: chrX:20666670-20666857 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 28

Conread position: 46-231
Cow position: chrX:40556231-40556417 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 62, 28

Conread position: 46-235
Cow position: chrX:27415355-27415544 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 29

Conread position: 46-239
Cow position: chrX:48822110-48822310 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 28

Conread position: 46-251
Cow position: chrX:24425769-24425982 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 23

Conread position: 46-256
Cow position: chrX:29467549-29467763 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 29

Conread position: 46-272
Cow position: chrX:38726912-38727135 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 129, 28

Conread position: 46-274
Cow position: chrX:32942848-32943079 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 60, 28

Conread position: 46-299
Cow position: chrX:17956921-17956660 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 28

Conread position: 46-306
Cow position: chrX:22284915-22284667 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 28

Conread position: 46-343
Cow position: chrX:34314253-34313948 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 46-366
Cow position: chrX:37072618-37072302 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 28

Conread position: 46-374
Cow position: chrX:4996821-4996487 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 42, 23

Conread position: 46-374
Cow position: chrX:13913307-13912965 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 28

Conread position: 46-374
Cow position: chrX:23513769-23514129 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 8, 16

Conread position: 46-374
Cow position: chrX:33854993-33855347 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 30

Conread position: 46-376
Cow position: chrX:34792091-34792424 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 28

Conread position: 46-380
Cow position: chrX:36976182-36975831 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 62, 10

Conread position: 47-195
Cow position: chrX:31279696-31279845 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 27

Conread position: 47-219
Cow position: chrX:18812327-18812165 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 27

Conread position: 47-228
Cow position: chrX:46068533-46068716 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 21

Conread position: 47-234
Cow position: chrX:41858653-41858845 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 27

Conread position: 47-254
Cow position: chrX:47855207-47854998 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 9

Conread position: 47-318
Cow position: chrX:4109416-4109134 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 28

Conread position: 47-322
Cow position: chrX:4825617-4825880 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 47-351
Cow position: chrX:36356335-36356026 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 27

Conread position: 47-352
Cow position: chrX:1466394-1466069 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 27

Conread position: 47-374
Cow position: chrX:1499885-1499551 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 61, 27

Conread position: 47-374
Cow position: chrX:26881331-26881682 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 47-374
Cow position: chrX:38218944-38218597 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 61, 27

Conread position: 48-269
Cow position: chrX:19761979-19761756 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 21

Conread position: 49-190
Cow position: chrX:40108115-40108259 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 25

Conread position: 49-270
Cow position: chrX:12972907-12972682 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 60, 25

Conread position: 49-270
Cow position: chrX:16836065-16836285 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 25

Conread position: 49-272
Cow position: chrX:16984864-16984640 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 25

Conread position: 49-272
Cow position: chrX:23335746-23335973 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 25

Conread position: 49-272
Cow position: chrX:42480056-42479832 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 25

Conread position: 49-339
Cow position: chrX:161629-161336 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 59, 25

Conread position: 49-343
Cow position: chrX:25035152-25035460 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 25

Conread position: 49-343
Cow position: chrX:40680844-40680530 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 25

Conread position: 49-351
Cow position: chrX:46532261-46532589 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 59, 25

Conread position: 49-358
Cow position: chrX:31489750-31489425 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 25

Conread position: 49-374
Cow position: chrX:9201772-9201436 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 49-376
Cow position: chrX:42380883-42381218 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 25

Conread position: 49-380
Cow position: chrX:38964326-38963985 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 103, 25

Conread position: 50-202
Cow position: chrX:11589139-11589295 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 24

Conread position: 50-208
Cow position: chrX:14135903-14135744 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 24

Conread position: 50-227
Cow position: chrX:25232210-25232044 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 25

Conread position: 50-228
Cow position: chrX:35409980-35409795 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 24

Conread position: 50-230
Cow position: chrX:23471640-23471825 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 24

Conread position: 50-243
Cow position: chrX:2314390-2314591 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 24

Conread position: 50-278
Cow position: chrX:11762783-11763007 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 24

Conread position: 50-279
Cow position: chrX:13122172-13121930 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 24

Conread position: 50-279
Cow position: chrX:39353000-39352777 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 24

Conread position: 50-299
Cow position: chrX:23089063-23088829 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 232, 20

Conread position: 50-314
Cow position: chrX:18964606-18964876 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 52, 24

Conread position: 50-335
Cow position: chrX:4268842-4269134 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 24

Conread position: 50-343
Cow position: chrX:918501-918808 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 24

Conread position: 50-343
Cow position: chrX:41238134-41238432 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 58, 25

Conread position: 50-343
Cow position: chrX:44055031-44054726 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 58, 24

Conread position: 50-369
Cow position: chrX:7722202-7721880 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 25

Conread position: 50-369
Cow position: chrX:10251974-10252290 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 24

Conread position: 50-369
Cow position: chrX:38549675-38549343 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 307

Conread position: 50-374
Cow position: chrX:9251935-9252272 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 24

Conread position: 50-374
Cow position: chrX:24332005-24331664 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 24

Conread position: 50-381
Cow position: chrX:46072602-46072941 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 24

Conread position: 51-236
Cow position: chrX:34991588-34991399 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 23

Conread position: 51-259
Cow position: chrX:43011916-43012136 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 23

Conread position: 51-351
Cow position: chrX:20168782-20168469 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 23

Conread position: 51-374
Cow position: chrX:6488792-6488462 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 67, 23

Conread position: 52-394
Cow position: chrX:38654206-38654562 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 22

Conread position: 53-198
Cow position: chrX:43059031-43059175 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 21

Conread position: 53-272
Cow position: chrX:29478947-29478723 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 21

Conread position: 53-355
Cow position: chrX:10516479-10516161 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 21

Conread position: 54-363
Cow position: chrX:12309161-12309489 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 22

Conread position: 56-201
Cow position: chrX:4486802-4486951 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 18

Conread position: 56-202
Cow position: chrX:25420546-25420403 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 66

Conread position: 56-219
Cow position: chrX:6640646-6640482 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 18

Conread position: 56-228
Cow position: chrX:35681789-35681610 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 18

Conread position: 56-241
Cow position: chrX:8327127-8326934 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 19

Conread position: 56-256
Cow position: chrX:45759891-45759693 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 18

Conread position: 56-261
Cow position: chrX:44991195-44991403 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 18

Conread position: 56-266
Cow position: chrX:1122325-1122538 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 18

Conread position: 56-276
Cow position: chrX:11653989-11653760 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 18

Conread position: 56-342
Cow position: chrX:39220310-39220000 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 13

Conread position: 56-374
Cow position: chrX:22075017-22074686 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 56-374
Cow position: chrX:22482467-22482800 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 18

Conread position: 56-374
Cow position: chrX:35382820-35383130 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 18

Conread position: 56-374
Cow position: chrX:44397233-44396905 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 18

Conread position: 56-379
Cow position: chrX:30420745-30421048 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 18

Conread position: 56-380
Cow position: chrX:15006937-15007268 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 19

Conread position: 56-380
Cow position: chrX:21986079-21986410 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 58-297
Cow position: chrX:38642462-38642216 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 16

Conread position: 58-362
Cow position: chrX:20881741-20882037 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 16

Conread position: 59-220
Cow position: chrX:44798832-44798997 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 10

Conread position: 59-272
Cow position: chrX:4645695-4645914 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 15

Conread position: 59-321
Cow position: chrX:20152067-20151812 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 49, 11

Conread position: 61-275
Cow position: chrX:42836398-42836178 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 13

Conread position: 61-350
Cow position: chrX:14973540-14973828 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 13

Conread position: 61-351
Cow position: chrX:32821257-32820941 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 9

Conread position: 61-369
Cow position: chrX:9634975-9635290 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 61-374
Cow position: chrX:34544003-34543672 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 13

Conread position: 62-214
Cow position: chrX:4366561-4366400 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 12

Conread position: 62-379
Cow position: chrX:1615839-1616163 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 61

Conread position: 66-202
Cow position: chrX:39419509-39419642 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 8

Conread position: 66-229
Cow position: chrX:25286510-25286679 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 8

Conread position: 66-276
Cow position: chrX:46069973-46070178 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 116, 8

Conread position: 66-280
Cow position: chrX:30840753-30840532 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 9

Conread position: 66-369
Cow position: chrX:4768940-4768635 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 9

Conread position: 66-380
Cow position: chrX:8731306-8730968 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 8

Conread position: 70-343
Cow position: chrX:28877957-28878250 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 70-343
Cow position: chrX:41192898-41192627 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 141, 37

Conread position: 71-256
Cow position: chrX:30824193-30824002 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 71-272
Cow position: chrX:45382853-45383047 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 45

Conread position: 71-343
Cow position: chrX:27228337-27228047 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 71-343
Cow position: chrX:41068928-41068640 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 37, 69

Conread position: 71-374
Cow position: chrX:31294361-31294671 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 37, 209

Conread position: 71-374
Cow position: chrX:35543092-35542781 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 135

Conread position: 71-378
Cow position: chrX:43779657-43779965 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 142, 37

Conread position: 72-279
Cow position: chrX:47061594-47061388 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 36, 58

Conread position: 72-322
Cow position: chrX:27511628-27511367 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 59

Conread position: 73-351
Cow position: chrX:47246553-47246836 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 73

Conread position: 74-374
Cow position: chrX:9365481-9365789 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 9

Conread position: 77-273
Cow position: chrX:47079830-47079625 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 80-374
Cow position: chrX:14275549-14275848 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 28, 60

Conread position: 81-366
Cow position: chrX:169343-169646 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 155

Conread position: 81-374
Cow position: chrX:13647586-13647899 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 83-256
Cow position: chrX:41862556-41862379 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 151

Conread position: 83-275
Cow position: chrX:23188593-23188783 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 50

Conread position: 84-325
Cow position: chrX:19097025-19097285 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 118

Conread position: 88-333
Cow position: chrX:22914857-22915107 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 27

Conread position: 88-339
Cow position: chrX:4515879-4515607 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 100

Conread position: 93-369
Cow position: chrX:17888244-17888523 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 178, 24

Conread position: 96-318
Cow position: chrX:32977908-32978133 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 44

Conread position: 99-343
Cow position: chrX:5135341-5135606 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 51

Conread position: 100-380
Cow position: chrX:31252587-31252300 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 89

Conread position: 109-351
Cow position: chrX:42873551-42873306 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 116

Conread position: 109-374
Cow position: chrX:11717619-11717898 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 94, 23

Conread position: 110-374
Cow position: chrX:38006603-38006878 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 40

Conread position: 114-369
Cow position: chrX:35387767-35388011 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 189, 134

Conread position: 115-343
Cow position: chrX:20697453-20697685 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 21

Conread position: 115-374
Cow position: chrX:42171138-42171410 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 12, 23

Conread position: 116-280
Cow position: chrX:37129426-37129259 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 16

Conread position: 116-299
Cow position: chrX:42160784-42160603 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 145

Conread position: 116-381
Cow position: chrX:34192815-34192554 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 75

Conread position: 117-373
Cow position: chrX:24424245-24424501 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 96, 15

Conread position: 117-374
Cow position: chrX:878222-878491 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 118-256
Cow position: chrX:23266573-23266430 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 118-369
Cow position: chrX:37910599-37910337 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 18

Conread position: 118-374
Cow position: chrX:31312188-31311915 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 121-339
Cow position: chrX:917215-917442 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 126

Conread position: 121-378
Cow position: chrX:42469788-42470059 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 90, 194

Conread position: 122-280
Cow position: chrX:23498525-23498686 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 122-348
Cow position: chrX:18272908-18273144 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 152, 18

Conread position: 122-366
Cow position: chrX:6690105-6690363 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 175

Conread position: 122-369
Cow position: chrX:4043716-4043961 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 151, 10

Conread position: 122-369
Cow position: chrX:7513639-7513405 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 126

Conread position: 122-374
Cow position: chrX:45846254-45845985 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 115

Conread position: 122-380
Cow position: chrX:18694777-18695043 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 90

Conread position: 124-261
Cow position: chrX:41164760-41164624 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 124-272
Cow position: chrX:31626828-31626975 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 85

Conread position: 124-272
Cow position: chrX:36848428-36848579 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 32

Conread position: 124-280
Cow position: chrX:40531892-40532053 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 124-281
Cow position: chrX:12191913-12191751 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 124-339
Cow position: chrX:23562781-23562558 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 8

Conread position: 124-343
Cow position: chrX:16348422-16348649 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 144, 28

Conread position: 124-351
Cow position: chrX:5679421-5679653 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 175

Conread position: 124-360
Cow position: chrX:7718985-7718756 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 31

Conread position: 124-365
Cow position: chrX:30543134-30543392 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 124-366
Cow position: chrX:43730071-43730324 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 115

Conread position: 124-366
Cow position: chrX:45113771-45113511 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 124-369
Cow position: chrX:13382476-13382220 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 82

Conread position: 124-374
Cow position: chrX:616109-616376 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 84, 0

Conread position: 124-378
Cow position: chrX:23092026-23091763 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 195

Conread position: 124-379
Cow position: chrX:618859-619123 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 84, 57

Conread position: 124-380
Cow position: chrX:11084914-11085175 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 19

Conread position: 124-383
Cow position: chrX:27393875-27394140 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 228

Conread position: 125-299
Cow position: chrX:29733441-29733620 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 155

Conread position: 125-328
Cow position: chrX:15820744-15820531 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 125-343
Cow position: chrX:29549402-29549628 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 138, 37

Conread position: 125-379
Cow position: chrX:34402156-34401879 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 126-271
Cow position: chrX:29501737-29501881 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 11

Conread position: 126-364
Cow position: chrX:45174999-45174745 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 219

Conread position: 127-280
Cow position: chrX:20743751-20743594 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 127-337
Cow position: chrX:5900612-5900394 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 86

Conread position: 127-355
Cow position: chrX:36514745-36514986 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 231

Conread position: 127-365
Cow position: chrX:45670368-45670122 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 14

Conread position: 127-366
Cow position: chrX:5017275-5017520 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 135, 46

Conread position: 127-366
Cow position: chrX:45414153-45414406 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 127-369
Cow position: chrX:29194378-29194125 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 99

Conread position: 127-379
Cow position: chrX:17726122-17725855 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 5

Conread position: 129-285
Cow position: chrX:17966486-17966322 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 129-369
Cow position: chrX:42235377-42235637 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 218

Conread position: 129-374
Cow position: chrX:7162202-7161946 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 130-374
Cow position: chrX:39415226-39415481 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 131-343
Cow position: chrX:47481938-47481721 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 9

Conread position: 131-369
Cow position: chrX:29121190-29120937 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 136-374
Cow position: chrX:39126464-39126219 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 162

Conread position: 137-253
Cow position: chrX:34508681-34508562 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 137-270
Cow position: chrX:19943099-19943233 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 57

Conread position: 137-272
Cow position: chrX:29553422-29553284 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 137-278
Cow position: chrX:4615874-4616018 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 25

Conread position: 137-322
Cow position: chrX:46429682-46429881 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 137-343
Cow position: chrX:5872454-5872240 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 137-343
Cow position: chrX:46433628-46433410 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 137-351
Cow position: chrX:6278361-6278588 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 222

Conread position: 137-364
Cow position: chrX:11073054-11073294 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 202

Conread position: 137-364
Cow position: chrX:48044379-48044618 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 22

Conread position: 137-366
Cow position: chrX:34503057-34502816 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 137-369
Cow position: chrX:1503464-1503229 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 73

Conread position: 137-369
Cow position: chrX:22387113-22387352 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 136, 69

Conread position: 137-369
Cow position: chrX:29680124-29680369 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 137-369
Cow position: chrX:33493913-33493669 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 137, 0

Conread position: 137-374
Cow position: chrX:17662461-17662707 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 130, 0

Conread position: 137-374
Cow position: chrX:37986362-37986119 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 139, 85

Conread position: 137-374
Cow position: chrX:38728871-38728623 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 137-380
Cow position: chrX:8797386-8797133 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 137, 73

Conread position: 138-369
Cow position: chrX:11082486-11082723 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 175

Conread position: 138-369
Cow position: chrX:38226974-38227204 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 32

Conread position: 140-245
Cow position: chrX:21573706-21573599 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 41

Conread position: 140-369
Cow position: chrX:40557545-40557790 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 140-374
Cow position: chrX:37232541-37232299 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 121

Conread position: 140-374
Cow position: chrX:40269626-40269374 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 0

Conread position: 141-241
Cow position: chrX:29331862-29331965 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 141-327
Cow position: chrX:25788772-25788961 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 133

Conread position: 141-355
Cow position: chrX:36068148-36067920 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 72, 0

Conread position: 141-366
Cow position: chrX:41884279-41884520 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 141-369
Cow position: chrX:39558216-39558459 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 47

Conread position: 142-280
Cow position: chrX:12082192-12082334 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 142-343
Cow position: chrX:7710407-7710619 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 143-343
Cow position: chrX:38066324-38066531 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 68, 0

Conread position: 143-358
Cow position: chrX:11851548-11851767 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 32

Conread position: 143-369
Cow position: chrX:29289708-29289471 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 19

Conread position: 143-369
Cow position: chrX:43568050-43567813 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 143-379
Cow position: chrX:1514288-1514526 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 134, 73

Conread position: 145-298
Cow position: chrX:29585248-29585086 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 145-315
Cow position: chrX:25328487-25328659 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 96

Conread position: 146-369
Cow position: chrX:19273579-19273831 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 0

Conread position: 147-355
Cow position: chrX:7572033-7571809 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 8

Conread position: 161-379
Cow position: chrX:7509252-7509023 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 107, 38

Conread position: 165-330
Cow position: chrX:41111825-41111653 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 165-374
Cow position: chrX:7646360-7646142 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 159

Conread position: 168-369
Cow position: chrX:27680504-27680290 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 164

Conread position: 174-351
Cow position: chrX:27685349-27685160 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 184

Conread position: 191-379
Cow position: chrX:13785280-13785482 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 193-374
Cow position: chrX:19003374-19003186 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 18

Conread position: 207-380
Cow position: chrX:19188995-19188817 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.