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Cow genome map

           
Conread name:
           
Mixc-0034c10
        

               
Conread position:
               
1-303
               

               
Cow position:
               
chr10:20391323-20391641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr10:48741044-48741381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr10:13586823-13586485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
31, 163
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr10:21447795-21448122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr10:49923255-49923584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr10:6720017-6719588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr10:31534849-31534435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr10:50360027-50359597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr10:54477215-54476790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr10:35901427-35901108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr10:65133058-65132643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
249, 20
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr10:49045955-49045527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 177
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr10:60446845-60446592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr10:61982501-61982208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr10:10120308-10120004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr10:13765049-13765390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 156
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr10:6505466-6505132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 174
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr10:9575934-9576268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr10:40163819-40164158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr10:45371172-45370826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr10:50182939-50183276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr10:20553297-20552910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr10:58259409-58259800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr10:15817680-15818097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr10:69934666-69935078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr10:22390711-22390281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr10:48462231-48462656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 5
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr10:54848892-54848462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr10:63940886-63940461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr10:56828205-56828638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr10:61922029-61922289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 149
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr10:38241194-38240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr10:25936345-25936018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr10:14947367-14947040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr10:20997177-20997508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr10:6852378-6851956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 176
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr10:69564715-69564296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr10:47690498-47690207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr10:35653772-35653468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr10:4184308-4183994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 166
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr10:2973975-2974317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr10:5151457-5151122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr10:11081077-11080729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 150
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr10:38942544-38942197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 185
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr10:49455981-49456305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr10:26209135-26209574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 146
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr10:6530299-6529886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr10:10048784-10048372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr10:22472439-22471997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 206
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr10:24732413-24731998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr10:37913075-37913492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
93, 210
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr10:24871276-24870845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 20
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chr10:33311375-33311558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 145
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr10:67581396-67581169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr10:14396546-14396769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr10:52881507-52881745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr10:13316050-13315806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 168
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr10:2538203-2537934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr10:22396366-22396057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr10:24375655-24375344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 135
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr10:44730366-44730697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr10:7817219-7816885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr10:46492882-46493229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr10:48257166-48257505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
95, 76
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr10:57142106-57142437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr10:11213226-11212885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr10:27749787-27749448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 158
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr10:668977-668654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr10:41802781-41803124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 104
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr10:13311847-13311503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr10:15115728-15115386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 158
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr10:22049366-22049024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr10:60961046-60960711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
6-357
               

               
Cow position:
               
chr10:48316836-48317206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 259
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr10:39228259-39227872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
90, 154
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr10:59663863-59664249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
6-395
               

               
Cow position:
               
chr10:14817053-14817464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
6-404
               

               
Cow position:
               
chr10:2304280-2304678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr10:16093320-16092903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr10:32503539-32503138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr10:66127963-66127544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 142
               

               
Conread position:
               
6-408
               

               
Cow position:
               
chr10:49846886-49846462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
102, 311
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr10:22616529-22616958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr10:29627855-29628268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
278, 113
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr10:77481-77074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
159, 21
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr10:9083410-9082983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr10:11009519-11009107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr10:31400788-31401214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr10:36002309-36001890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 153
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr10:42637344-42636915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
84, 307
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr10:61588149-61588575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 228
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr10:16598799-16598369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr10:41626704-41626289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr10:55122918-55122474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 21
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr10:39124244-39123996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 201
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr10:58935057-58935302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
7-246
               

               
Cow position:
               
chr10:15309292-15309535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 155
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr10:42123480-42123746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 169
               

               
Conread position:
               
7-266
               

               
Cow position:
               
chr10:16986442-16986171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 155
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chr10:37295562-37295839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
143, 112
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr10:24422063-24422340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
7-314
               

               
Cow position:
               
chr10:7291698-7292003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr10:30787516-30787832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:15868362-15868006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 154
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:19104073-19104405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:20372023-20372360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:24753255-24752927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:31779158-31779497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 155
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:35792036-35791704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
91, 146
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:38370343-38370691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:42313016-42312679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:45378892-45379237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
7-341
               

               
Cow position:
               
chr10:10148759-10148417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
146, 108
               

               
Conread position:
               
7-379
               

               
Cow position:
               
chr10:52296605-52296213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 20
               

               
Conread position:
               
7-379
               

               
Cow position:
               
chr10:57461466-57461081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
7-381
               

               
Cow position:
               
chr10:12919246-12919627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr10:28721887-28721481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr10:62286668-62286239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 180
               

               
Conread position:
               
7-409
               

               
Cow position:
               
chr10:43487825-43487399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 171
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:16645077-16645510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:18042294-18041864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 158
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:19372226-19372643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 154
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:19895505-19895084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 151
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:20132418-20132842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 154
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:31791150-31791573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:34660134-34660528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:35904732-35905146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:37014746-37014323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:40107210-40106801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:56683098-56683514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 163
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr10:59839180-59839607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 8
               

               
Conread position:
               
8-233
               

               
Cow position:
               
chr10:7383505-7383736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr10:23506382-23506714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 77
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr10:61839692-61839371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr10:63276501-63276162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
8-369
               

               
Cow position:
               
chr10:47543185-47542816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
96, 146
               

               
Conread position:
               
8-407
               

               
Cow position:
               
chr10:5543141-5543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 151
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr10:37512130-37512474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 173
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr10:38944366-38944033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 289
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr10:15318994-15318659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr10:16414466-16414815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr10:25882510-25882197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr10:50533760-50534102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
86, 173
               

               
Conread position:
               
9-366
               

               
Cow position:
               
chr10:63884048-63883701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 150
               

               
Conread position:
               
9-406
               

               
Cow position:
               
chr10:6489979-6489554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
9-406
               

               
Cow position:
               
chr10:24756520-24756122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
88, 166
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr10:10135096-10134661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr10:39109907-39110311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
10-336
               

               
Cow position:
               
chr10:36896511-36896176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
10-338
               

               
Cow position:
               
chr10:40906421-40906080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
102, 147
               

               
Conread position:
               
10-385
               

               
Cow position:
               
chr10:21082488-21082105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 151
               

               
Conread position:
               
10-403
               

               
Cow position:
               
chr10:64182551-64182142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr10:29102239-29102640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr10:30522954-30523372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr10:51306448-51306009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
91, 149
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr10:10751883-10752306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr10:58451269-58451513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr10:25342691-25342363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr10:35862122-35862459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
11-407
               

               
Cow position:
               
chr10:21657526-21657112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
11-410
               

               
Cow position:
               
chr10:31528076-31527678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
11-415
               

               
Cow position:
               
chr10:62353566-62353145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
12-302
               

               
Cow position:
               
chr10:33067471-33067760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 139
               

               
Conread position:
               
12-330
               

               
Cow position:
               
chr10:57059176-57059508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 118
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr10:30224787-30224370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
13-214
               

               
Cow position:
               
chr10:29526797-29526999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 142
               

               
Conread position:
               
14-336
               

               
Cow position:
               
chr10:2849451-2849126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
15-302
               

               
Cow position:
               
chr10:35778799-35779096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
15-335
               

               
Cow position:
               
chr10:23576648-23576315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
15-336
               

               
Cow position:
               
chr10:14098231-14098550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
16-247
               

               
Cow position:
               
chr10:55518803-55518577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
16-280
               

               
Cow position:
               
chr10:4164371-4164095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 145
               

               
Conread position:
               
16-336
               

               
Cow position:
               
chr10:721402-721070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 142
               

               
Conread position:
               
16-336
               

               
Cow position:
               
chr10:6235345-6235652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
16-336
               

               
Cow position:
               
chr10:37529162-37529498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
16-389
               

               
Cow position:
               
chr10:32584012-32583621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
16-407
               

               
Cow position:
               
chr10:34655005-34655424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 148
               

               
Conread position:
               
16-410
               

               
Cow position:
               
chr10:53674927-53674506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 192
               

               
Conread position:
               
18-155
               

               
Cow position:
               
chr10:50042702-50042558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
18-214
               

               
Cow position:
               
chr10:33084340-33084543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
18-255
               

               
Cow position:
               
chr10:33116850-33117098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
18-264
               

               
Cow position:
               
chr10:6384629-6384379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
18-287
               

               
Cow position:
               
chr10:67288390-67288117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
18-291
               

               
Cow position:
               
chr10:4109686-4109409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr10:45658244-45657960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
18-294
               

               
Cow position:
               
chr10:50134705-50134993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 21
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr10:19549389-19549681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
18-331
               

               
Cow position:
               
chr10:66194205-66194528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
18-334
               

               
Cow position:
               
chr10:3999008-3998678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
18-334
               

               
Cow position:
               
chr10:8404315-8403982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
18-335
               

               
Cow position:
               
chr10:28841057-28840725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
18-335
               

               
Cow position:
               
chr10:53247904-53248235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr10:6173433-6173131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr10:6436159-6435830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 141
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr10:10720575-10720905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr10:12315245-12314939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr10:24132724-24133049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr10:45728853-45729151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr10:50558825-50559156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr10:64285696-64286025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
18-337
               

               
Cow position:
               
chr10:9675364-9675686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 9
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr10:22341678-22341331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr10:28395202-28395526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 144
               

               
Conread position:
               
18-381
               

               
Cow position:
               
chr10:30352954-30352557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 175
               

               
Conread position:
               
18-381
               

               
Cow position:
               
chr10:51289348-51288968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
18-385
               

               
Cow position:
               
chr10:15871773-15872153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
18-385
               

               
Cow position:
               
chr10:23055980-23056369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
18-386
               

               
Cow position:
               
chr10:23912410-23912788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 137
               

               
Conread position:
               
18-386
               

               
Cow position:
               
chr10:47773827-47773453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
18-395
               

               
Cow position:
               
chr10:50015897-50016293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 207
               

               
Conread position:
               
18-395
               

               
Cow position:
               
chr10:58557274-58556895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
18-407
               

               
Cow position:
               
chr10:34430126-34430525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr10:2704296-2703907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr10:28670719-28671139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr10:34661226-34661635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
135, 68
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr10:34898068-34897682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr10:54948036-54948437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
73, 145
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr10:55733508-55733915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr10:57786440-57786021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
6, 144
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr10:59010034-59010457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
18-412
               

               
Cow position:
               
chr10:39387552-39387142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
18-417
               

               
Cow position:
               
chr10:29919739-29920156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr10:31373990-31374281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
19-332
               

               
Cow position:
               
chr10:67443022-67443330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
19-336
               

               
Cow position:
               
chr10:29252264-29251933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
19-336
               

               
Cow position:
               
chr10:36490120-36489790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
19-336
               

               
Cow position:
               
chr10:52278823-52278498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
19-386
               

               
Cow position:
               
chr10:15293364-15292978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr10:62219932-62219529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr10:51942886-51942596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 141
               

               
Conread position:
               
20-328
               

               
Cow position:
               
chr10:59571998-59571677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
20-336
               

               
Cow position:
               
chr10:25149990-25149674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
20-336
               

               
Cow position:
               
chr10:64042180-64041853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
20-369
               

               
Cow position:
               
chr10:32417450-32417091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
20-397
               

               
Cow position:
               
chr10:49146614-49146230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
40, 166
               

               
Conread position:
               
20-405
               

               
Cow position:
               
chr10:11966751-11967162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr10:1488932-1488531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr10:8093221-8093633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr10:10469065-10468663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 67
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr10:65345376-65345768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
77, 142
               

               
Conread position:
               
21-253
               

               
Cow position:
               
chr10:6664130-6663881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 166
               

               
Conread position:
               
21-280
               

               
Cow position:
               
chr10:55621758-55622018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
21-329
               

               
Cow position:
               
chr10:1996575-1996887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
21-401
               

               
Cow position:
               
chr10:54731108-54730707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 134
               

               
Conread position:
               
21-410
               

               
Cow position:
               
chr10:17176129-17175717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr10:15425145-15424954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
75, 135
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr10:48178442-48178243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 40
               

               
Conread position:
               
22-306
               

               
Cow position:
               
chr10:12486358-12486068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
22-336
               

               
Cow position:
               
chr10:24560897-24561216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
22-410
               

               
Cow position:
               
chr10:4311268-4310875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
175, 91
               

               
Conread position:
               
23-275
               

               
Cow position:
               
chr10:6532064-6532319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
77, 141
               

               
Conread position:
               
23-410
               

               
Cow position:
               
chr10:35796241-35796629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
23-410
               

               
Cow position:
               
chr10:56475563-56475153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 141
               

               
Conread position:
               
24-413
               

               
Cow position:
               
chr10:42454212-42453819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 111
               

               
Conread position:
               
25-242
               

               
Cow position:
               
chr10:45624064-45624284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 137
               

               
Conread position:
               
25-336
               

               
Cow position:
               
chr10:2449444-2449124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
17, 206
               

               
Conread position:
               
27-197
               

               
Cow position:
               
chr10:13918168-13918342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 128
               

               
Conread position:
               
27-267
               

               
Cow position:
               
chr10:17022477-17022723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
27-336
               

               
Cow position:
               
chr10:29166365-29166049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
27-336
               

               
Cow position:
               
chr10:29588750-29589069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
27-395
               

               
Cow position:
               
chr10:31362123-31362510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
27-410
               

               
Cow position:
               
chr10:50332684-50332277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
28-331
               

               
Cow position:
               
chr10:33732783-33733093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
28-336
               

               
Cow position:
               
chr10:35731438-35731755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
28-410
               

               
Cow position:
               
chr10:24745209-24744810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
73, 129
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr10:15426993-15427188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr10:31004933-31005140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
29-239
               

               
Cow position:
               
chr10:25913708-25913926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
29-243
               

               
Cow position:
               
chr10:6768635-6768844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
29-258
               

               
Cow position:
               
chr10:22633537-22633775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 125
               

               
Conread position:
               
29-273
               

               
Cow position:
               
chr10:30613915-30613673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 86
               

               
Conread position:
               
29-274
               

               
Cow position:
               
chr10:38376571-38376818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
29-293
               

               
Cow position:
               
chr10:52695638-52695914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
29-300
               

               
Cow position:
               
chr10:29339308-29339577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 129
               

               
Conread position:
               
29-302
               

               
Cow position:
               
chr10:45871603-45871322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
104, 84
               

               
Conread position:
               
29-309
               

               
Cow position:
               
chr10:9341647-9341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
29-333
               

               
Cow position:
               
chr10:37668068-37668387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
29-334
               

               
Cow position:
               
chr10:6038251-6038562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
29-334
               

               
Cow position:
               
chr10:59151776-59152090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
29-335
               

               
Cow position:
               
chr10:52113585-52113893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr10:1976229-1976549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 129
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr10:21424591-21424913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr10:29279534-29279213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr10:37415878-37415556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 131
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr10:44771738-44771427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
29-379
               

               
Cow position:
               
chr10:17844855-17844484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
68, 156
               

               
Conread position:
               
29-385
               

               
Cow position:
               
chr10:27828409-27828040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
29-386
               

               
Cow position:
               
chr10:7304654-7304280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 38
               

               
Conread position:
               
29-406
               

               
Cow position:
               
chr10:28776439-28776061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
69, 250
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr10:2613456-2613065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr10:37818469-37818875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr10:52046959-52046550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 158
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr10:59164019-59164400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
29-411
               

               
Cow position:
               
chr10:1088104-1087703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
30-288
               

               
Cow position:
               
chr10:64838941-64839196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
207, 39
               

               
Conread position:
               
30-381
               

               
Cow position:
               
chr10:49168947-49169343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
31-229
               

               
Cow position:
               
chr10:19098928-19098716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr10:8923366-8923045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
31-362
               

               
Cow position:
               
chr10:38513261-38512921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
31-379
               

               
Cow position:
               
chr10:25699736-25699381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
31-382
               

               
Cow position:
               
chr10:46184826-46184485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 127
               

               
Conread position:
               
31-410
               

               
Cow position:
               
chr10:1749671-1749261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
31-417
               

               
Cow position:
               
chr10:51696827-51696427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 128
               

               
Conread position:
               
33-336
               

               
Cow position:
               
chr10:23936561-23936254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 124
               

               
Conread position:
               
33-407
               

               
Cow position:
               
chr10:22527817-22528213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 127
               

               
Conread position:
               
34-256
               

               
Cow position:
               
chr10:25260331-25260105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
34-280
               

               
Cow position:
               
chr10:60237012-60237266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
60, 125
               

               
Conread position:
               
34-382
               

               
Cow position:
               
chr10:13390964-13391341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr10:22321606-22321211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr10:24763566-24763159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr10:39875070-39875451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 121
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr10:46195866-46195481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
35-334
               

               
Cow position:
               
chr10:53934670-53934968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
190, 79
               

               
Conread position:
               
37-291
               

               
Cow position:
               
chr10:11463587-11463850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
37-335
               

               
Cow position:
               
chr10:53357976-53357670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
37-365
               

               
Cow position:
               
chr10:28104999-28105343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 140
               

               
Conread position:
               
37-382
               

               
Cow position:
               
chr10:47789099-47788756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
37-395
               

               
Cow position:
               
chr10:10043027-10043391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
37-397
               

               
Cow position:
               
chr10:53973922-53973546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
37-397
               

               
Cow position:
               
chr10:68182874-68183232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 198
               

               
Conread position:
               
37-410
               

               
Cow position:
               
chr10:59675174-59675568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
58, 125
               

               
Conread position:
               
38-407
               

               
Cow position:
               
chr10:35752883-35753275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
38-408
               

               
Cow position:
               
chr10:35820540-35820925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 111
               

               
Conread position:
               
40-295
               

               
Cow position:
               
chr10:32834898-32834630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 124
               

               
Conread position:
               
40-331
               

               
Cow position:
               
chr10:28176310-28176617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
40-335
               

               
Cow position:
               
chr10:47412029-47412336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
40-336
               

               
Cow position:
               
chr10:38014443-38014144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
40-336
               

               
Cow position:
               
chr10:42745995-42745684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 121
               

               
Conread position:
               
40-406
               

               
Cow position:
               
chr10:51944439-51944051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 117
               

               
Conread position:
               
40-409
               

               
Cow position:
               
chr10:40420770-40421160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
47-267
               

               
Cow position:
               
chr10:37884727-37884953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 129
               

               
Conread position:
               
50-300
               

               
Cow position:
               
chr10:42892903-42893157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
50-410
               

               
Cow position:
               
chr10:35911692-35912062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
50-410
               

               
Cow position:
               
chr10:69544280-69544642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
51-336
               

               
Cow position:
               
chr10:38518561-38518860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
51-410
               

               
Cow position:
               
chr10:805256-804878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
53-306
               

               
Cow position:
               
chr10:13617589-13617839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
53-410
               

               
Cow position:
               
chr10:21462307-21461925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
54-336
               

               
Cow position:
               
chr10:38725718-38725431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
54-340
               

               
Cow position:
               
chr10:8077098-8077384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
57-411
               

               
Cow position:
               
chr10:24548310-24547942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
59-292
               

               
Cow position:
               
chr10:55849406-55849172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
59-335
               

               
Cow position:
               
chr10:53084228-53083937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr10:44817832-44817554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
61-406
               

               
Cow position:
               
chr10:60358772-60358421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
61-410
               

               
Cow position:
               
chr10:24307867-24308210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
64-329
               

               
Cow position:
               
chr10:38739587-38739330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
64-335
               

               
Cow position:
               
chr10:41254520-41254796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
64-400
               

               
Cow position:
               
chr10:35767036-35767384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
65-409
               

               
Cow position:
               
chr10:23886407-23886760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
66-410
               

               
Cow position:
               
chr10:10985452-10985807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
70-410
               

               
Cow position:
               
chr10:26731602-26731965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
71-323
               

               
Cow position:
               
chr10:58612588-58612834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
78-334
               

               
Cow position:
               
chr10:52589662-52589919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
83-336
               

               
Cow position:
               
chr10:65748970-65748729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
229, 13
               

               
Conread position:
               
83-410
               

               
Cow position:
               
chr10:65423883-65424227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
221, 13
               

               
Conread position:
               
87-408
               

               
Cow position:
               
chr10:19394573-19394894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
225, 9
               

               
Conread position:
               
88-336
               

               
Cow position:
               
chr10:5607661-5607415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
157, 75
               

               
Conread position:
               
90-407
               

               
Cow position:
               
chr10:33215818-33215484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
220, 0
               

               
Conread position:
               
91-233
               

               
Cow position:
               
chr10:12100533-12100674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
91-382
               

               
Cow position:
               
chr10:25479118-25478817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
92-410
               

               
Cow position:
               
chr10:39939421-39939745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 5
               

               
Conread position:
               
93-269
               

               
Cow position:
               
chr10:2202110-2202286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
154, 56
               

               
Conread position:
               
93-280
               

               
Cow position:
               
chr10:35856345-35856522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
93-302
               

               
Cow position:
               
chr10:22433898-22434114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
93-302
               

               
Cow position:
               
chr10:24781200-24780993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
93-304
               

               
Cow position:
               
chr10:39303835-39304046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 199
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr10:1428049-1427811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
211, 54
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr10:31027632-31027873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr10:54504616-54504373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr10:59588165-59588396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr10:28152367-28152613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
93-379
               

               
Cow position:
               
chr10:7366772-7367068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
93-385
               

               
Cow position:
               
chr10:33867387-33867667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
249, 45
               

               
Conread position:
               
93-386
               

               
Cow position:
               
chr10:35857050-35857346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 55
               

               
Conread position:
               
93-397
               

               
Cow position:
               
chr10:45770059-45769738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
93-397
               

               
Cow position:
               
chr10:47165881-47165575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
93-406
               

               
Cow position:
               
chr10:15462503-15462185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr10:17073353-17073668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
199, 54
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr10:20095772-20095440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr10:24022270-24022592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
169, 56
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr10:54469382-54469698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
94-266
               

               
Cow position:
               
chr10:46718738-46718905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
94-289
               

               
Cow position:
               
chr10:50044635-50044831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
94-386
               

               
Cow position:
               
chr10:34174980-34175288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
94-410
               

               
Cow position:
               
chr10:12392598-12392912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
228, 65
               

               
Conread position:
               
95-410
               

               
Cow position:
               
chr10:37528596-37528923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 11
               

               
Conread position:
               
96-249
               

               
Cow position:
               
chr10:331389-331236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
96-255
               

               
Cow position:
               
chr10:15750803-15750647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
96-269
               

               
Cow position:
               
chr10:33240671-33240839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
96-272
               

               
Cow position:
               
chr10:16683798-16683978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
96-278
               

               
Cow position:
               
chr10:47724955-47724777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
96-280
               

               
Cow position:
               
chr10:48408382-48408564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
96-284
               

               
Cow position:
               
chr10:69587670-69587856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
96-286
               

               
Cow position:
               
chr10:45965508-45965322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
96-294
               

               
Cow position:
               
chr10:747478-747278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
149, 72
               

               
Conread position:
               
96-300
               

               
Cow position:
               
chr10:19590754-19590954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr10:17836960-17836758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr10:28038925-28039131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr10:37173439-37173644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
155, 51
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr10:45679026-45678822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr10:55801311-55801101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
96-314
               

               
Cow position:
               
chr10:11576777-11576561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 44
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr10:17863594-17863360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
96-334
               

               
Cow position:
               
chr10:10124352-10124118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
96-334
               

               
Cow position:
               
chr10:43287860-43288096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
96-334
               

               
Cow position:
               
chr10:43508999-43508768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 53
               

               
Conread position:
               
96-335
               

               
Cow position:
               
chr10:60388756-60388987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
216, 60
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:20399210-20398970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 169
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:29360927-29360679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
45, 142
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:32029824-32030053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:33891075-33891316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:41984878-41985116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:48255216-48255452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:49569205-49568976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:53336396-53336632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
216, 53
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:60722149-60722373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr10:61305273-61305052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
155, 52
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr10:56733042-56732816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
150, 52
               

               
Conread position:
               
96-338
               

               
Cow position:
               
chr10:39268603-39268365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
96-338
               

               
Cow position:
               
chr10:57404925-57405166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
96-341
               

               
Cow position:
               
chr10:2853631-2853880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 52
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr10:55930206-55929946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
96-370
               

               
Cow position:
               
chr10:24744554-24744282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
96-378
               

               
Cow position:
               
chr10:5889754-5890054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
96-381
               

               
Cow position:
               
chr10:37287163-37287464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
96-384
               

               
Cow position:
               
chr10:55580265-55580554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
96-386
               

               
Cow position:
               
chr10:40738002-40737729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
96-386
               

               
Cow position:
               
chr10:41941567-41941872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
208, 53
               

               
Conread position:
               
96-395
               

               
Cow position:
               
chr10:34607570-34607257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
96-395
               

               
Cow position:
               
chr10:56080163-56080473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
96-395
               

               
Cow position:
               
chr10:64876528-64876217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
96-404
               

               
Cow position:
               
chr10:68829276-68829576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
96-407
               

               
Cow position:
               
chr10:31466755-31466431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
96-409
               

               
Cow position:
               
chr10:33915057-33915366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 58
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:11247985-11247663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
213, 51
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:22567441-22567753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:24096364-24096695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:26577558-26577234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:27716832-27717154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:29188347-29188676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:30455825-30456166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 210
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:44783353-44783025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:50109895-50110219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:52569600-52569279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr10:58718659-58718336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 138
               

               
Conread position:
               
97-299
               

               
Cow position:
               
chr10:48513074-48513275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
97-302
               

               
Cow position:
               
chr10:24276724-24276927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
97-333
               

               
Cow position:
               
chr10:43438882-43438644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
97-336
               

               
Cow position:
               
chr10:29070164-29069929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
97-336
               

               
Cow position:
               
chr10:51779025-51779258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 141
               

               
Conread position:
               
97-406
               

               
Cow position:
               
chr10:54375429-54375752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
97-410
               

               
Cow position:
               
chr10:6516174-6516500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
154, 52
               

               
Conread position:
               
98-302
               

               
Cow position:
               
chr10:49038591-49038371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
98-334
               

               
Cow position:
               
chr10:65071318-65071084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
153, 51
               

               
Conread position:
               
98-335
               

               
Cow position:
               
chr10:24312880-24313117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 49
               

               
Conread position:
               
98-336
               

               
Cow position:
               
chr10:37235546-37235782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
206, 43
               

               
Conread position:
               
98-336
               

               
Cow position:
               
chr10:66211284-66211527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
98-336
               

               
Cow position:
               
chr10:67020629-67020397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
99-337
               

               
Cow position:
               
chr10:32093811-32093573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
99-386
               

               
Cow position:
               
chr10:15294373-15294075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
99-410
               

               
Cow position:
               
chr10:46801008-46801315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
100-302
               

               
Cow position:
               
chr10:1201945-1201740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
100-302
               

               
Cow position:
               
chr10:24786113-24785912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
100-331
               

               
Cow position:
               
chr10:31855338-31855104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
100-335
               

               
Cow position:
               
chr10:52029630-52029394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr10:2462481-2462707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr10:11032486-11032727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 51
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr10:21037313-21037077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
100-385
               

               
Cow position:
               
chr10:41255989-41255697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
100-395
               

               
Cow position:
               
chr10:9288056-9287765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
100-406
               

               
Cow position:
               
chr10:14787544-14787843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
100-410
               

               
Cow position:
               
chr10:22479717-22480039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
100-410
               

               
Cow position:
               
chr10:35887399-35887720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
101-302
               

               
Cow position:
               
chr10:36285507-36285305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
101-303
               

               
Cow position:
               
chr10:37442311-37442109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
101-335
               

               
Cow position:
               
chr10:50609546-50609310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
101-336
               

               
Cow position:
               
chr10:37444214-37444445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
101-385
               

               
Cow position:
               
chr10:60032566-60032866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
101-410
               

               
Cow position:
               
chr10:32775103-32774799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
103-397
               

               
Cow position:
               
chr10:19094648-19094345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
104-379
               

               
Cow position:
               
chr10:57457336-57457047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 45
               

               
Conread position:
               
105-334
               

               
Cow position:
               
chr10:9798194-9798420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 190
               

               
Conread position:
               
105-389
               

               
Cow position:
               
chr10:19402939-19402641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
106-292
               

               
Cow position:
               
chr10:68927150-68926971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
108-328
               

               
Cow position:
               
chr10:31000591-31000822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
108-333
               

               
Cow position:
               
chr10:35802375-35802594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
110-336
               

               
Cow position:
               
chr10:34554097-34554317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
110-386
               

               
Cow position:
               
chr10:3985423-3985154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
224, 39
               

               
Conread position:
               
111-378
               

               
Cow position:
               
chr10:39140176-39139924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
111-409
               

               
Cow position:
               
chr10:52152522-52152208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
112-276
               

               
Cow position:
               
chr10:5480987-5480815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
112-284
               

               
Cow position:
               
chr10:48500089-48499926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
159, 21
               

               
Conread position:
               
112-302
               

               
Cow position:
               
chr10:50200704-50200516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 37
               

               
Conread position:
               
112-329
               

               
Cow position:
               
chr10:42115252-42115028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 204
               

               
Conread position:
               
112-334
               

               
Cow position:
               
chr10:8170242-8170031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
112-334
               

               
Cow position:
               
chr10:17983176-17982956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
136, 38
               

               
Conread position:
               
112-335
               

               
Cow position:
               
chr10:18229723-18229948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
138, 37
               

               
Conread position:
               
112-336
               

               
Cow position:
               
chr10:20505538-20505310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
112-336
               

               
Cow position:
               
chr10:31266340-31266557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
112-336
               

               
Cow position:
               
chr10:48388278-48388496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
112-336
               

               
Cow position:
               
chr10:54799609-54799389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
113-302
               

               
Cow position:
               
chr10:51313992-51313806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
138, 36
               

               
Conread position:
               
114-337
               

               
Cow position:
               
chr10:9774340-9774117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
136, 33
               

               
Conread position:
               
114-337
               

               
Cow position:
               
chr10:18153836-18154062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
114-378
               

               
Cow position:
               
chr10:14975804-14976076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
191, 24
               

               
Conread position:
               
114-410
               

               
Cow position:
               
chr10:19678864-19678552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
190, 61
               

               
Conread position:
               
115-294
               

               
Cow position:
               
chr10:62642986-62642805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
115-336
               

               
Cow position:
               
chr10:59141425-59141199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
36, 198
               

               
Conread position:
               
115-410
               

               
Cow position:
               
chr10:13050305-13050604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
118-409
               

               
Cow position:
               
chr10:46227079-46226772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
118-415
               

               
Cow position:
               
chr10:20735688-20735386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
133, 31
               

               
Conread position:
               
119-336
               

               
Cow position:
               
chr10:64878004-64878224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
120-334
               

               
Cow position:
               
chr10:6986432-6986222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
192, 29
               

               
Conread position:
               
122-336
               

               
Cow position:
               
chr10:69840318-69840098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
123-269
               

               
Cow position:
               
chr10:8321689-8321835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
123-336
               

               
Cow position:
               
chr10:40543030-40543250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
123-407
               

               
Cow position:
               
chr10:24971629-24971908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
173, 52
               

               
Conread position:
               
125-318
               

               
Cow position:
               
chr10:17699033-17699225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr10:25045711-25045911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr10:37709054-37709266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
127-410
               

               
Cow position:
               
chr10:11486999-11487291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr10:20447068-20446784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
134-315
               

               
Cow position:
               
chr10:69272721-69272546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
134-336
               

               
Cow position:
               
chr10:59675635-59675835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
135-386
               

               
Cow position:
               
chr10:24871860-24871596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
169, 14
               

               
Conread position:
               
135-405
               

               
Cow position:
               
chr10:60936916-60936642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
138-336
               

               
Cow position:
               
chr10:1719558-1719756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
139-415
               

               
Cow position:
               
chr10:888890-888609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
146-334
               

               
Cow position:
               
chr10:48259267-48259458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
146-406
               

               
Cow position:
               
chr10:22786857-22786589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
147-309
               

               
Cow position:
               
chr10:28933701-28933544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
150-410
               

               
Cow position:
               
chr10:43450957-43451230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
151-407
               

               
Cow position:
               
chr10:53907764-53908023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
152-354
               

               
Cow position:
               
chr10:65000153-65000363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
153-293
               

               
Cow position:
               
chr10:24755470-24755611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
154-410
               

               
Cow position:
               
chr10:64961259-64960988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 255
               

               
Conread position:
               
155-336
               

               
Cow position:
               
chr10:34300455-34300278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
155-336
               

               
Cow position:
               
chr10:38223649-38223830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
155-382
               

               
Cow position:
               
chr10:35026432-35026192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
155-410
               

               
Cow position:
               
chr10:7737756-7737475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
156-336
               

               
Cow position:
               
chr10:37822771-37822956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
157-410
               

               
Cow position:
               
chr10:16297385-16297630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
160-330
               

               
Cow position:
               
chr10:45476267-45476441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
160-406
               

               
Cow position:
               
chr10:48377693-48377944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
138, 217
               

               
Conread position:
               
161-355
               

               
Cow position:
               
chr10:62293946-62293751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
162-410
               

               
Cow position:
               
chr10:57033844-57034106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 48
               

               
Conread position:
               
163-288
               

               
Cow position:
               
chr10:4484612-4484486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
163-301
               

               
Cow position:
               
chr10:65067020-65067159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
163-335
               

               
Cow position:
               
chr10:65130717-65130890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
163-394
               

               
Cow position:
               
chr10:50390721-50390483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
170, 12
               

               
Conread position:
               
163-410
               

               
Cow position:
               
chr10:56835225-56834963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
163-413
               

               
Cow position:
               
chr10:16740111-16740378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
167-410
               

               
Cow position:
               
chr10:31910880-31910630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
168-336
               

               
Cow position:
               
chr10:5502966-5502795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
168-336
               

               
Cow position:
               
chr10:54936170-54936341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
168-386
               

               
Cow position:
               
chr10:41397422-41397188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 101
               

               
Conread position:
               
168-410
               

               
Cow position:
               
chr10:29211899-29211642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
169-336
               

               
Cow position:
               
chr10:8923877-8923706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
169-336
               

               
Cow position:
               
chr10:9445075-9445242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
169-336
               

               
Cow position:
               
chr10:57736223-57736393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
135, 101
               

               
Conread position:
               
170-410
               

               
Cow position:
               
chr10:69698922-69698668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 140
               

               
Conread position:
               
173-339
               

               
Cow position:
               
chr10:15874502-15874671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
178-382
               

               
Cow position:
               
chr10:32174661-32174451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
178-410
               

               
Cow position:
               
chr10:16986168-16985923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
180-336
               

               
Cow position:
               
chr10:20812106-20811946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
180-410
               

               
Cow position:
               
chr10:14639436-14639666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
182-410
               

               
Cow position:
               
chr10:40256447-40256219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
182-410
               

               
Cow position:
               
chr10:40270527-40270298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
188-336
               

               
Cow position:
               
chr10:39646183-39646333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
188-410
               

               
Cow position:
               
chr10:11217534-11217297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
188-413
               

               
Cow position:
               
chr10:6345998-6345753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
189-406
               

               
Cow position:
               
chr10:30746319-30746091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
119, 214
               

               
Conread position:
               
193-412
               

               
Cow position:
               
chr10:2708295-2708074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 173
               

               
Conread position:
               
195-354
               

               
Cow position:
               
chr10:9586605-9586769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
200-336
               

               
Cow position:
               
chr10:23500302-23500445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
206-336
               

               
Cow position:
               
chr10:35715807-35715939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
207-398
               

               
Cow position:
               
chr10:28836123-28835927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 86
               

               
Conread position:
               
208-336
               

               
Cow position:
               
chr10:26607985-26608117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
212-410
               

               
Cow position:
               
chr10:42230556-42230341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 83
               

               
Conread position:
               
256-410
               

               
Cow position:
               
chr10:6543430-6543263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               
Show alignments to all cow chromosomes.