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Cow genome map

           
Conread name:
           
Mixc-0034c10
        

               
Conread position:
               
1-243
               

               
Cow position:
               
chr22:6852445-6852698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 121
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr22:29642244-29641903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr22:40048690-40048355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:47555985-47555634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
99, 157
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr22:26339896-26339488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 181
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr22:3960168-3960591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr22:18838382-18837962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr22:38977975-38977641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr22:11613560-11613133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr22:6096880-6097188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 200
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr22:13286584-13286276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr22:3534066-3533749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:7967835-7967489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:8883146-8882816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 154
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:14178696-14179040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr22:17852502-17852885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr22:6215421-6215823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
98, 157
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr22:15490791-15490373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr22:10162104-10161671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 214
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr22:10631525-10631080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr22:11131005-11130576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr22:32698894-32698586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr22:44717855-44717506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 183
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr22:3325722-3325375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
88, 161
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr22:4060813-4061151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
93, 154
               

               
Conread position:
               
4-379
               

               
Cow position:
               
chr22:9127538-9127142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
4-406
               

               
Cow position:
               
chr22:8412661-8412233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr22:24610960-24611368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr22:877647-877228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr22:44741209-44740811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
168, 30
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr22:10533727-10533497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr22:10421168-10420833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 160
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr22:26659173-26658849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr22:5595678-5595999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 125
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr22:14690839-14691184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr22:28146808-28146476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
5-369
               

               
Cow position:
               
chr22:2627712-2627322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
5-406
               

               
Cow position:
               
chr22:8324368-8323957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
146, 22
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr22:4017606-4017180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 151
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr22:3842750-3842330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 153
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr22:17764513-17764068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
6-196
               

               
Cow position:
               
chr22:13878311-13878116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 127
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr22:26123028-26122808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr22:3264124-3264346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr22:8800323-8800556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
6-252
               

               
Cow position:
               
chr22:43237278-43237531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr22:27066510-27066253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr22:31154087-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr22:32895351-32895059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 284
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr22:28665412-28665124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr22:23176308-23176615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr22:16823224-16822928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr22:12389231-12388911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:21530227-21530547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr22:14378563-14378885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr22:37029476-37029807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 151
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr22:16533204-16532874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:2216942-2216616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:3965318-3964977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 155
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:17294805-17295139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:21012516-21012182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:25237008-25237349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:38981018-38980696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:41982590-41982923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:23580712-23581077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:33447949-33448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr22:846037-845639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr22:34750809-34750413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
6-382
               

               
Cow position:
               
chr22:6494294-6493907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 98
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr22:27328759-27329154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr22:17814365-17813953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
6-395
               

               
Cow position:
               
chr22:27431573-27431963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
6-404
               

               
Cow position:
               
chr22:3317254-3316840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr22:28071694-28071263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr22:27274568-27274970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
91, 138
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:1609640-1610051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:2502958-2502543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:3950384-3949946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 169
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:5290984-5290549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:10303148-10302716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
86, 155
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:13841272-13840847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 223
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:16044284-16044724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 177
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:16621313-16620884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
41, 161
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:18926488-18926059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 199
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:31870126-31870546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:32892828-32892405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:34726797-34726379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr22:44180726-44180298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr22:12678291-12678506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 154
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chr22:10609489-10609232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr22:31599562-31599314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 161
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr22:33399359-33399642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr22:11601165-11600875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 155
               

               
Conread position:
               
7-302
               

               
Cow position:
               
chr22:28351538-28351824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr22:1849205-1848869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr22:15024979-15025299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 155
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr22:2623391-2623723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr22:4535199-4535535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr22:30117642-30117310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr22:32188723-32189047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr22:40120750-40121086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr22:59743-59397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
7-354
               

               
Cow position:
               
chr22:30999017-30998668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
182, 108
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr22:36432841-36433193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
10, 146
               

               
Conread position:
               
7-379
               

               
Cow position:
               
chr22:7979823-7979451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr22:37201978-37201583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 8
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:1065235-1064840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
299, 95
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:6720951-6721359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:6754133-6754546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:18196642-18196213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:21890229-21890654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 149
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:22860781-22861206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
90, 162
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:38439025-38439453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:43398131-43397724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
8-227
               

               
Cow position:
               
chr22:1983978-1983753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 169
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr22:6936386-6936145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr22:24915967-24915691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 153
               

               
Conread position:
               
8-280
               

               
Cow position:
               
chr22:31510248-31510520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
8-406
               

               
Cow position:
               
chr22:9372651-9372229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
8-406
               

               
Cow position:
               
chr22:14142991-14143397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
92, 55
               

               
Conread position:
               
8-410
               

               
Cow position:
               
chr22:12573334-12572904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
89, 145
               

               
Conread position:
               
8-410
               

               
Cow position:
               
chr22:21295595-21296018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 152
               

               
Conread position:
               
9-192
               

               
Cow position:
               
chr22:8540005-8539823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr22:10553556-10553791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:12315939-12315615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 152
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr22:27047283-27047601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 166
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr22:7882681-7882342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
88, 147
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr22:4075757-4076193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 153
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr22:45513400-45513815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 145
               

               
Conread position:
               
9-414
               

               
Cow position:
               
chr22:4119433-4119867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
11-265
               

               
Cow position:
               
chr22:530449-530714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
11-321
               

               
Cow position:
               
chr22:12803258-12803578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
87, 149
               

               
Conread position:
               
11-335
               

               
Cow position:
               
chr22:23249599-23249920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr22:10338992-10339321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 147
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr22:14372297-14371959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
90, 141
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr22:25221773-25222111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
11-410
               

               
Cow position:
               
chr22:33485492-33485899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr22:27741014-27740722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr22:18218789-18219103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
232, 89
               

               
Conread position:
               
14-294
               

               
Cow position:
               
chr22:10962838-10963132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
15-334
               

               
Cow position:
               
chr22:41137442-41137109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
15-395
               

               
Cow position:
               
chr22:39507914-39508314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
15-410
               

               
Cow position:
               
chr22:18259343-18258933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
15-410
               

               
Cow position:
               
chr22:20626961-20626547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
55, 146
               

               
Conread position:
               
16-407
               

               
Cow position:
               
chr22:30484037-30483623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
16-410
               

               
Cow position:
               
chr22:10122501-10122094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 116
               

               
Conread position:
               
16-410
               

               
Cow position:
               
chr22:23857169-23856753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 146
               

               
Conread position:
               
16-410
               

               
Cow position:
               
chr22:38939819-38940243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
73, 309
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chr22:26075042-26074822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 146
               

               
Conread position:
               
17-395
               

               
Cow position:
               
chr22:23009824-23010214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
18-179
               

               
Cow position:
               
chr22:23675848-23676017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
83, 138
               

               
Conread position:
               
18-229
               

               
Cow position:
               
chr22:9597460-9597681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
18-233
               

               
Cow position:
               
chr22:4135719-4135513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
18-279
               

               
Cow position:
               
chr22:22553141-22553386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
233, 11
               

               
Conread position:
               
18-289
               

               
Cow position:
               
chr22:2912468-2912743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr22:20862633-20862923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 184
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr22:40789685-40789405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
18-302
               

               
Cow position:
               
chr22:15567897-15568188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
18-334
               

               
Cow position:
               
chr22:10324001-10323700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 98
               

               
Conread position:
               
18-334
               

               
Cow position:
               
chr22:19787576-19787886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
184, 11
               

               
Conread position:
               
18-334
               

               
Cow position:
               
chr22:24066113-24066440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
73, 225
               

               
Conread position:
               
18-335
               

               
Cow position:
               
chr22:4563483-4563155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
18-335
               

               
Cow position:
               
chr22:22613224-22612905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:534619-534285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:1591143-1590812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:8481762-8481439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:12967950-12968278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:24175776-24176082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 136
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:30049446-30049781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:40349462-40349142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 12
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:42685011-42684692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
188, 64
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr22:43812319-43812626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
18-340
               

               
Cow position:
               
chr22:17126572-17126242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
18-383
               

               
Cow position:
               
chr22:27171144-27171527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
18-397
               

               
Cow position:
               
chr22:15950266-15950659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 153
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr22:891038-891434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
274, 73
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr22:1326538-1326125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr22:7913583-7913184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr22:8840725-8840292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
18-410
               

               
Cow position:
               
chr22:15039063-15039480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
19-340
               

               
Cow position:
               
chr22:28357145-28356823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
19-340
               

               
Cow position:
               
chr22:29954886-29955211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
19-385
               

               
Cow position:
               
chr22:4583678-4583300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
19-406
               

               
Cow position:
               
chr22:14924613-14925013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 142
               

               
Conread position:
               
19-406
               

               
Cow position:
               
chr22:25943594-25943190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
19-407
               

               
Cow position:
               
chr22:21502863-21502444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr22:1279266-1279681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr22:10532619-10532201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
131, 94
               

               
Conread position:
               
19-410
               

               
Cow position:
               
chr22:32661628-32661221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
20-268
               

               
Cow position:
               
chr22:15668358-15668614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr22:7301721-7302013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
20-336
               

               
Cow position:
               
chr22:37324659-37324338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
20-395
               

               
Cow position:
               
chr22:10567596-10567967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
20-395
               

               
Cow position:
               
chr22:14245329-14245699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 178
               

               
Conread position:
               
20-396
               

               
Cow position:
               
chr22:8733221-8733603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
20-402
               

               
Cow position:
               
chr22:8447032-8446645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
272, 82
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr22:16251455-16251860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
20-410
               

               
Cow position:
               
chr22:22155721-22155306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
20-411
               

               
Cow position:
               
chr22:46567777-46568185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 5
               

               
Conread position:
               
20-413
               

               
Cow position:
               
chr22:27322428-27322021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr22:25540116-25539850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
21-327
               

               
Cow position:
               
chr22:2524080-2523763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
21-336
               

               
Cow position:
               
chr22:25742832-25743160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 138
               

               
Conread position:
               
21-410
               

               
Cow position:
               
chr22:30699295-30698886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
21-410
               

               
Cow position:
               
chr22:40374726-40374311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 139
               

               
Conread position:
               
22-175
               

               
Cow position:
               
chr22:3945483-3945333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
22-302
               

               
Cow position:
               
chr22:16291808-16292091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 113
               

               
Conread position:
               
22-390
               

               
Cow position:
               
chr22:10684975-10685357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
22-407
               

               
Cow position:
               
chr22:31646607-31646202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
22-417
               

               
Cow position:
               
chr22:644655-645062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 5
               

               
Conread position:
               
23-254
               

               
Cow position:
               
chr22:12341311-12341068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
23-269
               

               
Cow position:
               
chr22:8090417-8090669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
24-285
               

               
Cow position:
               
chr22:45846256-45845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
24-336
               

               
Cow position:
               
chr22:14844676-14844362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
24-336
               

               
Cow position:
               
chr22:15090856-15090532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
26-334
               

               
Cow position:
               
chr22:26141387-26141066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
27-333
               

               
Cow position:
               
chr22:24732449-24732752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
27-336
               

               
Cow position:
               
chr22:7852074-7851751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
27-372
               

               
Cow position:
               
chr22:27581551-27581192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
27-395
               

               
Cow position:
               
chr22:13769588-13769200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 214
               

               
Conread position:
               
27-409
               

               
Cow position:
               
chr22:25247024-25246616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
8, 295
               

               
Conread position:
               
27-410
               

               
Cow position:
               
chr22:590450-590053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
27-410
               

               
Cow position:
               
chr22:27819112-27818705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
27-410
               

               
Cow position:
               
chr22:34895074-34894679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
28-287
               

               
Cow position:
               
chr22:15618714-15618455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
223, 86
               

               
Conread position:
               
28-331
               

               
Cow position:
               
chr22:3269374-3269682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
7, 91
               

               
Conread position:
               
28-335
               

               
Cow position:
               
chr22:21355031-21355352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
28-336
               

               
Cow position:
               
chr22:6149281-6149594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr22:13222226-13222007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
29-239
               

               
Cow position:
               
chr22:23735906-23736122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
29-257
               

               
Cow position:
               
chr22:12929172-12929404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr22:1563144-1563405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 89
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr22:15020304-15020557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
29-291
               

               
Cow position:
               
chr22:10315186-10314912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 127
               

               
Conread position:
               
29-291
               

               
Cow position:
               
chr22:13057599-13057861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 26
               

               
Conread position:
               
29-292
               

               
Cow position:
               
chr22:24628549-24628814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
29-335
               

               
Cow position:
               
chr22:5616410-5616092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
138, 11
               

               
Conread position:
               
29-335
               

               
Cow position:
               
chr22:28057941-28058251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr22:2148677-2148365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 164
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr22:5016605-5016300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
150, 73
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr22:34712834-34712506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
29-347
               

               
Cow position:
               
chr22:30269517-30269194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
29-353
               

               
Cow position:
               
chr22:12313533-12313195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
29-370
               

               
Cow position:
               
chr22:10295144-10294795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
29-382
               

               
Cow position:
               
chr22:34616415-34616042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 223
               

               
Conread position:
               
29-397
               

               
Cow position:
               
chr22:26184052-26184442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
29-403
               

               
Cow position:
               
chr22:1309625-1310015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
29-405
               

               
Cow position:
               
chr22:4357198-4356808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
29-407
               

               
Cow position:
               
chr22:25477155-25476772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
313, 85
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr22:5282606-5282213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr22:5337489-5337893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr22:26316565-26316184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 18
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr22:40387263-40386869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
30-300
               

               
Cow position:
               
chr22:24734207-24734478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
30-325
               

               
Cow position:
               
chr22:22908294-22907996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 127
               

               
Conread position:
               
31-293
               

               
Cow position:
               
chr22:45807940-45807675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
31-331
               

               
Cow position:
               
chr22:11458922-11458621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr22:25629678-25629979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
219, 51
               

               
Conread position:
               
31-410
               

               
Cow position:
               
chr22:17152785-17152384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
20, 182
               

               
Conread position:
               
33-337
               

               
Cow position:
               
chr22:864410-864727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 127
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr22:25361588-25361282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 122
               

               
Conread position:
               
34-407
               

               
Cow position:
               
chr22:1289425-1289799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
269, 68
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr22:9977913-9977522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr22:13300515-13300125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 137
               

               
Conread position:
               
37-197
               

               
Cow position:
               
chr22:13734919-13735084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
37-250
               

               
Cow position:
               
chr22:37030416-37030641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 213
               

               
Conread position:
               
37-269
               

               
Cow position:
               
chr22:11766949-11767191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
37-336
               

               
Cow position:
               
chr22:10633015-10632707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 137
               

               
Conread position:
               
37-336
               

               
Cow position:
               
chr22:12946081-12946373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 117
               

               
Conread position:
               
37-337
               

               
Cow position:
               
chr22:17125683-17125373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
40-302
               

               
Cow position:
               
chr22:9283500-9283772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 227
               

               
Conread position:
               
40-336
               

               
Cow position:
               
chr22:14365860-14366162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
41-406
               

               
Cow position:
               
chr22:32651592-32651214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
42-337
               

               
Cow position:
               
chr22:27480991-27480682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
42-386
               

               
Cow position:
               
chr22:19047720-19048074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
43-302
               

               
Cow position:
               
chr22:16650104-16650373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
104, 71
               

               
Conread position:
               
43-336
               

               
Cow position:
               
chr22:38313382-38313672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
43-410
               

               
Cow position:
               
chr22:15959682-15960066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
46-407
               

               
Cow position:
               
chr22:13688015-13688404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 107
               

               
Conread position:
               
47-410
               

               
Cow position:
               
chr22:30955108-30954744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
48-285
               

               
Cow position:
               
chr22:10293041-10292805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
51-336
               

               
Cow position:
               
chr22:1975696-1975404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
54-289
               

               
Cow position:
               
chr22:27835617-27835369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
54-335
               

               
Cow position:
               
chr22:43044085-43044374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
54-410
               

               
Cow position:
               
chr22:43291818-43292197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
56-335
               

               
Cow position:
               
chr22:24324513-24324252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
185, 57
               

               
Conread position:
               
56-396
               

               
Cow position:
               
chr22:11257666-11258019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
59-331
               

               
Cow position:
               
chr22:2010869-2010596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr22:13849374-13849658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
61-336
               

               
Cow position:
               
chr22:31592779-31593069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
40, 223
               

               
Conread position:
               
62-291
               

               
Cow position:
               
chr22:3241627-3241859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
66-280
               

               
Cow position:
               
chr22:26506664-26506876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
70-410
               

               
Cow position:
               
chr22:5467304-5467663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
75-336
               

               
Cow position:
               
chr22:10585652-10585909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
76-386
               

               
Cow position:
               
chr22:4651239-4650910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
77-336
               

               
Cow position:
               
chr22:33917855-33918107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
79-379
               

               
Cow position:
               
chr22:23833335-23833032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
172, 5
               

               
Conread position:
               
82-332
               

               
Cow position:
               
chr22:37139474-37139242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
230, 14
               

               
Conread position:
               
82-410
               

               
Cow position:
               
chr22:15338157-15337822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
163, 14
               

               
Conread position:
               
83-410
               

               
Cow position:
               
chr22:10919811-10920156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
166, 13
               

               
Conread position:
               
86-415
               

               
Cow position:
               
chr22:16812126-16812462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
252, 10
               

               
Conread position:
               
89-249
               

               
Cow position:
               
chr22:21264330-21264171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
90-332
               

               
Cow position:
               
chr22:27550391-27550151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
160, 6
               

               
Conread position:
               
91-302
               

               
Cow position:
               
chr22:31213612-31213403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
159, 5
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr22:28179892-28179635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 199
               

               
Conread position:
               
93-249
               

               
Cow position:
               
chr22:5837302-5837147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
93-291
               

               
Cow position:
               
chr22:27292123-27291932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
93-293
               

               
Cow position:
               
chr22:26969815-26969617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
152, 56
               

               
Conread position:
               
93-302
               

               
Cow position:
               
chr22:19738538-19738748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
93-324
               

               
Cow position:
               
chr22:10677959-10678181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
191, 15
               

               
Conread position:
               
93-333
               

               
Cow position:
               
chr22:26097587-26097819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr22:23403614-23403849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr22:30094279-30094037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr22:35753277-35753514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
93-338
               

               
Cow position:
               
chr22:3367218-3366987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
93-366
               

               
Cow position:
               
chr22:39696320-39696045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
201, 54
               

               
Conread position:
               
93-397
               

               
Cow position:
               
chr22:14638448-14638748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
93-406
               

               
Cow position:
               
chr22:26151080-26151410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
179, 54
               

               
Conread position:
               
93-407
               

               
Cow position:
               
chr22:41270969-41271282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 54
               

               
Conread position:
               
93-407
               

               
Cow position:
               
chr22:41971122-41971445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 132
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr22:226422-226731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr22:912130-911807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr22:3993642-3993315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
201, 54
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr22:4043965-4043641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr22:18021000-18021313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
211, 54
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr22:30515289-30514960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 272
               

               
Conread position:
               
94-287
               

               
Cow position:
               
chr22:9466646-9466450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
94-301
               

               
Cow position:
               
chr22:33386473-33386677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
94-302
               

               
Cow position:
               
chr22:26376303-26376098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
94-336
               

               
Cow position:
               
chr22:22146265-22146018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
94-336
               

               
Cow position:
               
chr22:36569519-36569750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr22:1602218-1601953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
94-409
               

               
Cow position:
               
chr22:41044877-41045208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
94-410
               

               
Cow position:
               
chr22:26490491-26490164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
94-410
               

               
Cow position:
               
chr22:33414990-33415305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
96-220
               

               
Cow position:
               
chr22:18293736-18293853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
96-264
               

               
Cow position:
               
chr22:44410750-44410590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
96-265
               

               
Cow position:
               
chr22:17193421-17193250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
144, 73
               

               
Conread position:
               
96-265
               

               
Cow position:
               
chr22:27681746-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
96-269
               

               
Cow position:
               
chr22:21325704-21325875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
152, 67
               

               
Conread position:
               
96-283
               

               
Cow position:
               
chr22:16053336-16053153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
149, 57
               

               
Conread position:
               
96-294
               

               
Cow position:
               
chr22:9668605-9668399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
96-301
               

               
Cow position:
               
chr22:6574772-6574565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr22:11778581-11778785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr22:26041628-26041425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr22:294904-295140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 90
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr22:23689175-23689410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
96-333
               

               
Cow position:
               
chr22:19652954-19653190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
96-333
               

               
Cow position:
               
chr22:42612488-42612252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
207, 67
               

               
Conread position:
               
96-335
               

               
Cow position:
               
chr22:15068456-15068218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
96-335
               

               
Cow position:
               
chr22:39293714-39293954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:1640271-1640517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
133, 53
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:4108701-4108947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:5384684-5384447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:7153910-7153682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:7164991-7164746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
100, 52
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:10983379-10983136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
198, 122
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:22223216-22222984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
216, 46
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:22997506-22997271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:23181013-23181244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
216, 53
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:23804947-23805190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:27825869-27825628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:29013910-29013669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
149, 62
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr22:46610751-46610989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
96-341
               

               
Cow position:
               
chr22:15031823-15032057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
96-355
               

               
Cow position:
               
chr22:12800700-12800435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
96-371
               

               
Cow position:
               
chr22:23855002-23854725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
175, 21
               

               
Conread position:
               
96-372
               

               
Cow position:
               
chr22:3908959-3908672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
96-381
               

               
Cow position:
               
chr22:42946019-42946319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
96-395
               

               
Cow position:
               
chr22:15398548-15398858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
96-395
               

               
Cow position:
               
chr22:32326828-32326521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 52
               

               
Conread position:
               
96-406
               

               
Cow position:
               
chr22:4990138-4990462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
196, 73
               

               
Conread position:
               
96-406
               

               
Cow position:
               
chr22:38930478-38930805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
96-409
               

               
Cow position:
               
chr22:6610321-6610645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
96-409
               

               
Cow position:
               
chr22:25205942-25206263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
96-409
               

               
Cow position:
               
chr22:30190977-30190667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:1265895-1266234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:1484892-1484567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:3987545-3987217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
154, 53
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:6092625-6092937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:6622218-6622540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
153, 58
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:7838620-7838310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
188, 59
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:11745874-11746199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:12681771-12682087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:12726907-12727219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
239, 67
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:14376383-14376686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 58
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:16273669-16273339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:19341230-19340905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:21746674-21746344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
156, 53
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:26134195-26134527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:30710434-30710110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 287
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:32480451-32480760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
218, 51
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:33901055-33901370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
237, 62
               

               
Conread position:
               
96-410
               

               
Cow position:
               
chr22:34398427-34398750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 53
               

               
Conread position:
               
96-411
               

               
Cow position:
               
chr22:5622687-5622991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
96-411
               

               
Cow position:
               
chr22:21568026-21567707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
96-411
               

               
Cow position:
               
chr22:34475971-34476296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 53
               

               
Conread position:
               
97-285
               

               
Cow position:
               
chr22:1874720-1874536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr22:36545897-36546140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
154, 52
               

               
Conread position:
               
97-350
               

               
Cow position:
               
chr22:41853933-41853675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
97-382
               

               
Cow position:
               
chr22:9521171-9520883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
98-336
               

               
Cow position:
               
chr22:4988533-4988767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
198, 80
               

               
Conread position:
               
98-336
               

               
Cow position:
               
chr22:23806514-23806754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
98-379
               

               
Cow position:
               
chr22:19775405-19775689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
98-385
               

               
Cow position:
               
chr22:6122877-6123165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
199, 51
               

               
Conread position:
               
98-410
               

               
Cow position:
               
chr22:8418488-8418173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
152, 51
               

               
Conread position:
               
99-341
               

               
Cow position:
               
chr22:16057728-16057488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
152, 54
               

               
Conread position:
               
99-341
               

               
Cow position:
               
chr22:41829214-41829442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
194, 50
               

               
Conread position:
               
99-410
               

               
Cow position:
               
chr22:23758986-23759307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
216, 50
               

               
Conread position:
               
100-306
               

               
Cow position:
               
chr22:10981413-10981209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr22:14119006-14118790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr22:7518449-7518208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
100-366
               

               
Cow position:
               
chr22:39519742-39519473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
100-410
               

               
Cow position:
               
chr22:17993004-17993325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
100-410
               

               
Cow position:
               
chr22:32221668-32221367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
101-336
               

               
Cow position:
               
chr22:38547843-38547602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
101-385
               

               
Cow position:
               
chr22:36539639-36539936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
101-410
               

               
Cow position:
               
chr22:23865494-23865167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
102-336
               

               
Cow position:
               
chr22:39302976-39303214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
102-396
               

               
Cow position:
               
chr22:13670147-13670451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
103-301
               

               
Cow position:
               
chr22:35520233-35520430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
105-336
               

               
Cow position:
               
chr22:34606603-34606381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
106-335
               

               
Cow position:
               
chr22:12777572-12777790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
189, 51
               

               
Conread position:
               
106-409
               

               
Cow position:
               
chr22:33094583-33094267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 44
               

               
Conread position:
               
107-303
               

               
Cow position:
               
chr22:1727892-1727707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
107-335
               

               
Cow position:
               
chr22:5042332-5042113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
144, 42
               

               
Conread position:
               
108-354
               

               
Cow position:
               
chr22:4974406-4974648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
143, 41
               

               
Conread position:
               
108-407
               

               
Cow position:
               
chr22:13951197-13950880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
110-336
               

               
Cow position:
               
chr22:37554604-37554834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
110-379
               

               
Cow position:
               
chr22:41245263-41244982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
225, 0
               

               
Conread position:
               
111-410
               

               
Cow position:
               
chr22:30712774-30712454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
111-415
               

               
Cow position:
               
chr22:11500793-11500482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
140, 38
               

               
Conread position:
               
112-314
               

               
Cow position:
               
chr22:12599100-12598898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
112-377
               

               
Cow position:
               
chr22:28731690-28731424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
112-385
               

               
Cow position:
               
chr22:35533338-35533625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
112-395
               

               
Cow position:
               
chr22:10363081-10362788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
133, 37
               

               
Conread position:
               
112-410
               

               
Cow position:
               
chr22:2702244-2701933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
138, 37
               

               
Conread position:
               
112-410
               

               
Cow position:
               
chr22:4632018-4631711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
53, 231
               

               
Conread position:
               
113-334
               

               
Cow position:
               
chr22:45271595-45271375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
183, 54
               

               
Conread position:
               
114-294
               

               
Cow position:
               
chr22:11497212-11497027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
114-336
               

               
Cow position:
               
chr22:6360475-6360696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
114-337
               

               
Cow position:
               
chr22:4993906-4994130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
190, 49
               

               
Conread position:
               
114-410
               

               
Cow position:
               
chr22:6202926-6202618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
115-333
               

               
Cow position:
               
chr22:25342026-25341815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
118-333
               

               
Cow position:
               
chr22:10403493-10403701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
120-336
               

               
Cow position:
               
chr22:20687307-20687085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
122-333
               

               
Cow position:
               
chr22:29256307-29256520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
126-404
               

               
Cow position:
               
chr22:8063322-8063613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
109, 261
               

               
Conread position:
               
127-397
               

               
Cow position:
               
chr22:14602393-14602678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
129-336
               

               
Cow position:
               
chr22:1821875-1822083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
129-336
               

               
Cow position:
               
chr22:45685024-45685241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
129-405
               

               
Cow position:
               
chr22:26107055-26106768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
209, 27
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr22:9734845-9734564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
203, 16
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr22:39472384-39472671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
179, 14
               

               
Conread position:
               
135-336
               

               
Cow position:
               
chr22:35902706-35902903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
136-410
               

               
Cow position:
               
chr22:1342727-1342447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
141-336
               

               
Cow position:
               
chr22:27512175-27512371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 141
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr22:30689619-30689336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
146-302
               

               
Cow position:
               
chr22:26123348-26123501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
147-336
               

               
Cow position:
               
chr22:47582884-47582698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
150-336
               

               
Cow position:
               
chr22:2141789-2141606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
151-385
               

               
Cow position:
               
chr22:30107141-30106902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
154-302
               

               
Cow position:
               
chr22:1000082-999945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
154-302
               

               
Cow position:
               
chr22:7252666-7252818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
154-410
               

               
Cow position:
               
chr22:37817732-37817470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
155-410
               

               
Cow position:
               
chr22:4338085-4337814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 256
               

               
Conread position:
               
159-332
               

               
Cow position:
               
chr22:3945145-3944970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
159-386
               

               
Cow position:
               
chr22:19848425-19848666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
159-407
               

               
Cow position:
               
chr22:30473017-30472754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
160-335
               

               
Cow position:
               
chr22:4026574-4026400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
160-410
               

               
Cow position:
               
chr22:25912893-25912636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
163-293
               

               
Cow position:
               
chr22:14601469-14601340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
163-336
               

               
Cow position:
               
chr22:10683697-10683873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
163-336
               

               
Cow position:
               
chr22:25764520-25764684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
164-372
               

               
Cow position:
               
chr22:1991440-1991232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
165-339
               

               
Cow position:
               
chr22:2945708-2945883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
165-410
               

               
Cow position:
               
chr22:34666010-34665757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
169-339
               

               
Cow position:
               
chr22:1081462-1081292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
171-306
               

               
Cow position:
               
chr22:3541765-3541898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 103
               

               
Conread position:
               
172-334
               

               
Cow position:
               
chr22:34986157-34986308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
173-302
               

               
Cow position:
               
chr22:33949044-33949173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-334
               

               
Cow position:
               
chr22:19376663-19376504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 137
               

               
Conread position:
               
174-410
               

               
Cow position:
               
chr22:13242395-13242141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 139
               

               
Conread position:
               
176-413
               

               
Cow position:
               
chr22:16235697-16235949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
177-336
               

               
Cow position:
               
chr22:39517134-39516975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
178-302
               

               
Cow position:
               
chr22:1715122-1715244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
178-331
               

               
Cow position:
               
chr22:21526643-21526795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
178-378
               

               
Cow position:
               
chr22:44386456-44386661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
156, 95
               

               
Conread position:
               
180-410
               

               
Cow position:
               
chr22:11200984-11200751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
132, 115
               

               
Conread position:
               
180-410
               

               
Cow position:
               
chr22:11987266-11987509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 233
               

               
Conread position:
               
181-336
               

               
Cow position:
               
chr22:8302905-8303059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
181-336
               

               
Cow position:
               
chr22:36761575-36761422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
181-406
               

               
Cow position:
               
chr22:6204347-6204584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
194-387
               

               
Cow position:
               
chr22:34930810-34931020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
194-410
               

               
Cow position:
               
chr22:13016854-13017076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
200-417
               

               
Cow position:
               
chr22:11489461-11489242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
96, 123
               

               
Conread position:
               
206-410
               

               
Cow position:
               
chr22:28937976-28938203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr22:45106002-45106214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 96
               
Show alignments to all cow chromosomes.