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Cow genome map

           
Conread name:
           
Mixc-0036l12
        

               
Conread position:
               
253-462
               

               
Cow position:
               
chr19:25832011-25832218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 73
               

               
Conread position:
               
254-559
               

               
Cow position:
               
chr19:23378865-23378557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
255-615
               

               
Cow position:
               
chr19:23394972-23394627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
255-741
               

               
Cow position:
               
chr19:39751659-39751172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
257-599
               

               
Cow position:
               
chr19:15719438-15719787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
170, 22
               

               
Conread position:
               
257-659
               

               
Cow position:
               
chr19:35762069-35762483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
257-684
               

               
Cow position:
               
chr19:41946367-41945935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
257-732
               

               
Cow position:
               
chr19:39057431-39056941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
257-734
               

               
Cow position:
               
chr19:5185072-5185559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
259-477
               

               
Cow position:
               
chr19:38732321-38732104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
168, 29
               

               
Conread position:
               
259-487
               

               
Cow position:
               
chr19:23756568-23756787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
259-496
               

               
Cow position:
               
chr19:10238919-10238684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
167, 29
               

               
Conread position:
               
259-531
               

               
Cow position:
               
chr19:18054076-18054347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
259-580
               

               
Cow position:
               
chr19:18129743-18129409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
259-667
               

               
Cow position:
               
chr19:7668878-7668470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
259-712
               

               
Cow position:
               
chr19:47671917-47671465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
182, 29
               

               
Conread position:
               
259-741
               

               
Cow position:
               
chr19:39576391-39576882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
262-488
               

               
Cow position:
               
chr19:23889306-23889533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
262-577
               

               
Cow position:
               
chr19:30927978-30927672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
262-582
               

               
Cow position:
               
chr19:15853106-15852795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
208, 27
               

               
Conread position:
               
262-737
               

               
Cow position:
               
chr19:16096373-16096861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
265-602
               

               
Cow position:
               
chr19:47453608-47453262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
265-642
               

               
Cow position:
               
chr19:23784249-23784611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
257, 23
               

               
Conread position:
               
265-644
               

               
Cow position:
               
chr19:16621181-16621567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
265-740
               

               
Cow position:
               
chr19:55358217-55357745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
266-707
               

               
Cow position:
               
chr19:21378290-21378740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
267-592
               

               
Cow position:
               
chr19:41497467-41497793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
267-670
               

               
Cow position:
               
chr19:55688519-55688941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
286-742
               

               
Cow position:
               
chr19:24062433-24061983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
297-600
               

               
Cow position:
               
chr19:34288161-34287854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
297-693
               

               
Cow position:
               
chr19:3811874-3812280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
169, 28
               

               
Conread position:
               
297-693
               

               
Cow position:
               
chr19:10545558-10545973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
132, 55
               

               
Conread position:
               
297-740
               

               
Cow position:
               
chr19:25726734-25727190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
301-734
               

               
Cow position:
               
chr19:23832444-23832869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
315-742
               

               
Cow position:
               
chr19:22765750-22765303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
322-734
               

               
Cow position:
               
chr19:15067884-15068299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
326-654
               

               
Cow position:
               
chr19:20984655-20984992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
98, 230
               

               
Conread position:
               
326-734
               

               
Cow position:
               
chr19:18786204-18786631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
329-655
               

               
Cow position:
               
chr19:52480100-52479781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
329-742
               

               
Cow position:
               
chr19:4587623-4588034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 152
               

               
Conread position:
               
329-742
               

               
Cow position:
               
chr19:35018130-35018559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 92
               

               
Conread position:
               
330-650
               

               
Cow position:
               
chr19:52735221-52734899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
140, 22
               

               
Conread position:
               
330-742
               

               
Cow position:
               
chr19:8033863-8033425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
334-734
               

               
Cow position:
               
chr19:9541791-9542203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
335-707
               

               
Cow position:
               
chr19:36060047-36059653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
336-696
               

               
Cow position:
               
chr19:52381630-52381264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
336-743
               

               
Cow position:
               
chr19:24669270-24669683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
338-742
               

               
Cow position:
               
chr19:21199245-21198813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
339-742
               

               
Cow position:
               
chr19:14593162-14592740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 402
               

               
Conread position:
               
344-742
               

               
Cow position:
               
chr19:20670804-20671215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
345-622
               

               
Cow position:
               
chr19:10242678-10242395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
345-742
               

               
Cow position:
               
chr19:34619928-34620348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
350-742
               

               
Cow position:
               
chr19:30534023-30533628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
352-652
               

               
Cow position:
               
chr19:34001299-34000990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 184
               

               
Conread position:
               
352-734
               

               
Cow position:
               
chr19:8375210-8375607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
77, 261
               

               
Conread position:
               
352-741
               

               
Cow position:
               
chr19:5656032-5656423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 185
               

               
Conread position:
               
352-742
               

               
Cow position:
               
chr19:24358151-24358537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
352-742
               

               
Cow position:
               
chr19:52456668-52457065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
355-693
               

               
Cow position:
               
chr19:41585058-41584709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 265
               

               
Conread position:
               
355-700
               

               
Cow position:
               
chr19:48723112-48722754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
356-680
               

               
Cow position:
               
chr19:55967614-55967940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
72, 270
               

               
Conread position:
               
357-741
               

               
Cow position:
               
chr19:43441255-43440850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
111, 241
               

               
Conread position:
               
369-742
               

               
Cow position:
               
chr19:34955623-34956011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
390-701
               

               
Cow position:
               
chr19:19919407-19919730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 211
               

               
Conread position:
               
390-734
               

               
Cow position:
               
chr19:35742216-35741851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 186
               

               
Conread position:
               
390-734
               

               
Cow position:
               
chr19:53657946-53657595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 222
               

               
Conread position:
               
390-742
               

               
Cow position:
               
chr19:33747904-33747539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
449-742
               

               
Cow position:
               
chr19:37502685-37502970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
486-742
               

               
Cow position:
               
chr19:33945819-33945557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
496-742
               

               
Cow position:
               
chr19:28921757-28921517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
496-742
               

               
Cow position:
               
chr19:36176680-36176426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
497-655
               

               
Cow position:
               
chr19:35846830-35846672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
497-725
               

               
Cow position:
               
chr19:6610062-6610298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
497-740
               

               
Cow position:
               
chr19:11171286-11171530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
497-742
               

               
Cow position:
               
chr19:1580648-1580894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
497-742
               

               
Cow position:
               
chr19:54294656-54294897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
498-693
               

               
Cow position:
               
chr19:10093225-10093030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
498-742
               

               
Cow position:
               
chr19:52773248-52773490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
499-653
               

               
Cow position:
               
chr19:7158791-7158954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
499-656
               

               
Cow position:
               
chr19:52136762-52136920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
499-693
               

               
Cow position:
               
chr19:35622289-35622101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
499-727
               

               
Cow position:
               
chr19:25637566-25637798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
499-733
               

               
Cow position:
               
chr19:43358020-43358255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
499-734
               

               
Cow position:
               
chr19:23786123-23785882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
499-737
               

               
Cow position:
               
chr19:7612551-7612320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
499-740
               

               
Cow position:
               
chr19:27997593-27997840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-741
               

               
Cow position:
               
chr19:12607969-12608210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:485256-485505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:2821512-2821265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:3106065-3106314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:3511359-3511108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:5679384-5679633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:5887134-5887383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:6929877-6929628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:7475653-7475902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:10194088-10194337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:10966640-10966889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:11487673-11487919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:18076625-18076874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:18824151-18824397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:20001393-20001642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:20612469-20612220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:21336318-21336567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 176
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:22076732-22076483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:26978962-26979211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:29394569-29394320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:30237969-30237721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:30518988-30518739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 176
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:30540127-30540375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:33877753-33877504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:34971288-34971039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:39951999-39952248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:40805333-40805582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:41223396-41223645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:42726291-42726040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:43149847-43149598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:43175216-43175465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 175
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:43702781-43703016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:50177763-50177516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 164
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:52147177-52147424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 140
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:52775136-52774887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:54541727-54541975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr19:55624932-55625180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
502-659
               

               
Cow position:
               
chr19:25835429-25835583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 99
               

               
Conread position:
               
502-734
               

               
Cow position:
               
chr19:12653138-12652901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
502-737
               

               
Cow position:
               
chr19:38392729-38392488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr19:634653-634410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr19:4460483-4460725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr19:7760582-7760826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr19:11935398-11935154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr19:18476887-18476643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr19:26838954-26838710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr19:32164279-32164523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr19:34905063-34905307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
502-742
               

               
Cow position:
               
chr19:19500430-19500675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
502-742
               

               
Cow position:
               
chr19:21706007-21705761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
502-742
               

               
Cow position:
               
chr19:23665679-23665433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
502-742
               

               
Cow position:
               
chr19:29754979-29755221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
502-742
               

               
Cow position:
               
chr19:37646910-37647155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
502-742
               

               
Cow position:
               
chr19:55238570-55238814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 53
               

               
Conread position:
               
503-645
               

               
Cow position:
               
chr19:24137188-24137045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
503-663
               

               
Cow position:
               
chr19:10171929-10171770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
503-663
               

               
Cow position:
               
chr19:23244594-23244751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 92
               

               
Conread position:
               
503-664
               

               
Cow position:
               
chr19:25851558-25851720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
503-681
               

               
Cow position:
               
chr19:25864994-25865176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
503-691
               

               
Cow position:
               
chr19:21335680-21335875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 177
               

               
Conread position:
               
503-693
               

               
Cow position:
               
chr19:14347939-14347745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
503-693
               

               
Cow position:
               
chr19:25851902-25852096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
503-696
               

               
Cow position:
               
chr19:23222562-23222368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
503-704
               

               
Cow position:
               
chr19:31874039-31873841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
503-707
               

               
Cow position:
               
chr19:14992996-14993199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
503-717
               

               
Cow position:
               
chr19:53037226-53037442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr19:10786442-10786665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr19:31595226-31594993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr19:32457570-32457336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr19:34425511-34425276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr19:38596546-38596309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
503-736
               

               
Cow position:
               
chr19:46180888-46181120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
122, 92
               

               
Conread position:
               
503-740
               

               
Cow position:
               
chr19:33932222-33932455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
163, 74
               

               
Conread position:
               
503-740
               

               
Cow position:
               
chr19:46918776-46918529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
503-741
               

               
Cow position:
               
chr19:35540223-35539992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
503-741
               

               
Cow position:
               
chr19:55422296-55422053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:1901071-1901315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:6516193-6515947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:14928729-14928986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:29477224-29476983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:31378674-31378929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:39245827-39245586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:47727650-47727882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 29
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:48409437-48409202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
123, 92
               

               
Conread position:
               
503-742
               

               
Cow position:
               
chr19:55724774-55725013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
503-743
               

               
Cow position:
               
chr19:38340053-38340286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
504-641
               

               
Cow position:
               
chr19:25769590-25769452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
504-722
               

               
Cow position:
               
chr19:47118570-47118790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 202
               

               
Conread position:
               
505-676
               

               
Cow position:
               
chr19:20935678-20935510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
505-734
               

               
Cow position:
               
chr19:6417519-6417294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
161, 98
               

               
Conread position:
               
505-741
               

               
Cow position:
               
chr19:17273805-17274029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
505-742
               

               
Cow position:
               
chr19:39104083-39104320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
508-696
               

               
Cow position:
               
chr19:39794881-39794689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
508-742
               

               
Cow position:
               
chr19:36352526-36352287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
508-742
               

               
Cow position:
               
chr19:40848234-40848472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 82
               

               
Conread position:
               
509-741
               

               
Cow position:
               
chr19:20686462-20686224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
509-742
               

               
Cow position:
               
chr19:7407824-7407585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
509-742
               

               
Cow position:
               
chr19:8205762-8206001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
509-742
               

               
Cow position:
               
chr19:11089180-11089419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
509-742
               

               
Cow position:
               
chr19:15233691-15233452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
509-742
               

               
Cow position:
               
chr19:19804610-19804846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
509-742
               

               
Cow position:
               
chr19:25093468-25093707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
510-742
               

               
Cow position:
               
chr19:1581966-1582201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
510-742
               

               
Cow position:
               
chr19:25696284-25696519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
115, 167
               

               
Conread position:
               
511-678
               

               
Cow position:
               
chr19:34911806-34911638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
115, 148
               

               
Conread position:
               
513-640
               

               
Cow position:
               
chr19:2735049-2735176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
513-741
               

               
Cow position:
               
chr19:15863125-15863356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
113, 64
               

               
Conread position:
               
516-742
               

               
Cow position:
               
chr19:29416781-29416551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
520-732
               

               
Cow position:
               
chr19:27104657-27104446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
523-742
               

               
Cow position:
               
chr19:46694057-46693836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
524-737
               

               
Cow position:
               
chr19:12019357-12019148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
524-742
               

               
Cow position:
               
chr19:14158854-14158630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
527-742
               

               
Cow position:
               
chr19:27096039-27095817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
532-742
               

               
Cow position:
               
chr19:5731588-5731372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
542-742
               

               
Cow position:
               
chr19:14573264-14573056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
546-742
               

               
Cow position:
               
chr19:24005265-24005065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
552-742
               

               
Cow position:
               
chr19:6891905-6892091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
553-742
               

               
Cow position:
               
chr19:37633472-37633666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
555-742
               

               
Cow position:
               
chr19:21115181-21114993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
559-742
               

               
Cow position:
               
chr19:25168421-25168605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
604-742
               

               
Cow position:
               
chr19:13755719-13755577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               
Show alignments to all cow chromosomes.