Cow genome map

Conread name: Mixc-0036l12

Conread position: 250-742
Cow position: chr28:14998272-14997767 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 38

Conread position: 253-728
Cow position: chr28:5204403-5203916 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 330
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 20, 34

Conread position: 255-495
Cow position: chr28:5255074-5254838 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 172, 33

Conread position: 255-696
Cow position: chr28:9740662-9740220 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 297
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 33

Conread position: 257-577
Cow position: chr28:8140685-8140351 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 32

Conread position: 257-614
Cow position: chr28:29988906-29989281 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 34

Conread position: 257-645
Cow position: chr28:4089859-4090241 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 213, 9

Conread position: 257-674
Cow position: chr28:29416523-29416942 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 281
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 32

Conread position: 257-690
Cow position: chr28:4071164-4070724 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 170, 22

Conread position: 257-734
Cow position: chr28:12430807-12430320 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 13

Conread position: 258-693
Cow position: chr28:1099477-1099890 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 291
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 231, 30

Conread position: 259-477
Cow position: chr28:8304441-8304228 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 30

Conread position: 259-645
Cow position: chr28:4159163-4158755 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 280
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 29

Conread position: 259-700
Cow position: chr28:24996419-24996843 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 298
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 92, 37

Conread position: 259-704
Cow position: chr28:16204131-16204589 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 29

Conread position: 259-705
Cow position: chr28:3492588-3493044 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 315
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 99, 27

Conread position: 259-734
Cow position: chr28:21868656-21868162 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 259-734
Cow position: chr28:22371466-22371965 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 11

Conread position: 259-741
Cow position: chr28:13474498-13474011 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 30

Conread position: 259-742
Cow position: chr28:3023717-3024206 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 259-742
Cow position: chr28:3746396-3745906 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 29

Conread position: 262-624
Cow position: chr28:4834647-4835020 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 89, 26

Conread position: 262-734
Cow position: chr28:5684896-5684415 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 27

Conread position: 262-742
Cow position: chr28:16918978-16919458 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 265-632
Cow position: chr28:9684144-9684504 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 21

Conread position: 265-693
Cow position: chr28:16369896-16370322 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 23

Conread position: 265-730
Cow position: chr28:11426355-11426829 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 23

Conread position: 265-742
Cow position: chr28:4282296-4282789 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 329
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 79, 21

Conread position: 265-742
Cow position: chr28:8787732-8787253 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 21

Conread position: 265-742
Cow position: chr28:10978031-10977567 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 321
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 140, 21

Conread position: 292-742
Cow position: chr28:22332700-22332253 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 312
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 59, 229

Conread position: 296-693
Cow position: chr28:22346190-22345771 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 334

Conread position: 297-688
Cow position: chr28:11422651-11423047 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 274
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 270

Conread position: 297-690
Cow position: chr28:16346372-16346771 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 132, 45

Conread position: 298-591
Cow position: chr28:10863632-10863927 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 173, 28

Conread position: 299-742
Cow position: chr28:16210939-16211394 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 223

Conread position: 316-693
Cow position: chr28:2863014-2862613 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 322-680
Cow position: chr28:11884383-11884757 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 313

Conread position: 329-624
Cow position: chr28:2131793-2132097 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 237

Conread position: 338-742
Cow position: chr28:7548936-7549359 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 240

Conread position: 342-681
Cow position: chr28:34133981-34133629 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 207

Conread position: 342-742
Cow position: chr28:6971229-6971636 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 281
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 178

Conread position: 345-734
Cow position: chr28:3914834-3914421 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 274

Conread position: 352-640
Cow position: chr28:26982630-26982938 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 105

Conread position: 352-717
Cow position: chr28:5128620-5128999 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 315

Conread position: 352-741
Cow position: chr28:8021995-8022407 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 280
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 85, 54

Conread position: 355-739
Cow position: chr28:18591375-18590976 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 270
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 115, 333

Conread position: 356-645
Cow position: chr28:4809883-4809597 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 71, 125

Conread position: 356-742
Cow position: chr28:26614977-26614598 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 70, 147

Conread position: 390-667
Cow position: chr28:5144451-5144741 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 149

Conread position: 390-728
Cow position: chr28:30303129-30303476 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 140

Conread position: 390-742
Cow position: chr28:11759493-11759834 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 38

Conread position: 392-741
Cow position: chr28:15043794-15044152 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 23

Conread position: 399-742
Cow position: chr28:7751240-7751598 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 97

Conread position: 434-643
Cow position: chr28:8935954-8935739 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 7, 55

Conread position: 449-742
Cow position: chr28:481453-481752 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 474-742
Cow position: chr28:5311117-5311392 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 496-742
Cow position: chr28:21598304-21598550 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 130, 89

Conread position: 497-737
Cow position: chr28:12458110-12457864 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 497-740
Cow position: chr28:34442807-34443059 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 497-742
Cow position: chr28:7512638-7512887 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 53, 228

Conread position: 498-740
Cow position: chr28:33689717-33689469 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 49

Conread position: 498-742
Cow position: chr28:12964515-12964280 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 128, 29

Conread position: 499-667
Cow position: chr28:5188457-5188620 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 84

Conread position: 499-681
Cow position: chr28:9285427-9285613 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 127, 0

Conread position: 499-719
Cow position: chr28:15263770-15263998 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 203

Conread position: 499-733
Cow position: chr28:13411878-13412118 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 499-734
Cow position: chr28:11931434-11931675 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 176

Conread position: 499-734
Cow position: chr28:13889896-13889655 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 499-734
Cow position: chr28:29658547-29658779 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 97

Conread position: 499-737
Cow position: chr28:3256744-3256509 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 171

Conread position: 499-737
Cow position: chr28:32305045-32305290 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 499-737
Cow position: chr28:34852733-34852489 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 499-740
Cow position: chr28:1172721-1172968 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 499-740
Cow position: chr28:22318698-22318945 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 499-741
Cow position: chr28:23212034-23212281 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 211

Conread position: 499-741
Cow position: chr28:23480311-23480557 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 92

Conread position: 499-742
Cow position: chr28:1509086-1508837 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:1575298-1575547 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:1957570-1957321 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:5904678-5904439 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 170, 26

Conread position: 499-742
Cow position: chr28:6486541-6486301 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 136, 31

Conread position: 499-742
Cow position: chr28:6534590-6534839 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 499-742
Cow position: chr28:6650774-6651023 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:6960448-6960199 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 159

Conread position: 499-742
Cow position: chr28:7060236-7059987 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:7715607-7715856 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:7794206-7794456 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:7936844-7936595 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:7970532-7970781 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:8066735-8066486 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:10192828-10193077 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:10745159-10744908 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 98

Conread position: 499-742
Cow position: chr28:11505067-11505313 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 75

Conread position: 499-742
Cow position: chr28:12259901-12260150 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:12702074-12701825 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:14434282-14434033 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:14610711-14610462 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:15285593-15285841 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 49

Conread position: 499-742
Cow position: chr28:15408489-15408738 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:15605730-15605481 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:15616757-15616508 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:15998314-15998563 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:17687454-17687703 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:17738127-17738376 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 499-742
Cow position: chr28:19186430-19186181 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:19515441-19515689 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 130, 0

Conread position: 499-742
Cow position: chr28:21491219-21491468 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:22083546-22083795 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:23312364-23312613 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:24993694-24993445 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:26782035-26781786 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:27683754-27684003 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:29222085-29222329 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 130

Conread position: 499-742
Cow position: chr28:29683444-29683195 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:30283826-30284075 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:30561416-30561167 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:34007995-34008250 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:34579468-34579717 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:34581163-34581412 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 499-742
Cow position: chr28:34731938-34731689 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 34

Conread position: 500-706
Cow position: chr28:16243813-16244020 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 35

Conread position: 500-734
Cow position: chr28:3751260-3751030 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 126, 18

Conread position: 500-734
Cow position: chr28:5941693-5941453 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 500-738
Cow position: chr28:29455711-29455945 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 131, 95

Conread position: 502-633
Cow position: chr28:13290189-13290319 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 113
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 8

Conread position: 502-667
Cow position: chr28:18625173-18625004 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 82

Conread position: 502-729
Cow position: chr28:10533990-10534213 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 124, 43

Conread position: 502-732
Cow position: chr28:7865268-7865044 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 112

Conread position: 502-732
Cow position: chr28:11733176-11733412 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 502-740
Cow position: chr28:12651551-12651308 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 200

Conread position: 502-740
Cow position: chr28:15107376-15107620 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 502-740
Cow position: chr28:17392769-17392525 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 156

Conread position: 502-742
Cow position: chr28:1199399-1199153 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 502-742
Cow position: chr28:1213599-1213846 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 502-742
Cow position: chr28:2089445-2089199 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 502-742
Cow position: chr28:5071211-5071457 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 502-742
Cow position: chr28:5212540-5212294 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 156

Conread position: 502-742
Cow position: chr28:5270833-5270587 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 502-742
Cow position: chr28:5361066-5361312 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 133

Conread position: 502-742
Cow position: chr28:9709950-9710196 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 502-742
Cow position: chr28:13693695-13693452 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 127

Conread position: 502-742
Cow position: chr28:16364024-16364268 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 7

Conread position: 502-742
Cow position: chr28:20538799-20538553 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 502-742
Cow position: chr28:21766947-21767193 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 156

Conread position: 502-742
Cow position: chr28:22323212-22322968 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 94

Conread position: 502-742
Cow position: chr28:24604120-24603882 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 37

Conread position: 502-742
Cow position: chr28:25892881-25893127 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 502-742
Cow position: chr28:27478969-27478725 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 207

Conread position: 502-742
Cow position: chr28:30099080-30098834 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 156

Conread position: 503-693
Cow position: chr28:25424357-25424550 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 64

Conread position: 503-704
Cow position: chr28:6051676-6051477 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 503-704
Cow position: chr28:16252917-16253114 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 52, 84

Conread position: 503-706
Cow position: chr28:11451520-11451728 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 101

Conread position: 503-717
Cow position: chr28:21103893-21104119 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 109

Conread position: 503-729
Cow position: chr28:6861897-6861667 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 95

Conread position: 503-732
Cow position: chr28:4022328-4022095 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 92

Conread position: 503-734
Cow position: chr28:16214961-16215180 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 67

Conread position: 503-741
Cow position: chr28:21380821-21380585 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 123, 164

Conread position: 503-742
Cow position: chr28:786860-786615 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 503-742
Cow position: chr28:6546439-6546687 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 503-742
Cow position: chr28:20313217-20312977 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 6

Conread position: 503-742
Cow position: chr28:21355166-21354927 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 166, 47

Conread position: 503-742
Cow position: chr28:34082074-34082315 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 74

Conread position: 504-638
Cow position: chr28:23724513-23724645 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 122, 90

Conread position: 504-732
Cow position: chr28:22170774-22171006 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 93

Conread position: 505-734
Cow position: chr28:22254000-22254235 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 505-742
Cow position: chr28:16441324-16441093 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 44, 97

Conread position: 505-742
Cow position: chr28:19295419-19295659 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 77

Conread position: 508-643
Cow position: chr28:27313804-27313943 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 508-667
Cow position: chr28:8408672-8408521 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 508-740
Cow position: chr28:12946886-12946649 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 163

Conread position: 508-742
Cow position: chr28:4588037-4587799 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 131

Conread position: 508-742
Cow position: chr28:4880328-4880561 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 118, 51

Conread position: 509-701
Cow position: chr28:22485185-22484992 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 88

Conread position: 509-734
Cow position: chr28:7196911-7197142 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 509-734
Cow position: chr28:11786775-11786995 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 87

Conread position: 509-734
Cow position: chr28:14933903-14933673 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 509-742
Cow position: chr28:1810804-1811042 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 149

Conread position: 509-742
Cow position: chr28:9268044-9267803 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 509-742
Cow position: chr28:10868214-10868453 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 509-742
Cow position: chr28:13322806-13323045 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 509-742
Cow position: chr28:25411815-25411576 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 509-742
Cow position: chr28:25683012-25683251 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 509-742
Cow position: chr28:27939017-27938778 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 509-742
Cow position: chr28:28214184-28213946 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 74

Conread position: 510-742
Cow position: chr28:20759984-20760221 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 116, 0

Conread position: 513-734
Cow position: chr28:22351423-22351202 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 116, 39

Conread position: 515-740
Cow position: chr28:5054091-5054323 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 516-742
Cow position: chr28:25727308-25727084 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 19

Conread position: 524-737
Cow position: chr28:15063413-15063631 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 524-742
Cow position: chr28:34626961-34626737 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 60

Conread position: 529-741
Cow position: chr28:28116795-28116580 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 40

Conread position: 531-742
Cow position: chr28:2615649-2615866 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 531-742
Cow position: chr28:10871264-10871047 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 539-740
Cow position: chr28:3740752-3740557 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 45

Conread position: 546-736
Cow position: chr28:7372351-7372542 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 42

Conread position: 553-734
Cow position: chr28:14742698-14742511 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 20

Conread position: 559-734
Cow position: chr28:7485289-7485467 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 29

Conread position: 559-734
Cow position: chr28:31223706-31223883 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 37

Conread position: 559-742
Cow position: chr28:5792587-5792408 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 45

Conread position: 561-734
Cow position: chr28:22344593-22344417 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 116

Conread position: 567-735
Cow position: chr28:5837992-5837822 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 28

Conread position: 596-734
Cow position: chr28:25128129-25128272 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 596-742
Cow position: chr28:28792327-28792176 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.