Cow genome map
| Conread name: | Mixc-0036l12 | 
| Conread position: | 255-710 | 
| Cow position: | chr6:52478173-52478658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 28 | 
| Conread position: | 257-692 | 
| Cow position: | chr6:10105747-10106209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 28 | 
| Conread position: | 257-734 | 
| Cow position: | chr6:13687580-13688066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 30 | 
| Conread position: | 257-740 | 
| Cow position: | chr6:49421555-49422043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 92, 22 | 
| Conread position: | 257-742 | 
| Cow position: | chr6:46466054-46465565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 172, 32 | 
| Conread position: | 259-641 | 
| Cow position: | chr6:19264267-19264658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 33 | 
| Conread position: | 259-675 | 
| Cow position: | chr6:15300606-15301009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 209, 29 | 
| Conread position: | 259-678 | 
| Cow position: | chr6:32268653-32269065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 94, 22 | 
| Conread position: | 259-693 | 
| Cow position: | chr6:36203055-36202614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 92, 29 | 
| Conread position: | 259-734 | 
| Cow position: | chr6:24031597-24031120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 29 | 
| Conread position: | 259-742 | 
| Cow position: | chr6:17414205-17414716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 25, 56 | 
| Conread position: | 259-742 | 
| Cow position: | chr6:47520288-47519788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 27 | 
| Conread position: | 260-706 | 
| Cow position: | chr6:4383707-4383266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 94, 28 | 
| Conread position: | 262-724 | 
| Cow position: | chr6:38853425-38853903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 26 | 
| Conread position: | 262-742 | 
| Cow position: | chr6:65871262-65870761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 100, 26 | 
| Conread position: | 264-701 | 
| Cow position: | chr6:38207257-38207717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 75, 24 | 
| Conread position: | 265-707 | 
| Cow position: | chr6:15937624-15938076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 76, 23 | 
| Conread position: | 266-742 | 
| Cow position: | chr6:15305798-15305326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 23 | 
| Conread position: | 297-693 | 
| Cow position: | chr6:44194354-44194759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 26 | 
| Conread position: | 297-693 | 
| Cow position: | chr6:45690416-45690807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 27 | 
| Conread position: | 298-617 | 
| Cow position: | chr6:38640432-38640094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 26, 138 | 
| Conread position: | 302-734 | 
| Cow position: | chr6:8637476-8637020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 319 | 
| Conread position: | 322-742 | 
| Cow position: | chr6:4864374-4864801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 133, 124 | 
| Conread position: | 327-724 | 
| Cow position: | chr6:1002095-1002479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 110, 140 | 
| Conread position: | 329-737 | 
| Cow position: | chr6:8209438-8209843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 64 | 
| Conread position: | 330-707 | 
| Cow position: | chr6:21869482-21869873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 21, 275 | 
| Conread position: | 335-602 | 
| Cow position: | chr6:50976210-50975936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 15, 201 | 
| Conread position: | 335-722 | 
| Cow position: | chr6:54990841-54991235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 22, 10 | 
| Conread position: | 336-667 | 
| Cow position: | chr6:6401109-6400764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 4.99983e-42 | 
| Alignm gaps (pig, cow): | 89, 9 | 
| Conread position: | 346-741 | 
| Cow position: | chr6:31526195-31525790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 91, 148 | 
| Conread position: | 352-664 | 
| Cow position: | chr6:47575049-47574724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 85, 259 | 
| Conread position: | 352-694 | 
| Cow position: | chr6:5609304-5609655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 74, 82 | 
| Conread position: | 352-716 | 
| Cow position: | chr6:20097816-20098201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 79, 277 | 
| Conread position: | 352-734 | 
| Cow position: | chr6:49398477-49398871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 270 | 
| Conread position: | 352-741 | 
| Cow position: | chr6:46571248-46570859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 77, 97 | 
| Conread position: | 355-740 | 
| Cow position: | chr6:12551409-12551007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 111, 191 | 
| Conread position: | 369-733 | 
| Cow position: | chr6:10176176-10176552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 72, 227 | 
| Conread position: | 390-662 | 
| Cow position: | chr6:1703905-1703635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 78, 36 | 
| Conread position: | 390-677 | 
| Cow position: | chr6:7989310-7989609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 39, 67 | 
| Conread position: | 390-693 | 
| Cow position: | chr6:899188-899498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 45, 217 | 
| Conread position: | 390-706 | 
| Cow position: | chr6:130058-130391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 45 | 
| Conread position: | 390-707 | 
| Cow position: | chr6:38218771-38218444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 78, 50 | 
| Conread position: | 390-719 | 
| Cow position: | chr6:9736552-9736879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 69, 117 | 
| Conread position: | 390-734 | 
| Cow position: | chr6:32122012-32121656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 234 | 
| Conread position: | 390-734 | 
| Cow position: | chr6:60474235-60473879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 61, 45 | 
| Conread position: | 391-634 | 
| Cow position: | chr6:61608616-61608356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 391-740 | 
| Cow position: | chr6:24004640-24004286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 44, 91 | 
| Conread position: | 391-742 | 
| Cow position: | chr6:26728428-26728789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 242 | 
| Conread position: | 404-742 | 
| Cow position: | chr6:9375289-9375637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 5, 71 | 
| Conread position: | 406-645 | 
| Cow position: | chr6:12542841-12543095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 28, 22 | 
| Conread position: | 442-742 | 
| Cow position: | chr6:32210587-32210891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 29, 180 | 
| Conread position: | 493-740 | 
| Cow position: | chr6:23695980-23695737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 133, 6 | 
| Conread position: | 496-693 | 
| Cow position: | chr6:16746327-16746126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 54, 135 | 
| Conread position: | 496-707 | 
| Cow position: | chr6:49685568-49685357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 130, 67 | 
| Conread position: | 496-742 | 
| Cow position: | chr6:1770214-1770458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 61, 41 | 
| Conread position: | 497-644 | 
| Cow position: | chr6:50020520-50020369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 497-646 | 
| Cow position: | chr6:58364028-58364175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 128, 97 | 
| Conread position: | 497-691 | 
| Cow position: | chr6:20157314-20157114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 497-737 | 
| Cow position: | chr6:51835381-51835142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 63, 86 | 
| Conread position: | 497-742 | 
| Cow position: | chr6:3978679-3978924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 60, 80 | 
| Conread position: | 497-742 | 
| Cow position: | chr6:25822021-25822266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 62, 78 | 
| Conread position: | 497-742 | 
| Cow position: | chr6:47540514-47540263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 33 | 
| Conread position: | 497-742 | 
| Cow position: | chr6:54365347-54365586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 60, 90 | 
| Conread position: | 498-742 | 
| Cow position: | chr6:54218658-54218409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 498-742 | 
| Cow position: | chr6:56808102-56808352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 498-742 | 
| Cow position: | chr6:66566442-66566193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 499-667 | 
| Cow position: | chr6:16423680-16423515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 126, 12 | 
| Conread position: | 499-677 | 
| Cow position: | chr6:33277024-33276843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 54, 129 | 
| Conread position: | 499-696 | 
| Cow position: | chr6:15923018-15923214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 127, 94 | 
| Conread position: | 499-726 | 
| Cow position: | chr6:56849993-56849771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 167, 83 | 
| Conread position: | 499-732 | 
| Cow position: | chr6:6181590-6181829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-734 | 
| Cow position: | chr6:8562701-8562461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 499-734 | 
| Cow position: | chr6:14839043-14839281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 43, 167 | 
| Conread position: | 499-734 | 
| Cow position: | chr6:29210478-29210247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 124, 77 | 
| Conread position: | 499-737 | 
| Cow position: | chr6:5095566-5095812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 60, 103 | 
| Conread position: | 499-737 | 
| Cow position: | chr6:5279977-5280218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 164 | 
| Conread position: | 499-737 | 
| Cow position: | chr6:18418466-18418710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-737 | 
| Cow position: | chr6:36928637-36928395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 15, 101 | 
| Conread position: | 499-737 | 
| Cow position: | chr6:65838888-65839132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 499-740 | 
| Cow position: | chr6:37737056-37736809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-740 | 
| Cow position: | chr6:60877431-60877184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 60, 159 | 
| Conread position: | 499-740 | 
| Cow position: | chr6:63178256-63178009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-741 | 
| Cow position: | chr6:3157240-3157488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:443792-444041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:595750-595999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 26, 22 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:758359-758110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:1278529-1278774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 60, 106 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:1956785-1957034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:2013000-2012756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 94 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:2185367-2185615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 58, 161 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:2898898-2898649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:3094970-3095219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:5366699-5366948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:6558007-6557758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:6577788-6578037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:6769257-6769014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 76 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:7449631-7449382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:8207362-8207611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:8527282-8527033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:10045341-10045093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 48 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:10459716-10459474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 127, 47 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:11034121-11034370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:11452731-11452980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:13531800-13531551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:13603448-13603204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 118 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:14225207-14225456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:14388590-14388839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:15881689-15881937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 49 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:17935040-17935289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:18648778-18649027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:19737663-19737414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:22736574-22736819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:25096010-25095761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:25347784-25348033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:25363687-25363438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:25376395-25376145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:27541697-27541448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:28184185-28184434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:28293689-28293938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:28343629-28343388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 80 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:32298483-32298731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 26, 22 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:33489099-33489348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:34016587-34016836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:35842636-35842398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 60, 110 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:36299192-36299441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:37217754-37217505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:38916903-38917152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:41034048-41033800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:41471053-41470804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:41822701-41822950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:43014195-43014444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:43429877-43430126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 39, 45 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:43604757-43604508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:43896686-43896935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:44371965-44372206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 130, 41 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:44705355-44705604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:45129937-45130186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:45211280-45211031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:45752069-45751820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:45938414-45938166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 13 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:45976635-45976386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:46371460-46371709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:47383988-47383738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:47624981-47625222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 37, 135 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:48290928-48290679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:49684580-49684829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:49795094-49794845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:52482481-52482232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:53052715-53052466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:53271790-53271541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:54900089-54899840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:55582011-55582260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:55721304-55721055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:57795911-57796160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 39, 45 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:59052554-59052305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:59835214-59834965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:60066459-60066210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 35, 30 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:62418544-62418793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:64131776-64131527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:64337636-64337885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:67429903-67430152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-742 | 
| Cow position: | chr6:68870793-68871042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 499-743 | 
| Cow position: | chr6:2832893-2833139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 60, 97 | 
| Conread position: | 499-743 | 
| Cow position: | chr6:45694997-45694747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 60, 175 | 
| Conread position: | 502-708 | 
| Cow position: | chr6:21542298-21542091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 124, 93 | 
| Conread position: | 502-733 | 
| Cow position: | chr6:58606261-58606028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 36, 74 | 
| Conread position: | 502-734 | 
| Cow position: | chr6:54981087-54980847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-734 | 
| Cow position: | chr6:55610258-55610490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 72, 81 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:1911301-1911057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:10013930-10013686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:10866073-10865829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:13605246-13605490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:13619488-13619732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:20174515-20174271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:20580646-20580890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:33863739-33863495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-740 | 
| Cow position: | chr6:57522308-57522064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-741 | 
| Cow position: | chr6:12390077-12389837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:707127-706881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:3444692-3444933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 57, 156 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:8753326-8753572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:9742298-9742052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:11720795-11721041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:14198777-14198533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 57, 207 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:18502681-18502927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:21718797-21719043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:25789602-25789850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:28276643-28276397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 57, 88 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:34842577-34842822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 57, 99 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:36652397-36652165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 119, 93 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:38061744-38061499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:40710508-40710262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:41232592-41232348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 57, 132 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:47675105-47674860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:51718688-51718442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 57, 173 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:55538144-55538386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 57, 183 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:56843132-56842897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 124, 11 | 
| Conread position: | 502-742 | 
| Cow position: | chr6:58748193-58747947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 503-659 | 
| Cow position: | chr6:61137351-61137195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 123, 52 | 
| Conread position: | 503-667 | 
| Cow position: | chr6:8788060-8788221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 48, 82 | 
| Conread position: | 503-676 | 
| Cow position: | chr6:16191651-16191472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 50, 124 | 
| Conread position: | 503-676 | 
| Cow position: | chr6:53519646-53519816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 54, 75 | 
| Conread position: | 503-680 | 
| Cow position: | chr6:58732329-58732513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 503-684 | 
| Cow position: | chr6:38641471-38641294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 123, 81 | 
| Conread position: | 503-691 | 
| Cow position: | chr6:57405146-57405336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 71, 89 | 
| Conread position: | 503-693 | 
| Cow position: | chr6:48344309-48344114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 503-701 | 
| Cow position: | chr6:3929295-3929099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 123, 91 | 
| Conread position: | 503-732 | 
| Cow position: | chr6:11169675-11169455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 123, 45 | 
| Conread position: | 503-733 | 
| Cow position: | chr6:34196173-34196402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 123, 92 | 
| Conread position: | 503-737 | 
| Cow position: | chr6:64449369-64449134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 55, 95 | 
| Conread position: | 503-740 | 
| Cow position: | chr6:18961539-18961783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 92, 125 | 
| Conread position: | 503-740 | 
| Cow position: | chr6:28477155-28476917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 123, 98 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:642587-642840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:1816887-1817128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 127, 49 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:10332113-10332369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 52, 71 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:20230851-20231088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 50, 77 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:24327164-24327398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 57, 34 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:44099064-44098825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 57, 101 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:54867491-54867249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 56, 84 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:55040234-55040480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 503-742 | 
| Cow position: | chr6:62925020-62925256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 123, 81 | 
| Conread position: | 503-743 | 
| Cow position: | chr6:16411168-16410932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 57, 75 | 
| Conread position: | 504-676 | 
| Cow position: | chr6:416075-415902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 52, 171 | 
| Conread position: | 504-692 | 
| Cow position: | chr6:21110941-21110756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 48, 75 | 
| Conread position: | 504-742 | 
| Cow position: | chr6:37634760-37634527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 122, 71 | 
| Conread position: | 505-624 | 
| Cow position: | chr6:1499615-1499498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 505-701 | 
| Cow position: | chr6:389145-388949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 121, 94 | 
| Conread position: | 505-741 | 
| Cow position: | chr6:44078492-44078254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 121, 38 | 
| Conread position: | 505-741 | 
| Cow position: | chr6:46667087-46666844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 8e-36 | 
| Alignm gaps (pig, cow): | 45, 127 | 
| Conread position: | 505-742 | 
| Cow position: | chr6:2547220-2546980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 89, 13 | 
| Conread position: | 508-653 | 
| Cow position: | chr6:5114073-5114217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 118, 95 | 
| Conread position: | 508-701 | 
| Cow position: | chr6:66453772-66453578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 158, 87 | 
| Conread position: | 508-734 | 
| Cow position: | chr6:52248159-52248392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 117, 188 | 
| Conread position: | 508-742 | 
| Cow position: | chr6:12337961-12337722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 19, 106 | 
| Conread position: | 508-742 | 
| Cow position: | chr6:16700237-16699999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 43, 117 | 
| Conread position: | 508-742 | 
| Cow position: | chr6:53178611-53178377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 52, 87 | 
| Conread position: | 508-742 | 
| Cow position: | chr6:61515219-61515460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 45, 96 | 
| Conread position: | 509-624 | 
| Cow position: | chr6:16316279-16316166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 44, 75 | 
| Conread position: | 509-639 | 
| Cow position: | chr6:50984197-50984068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 51, 69 | 
| Conread position: | 509-733 | 
| Cow position: | chr6:24237227-24237457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 509-734 | 
| Cow position: | chr6:57857854-57857625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 50, 113 | 
| Conread position: | 509-736 | 
| Cow position: | chr6:55607841-55608063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 51, 71 | 
| Conread position: | 509-740 | 
| Cow position: | chr6:12623441-12623210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 28 | 
| Conread position: | 509-740 | 
| Cow position: | chr6:36259080-36258843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 509-741 | 
| Cow position: | chr6:2454086-2453847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:14696399-14696635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 50, 74 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:18988184-18987954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-35 | 
| Alignm gaps (pig, cow): | 117, 78 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:25410582-25410343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:27939903-27939664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:43955678-43955439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:56440954-56441193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:58076201-58075965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 51, 86 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:63047550-63047313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 51, 104 | 
| Conread position: | 509-742 | 
| Cow position: | chr6:67818224-67818463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 513-732 | 
| Cow position: | chr6:35181291-35181506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 45, 24 | 
| Conread position: | 518-742 | 
| Cow position: | chr6:54357414-54357634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 115, 30 | 
| Conread position: | 519-742 | 
| Cow position: | chr6:5958059-5958279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 28 | 
| Conread position: | 523-742 | 
| Cow position: | chr6:17865497-17865277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 36, 14 | 
| Conread position: | 524-734 | 
| Cow position: | chr6:875363-875580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 524-743 | 
| Cow position: | chr6:40320643-40320418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 525-726 | 
| Cow position: | chr6:12845267-12845070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 35, 89 | 
| Conread position: | 539-741 | 
| Cow position: | chr6:27851766-27851966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 11, 44 | 
| Conread position: | 540-742 | 
| Cow position: | chr6:25784252-25784050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 87, 64 | 
| Conread position: | 543-740 | 
| Cow position: | chr6:60467961-60467767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-39 | 
| Alignm gaps (pig, cow): | 83, 69 | 
| Conread position: | 544-742 | 
| Cow position: | chr6:16517921-16518119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 9, 130 | 
| Conread position: | 545-742 | 
| Cow position: | chr6:33865157-33865353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 81, 94 | 
| Conread position: | 545-742 | 
| Cow position: | chr6:53448988-53448785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 550-742 | 
| Cow position: | chr6:30928656-30928853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 555-731 | 
| Cow position: | chr6:11830097-11829914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 558-742 | 
| Cow position: | chr6:54735664-54735477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 16, 25 | 
| Conread position: | 559-742 | 
| Cow position: | chr6:22877240-22877417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 111, 58 | 
| Conread position: | 561-742 | 
| Cow position: | chr6:7801446-7801628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 65, 47 | 
| Conread position: | 563-741 | 
| Cow position: | chr6:32024420-32024600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 63, 21 | 
| Conread position: | 566-742 | 
| Cow position: | chr6:60516649-60516465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 572-734 | 
| Cow position: | chr6:60274312-60274478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 574-733 | 
| Cow position: | chr6:60673455-60673294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 52, 31 | 
| Conread position: | 588-742 | 
| Cow position: | chr6:10682643-10682485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 588-742 | 
| Cow position: | chr6:20689432-20689589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 41, 94 | 
Show alignments to all cow chromosomes.
