Cow genome map


           Conread name:
           Mixc-0036n02
        

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               109, 91
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               171, 181
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-222
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               106, 101
               

               Conread position:
               2-222
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               106, 101
               

               Conread position:
               2-233
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               165, 174
               

               Conread position:
               2-233
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               165, 174
               

               Conread position:
               2-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               164, 170
               

               Conread position:
               2-238
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               171, 180
               

               Conread position:
               2-238
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               175, 144
               

               Conread position:
               2-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-281
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               175, 144
               

               Conread position:
               4-235
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               162, 178
               

               Conread position:
               4-237
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               163, 178
               

               Conread position:
               4-238
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               168, 179
               

               Conread position:
               4-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               162, 178
               

               Conread position:
               4-366
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               127, 170
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               166, 171
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-238
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-290
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-224
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               165, 176
               

               Conread position:
               6-224
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-228
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-233
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               166, 174
               

               Conread position:
               6-234
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               175, 167
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-238
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               96, 87
               

               Conread position:
               7-235
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               160, 175
               

               Conread position:
               7-238
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               233, 272
               

               Conread position:
               10-235
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 76
               

               Conread position:
               11-235
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               161, 171
               

               Conread position:
               11-238
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               156, 163
               

               Conread position:
               12-218
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               146, 158
               

               Conread position:
               12-219
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               138, 134
               

               Conread position:
               12-224
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               12-237
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-238
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-238
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               152, 170
               

               Conread position:
               12-238
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-291
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               160, 170
               

               Conread position:
               13-235
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-235
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               159, 169
               

               Conread position:
               13-245
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               227, 0
               

               Conread position:
               14-218
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               158, 168
               

               Conread position:
               14-220
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               159, 173
               

               Conread position:
               14-236
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 92
               

               Conread position:
               14-238
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               152, 168
               

               Conread position:
               14-368
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 89
               

               Conread position:
               15-218
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               152, 167
               

               Conread position:
               18-222
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               18-233
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               154, 158
               

               Conread position:
               18-271
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               18-271
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 70
               

               Conread position:
               22-238
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-234
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               132, 147
               

               Conread position:
               42-238
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               130, 140
               

               Conread position:
               42-291
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               213, 198
               

               Conread position:
               54-234
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.