Cow genome map


           Conread name:
           Mixc-0036n02
        

               Conread position:
               1-234
               

               Cow position:
               chr6:49341210-49340977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-195
               

               Cow position:
               chr6:49396426-49396233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               2-234
               

               Cow position:
               chr6:49340957-49340725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               171, 181
               

               Conread position:
               2-238
               

               Cow position:
               chr6:49341377-49341141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               170, 180
               

               Conread position:
               3-235
               

               Cow position:
               chr6:49341124-49340892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               155, 161
               

               Conread position:
               3-238
               

               Cow position:
               chr6:49340872-49340637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               155, 159
               

               Conread position:
               4-238
               

               Cow position:
               chr6:49341291-49341057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               154, 178
               

               Conread position:
               5-234
               

               Cow position:
               chr6:49340786-49340557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               153, 177
               

               Conread position:
               5-236
               

               Cow position:
               chr6:49340618-49340387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               153, 159
               

               Conread position:
               5-238
               

               Cow position:
               chr6:49340702-49340469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               168, 178
               

               Conread position:
               5-267
               

               Cow position:
               chr6:49341456-49341196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               167, 6
               
Show alignments to all cow chromosomes.