Non-Coding RNA Search

Cow genome map


           Conread name:
           Mixc-0039,k14
        

               Conread position:
               1-603
               

               Cow position:
               chr7:32894718-32894103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 412
               

               Conread position:
               1-603
               

               Cow position:
               chr7:40953328-40952720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 98
               

               Conread position:
               1-603
               

               Cow position:
               chr7:52719105-52718494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 143
               

               Conread position:
               1-603
               

               Cow position:
               chr7:65121892-65122477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 182
               

               Conread position:
               2-447
               

               Cow position:
               chr7:27136035-27136492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               2-447
               

               Cow position:
               chr7:58196391-58195936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 238
               

               Conread position:
               2-532
               

               Cow position:
               chr7:24778575-24778048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 86
               

               Conread position:
               2-563
               

               Cow position:
               chr7:32277065-32277643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 296
               

               Conread position:
               2-564
               

               Cow position:
               chr7:62602733-62603283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 164
               

               Conread position:
               2-565
               

               Cow position:
               chr7:25703691-25703117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 181
               

               Conread position:
               2-565
               

               Cow position:
               chr7:56098144-56098713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 296
               

               Conread position:
               2-566
               

               Cow position:
               chr7:12408721-12408132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 236
               

               Conread position:
               2-571
               

               Cow position:
               chr7:45927615-45927052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 191
               

               Conread position:
               2-602
               

               Cow position:
               chr7:8868366-8868971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 168
               

               Conread position:
               2-603
               

               Cow position:
               chr7:10122256-10122837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               609
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               2-603
               

               Cow position:
               chr7:39147331-39147948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               2-603
               

               Cow position:
               chr7:39163929-39164536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               2-603
               

               Cow position:
               chr7:46857419-46856818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 247
               

               Conread position:
               2-603
               

               Cow position:
               chr7:59688068-59688683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 289
               

               Conread position:
               3-386
               

               Cow position:
               chr7:13645825-13645425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               3-394
               

               Cow position:
               chr7:17950415-17950796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               105, 34
               

               Conread position:
               3-397
               

               Cow position:
               chr7:35300989-35300607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 78
               

               Conread position:
               3-404
               

               Cow position:
               chr7:62544387-62543956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 160
               

               Conread position:
               3-437
               

               Cow position:
               chr7:17269803-17269379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 81
               

               Conread position:
               3-439
               

               Cow position:
               chr7:20967981-20968417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 107
               

               Conread position:
               3-444
               

               Cow position:
               chr7:68050650-68051089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 217
               

               Conread position:
               3-445
               

               Cow position:
               chr7:4139173-4138741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               3-446
               

               Cow position:
               chr7:12994696-12995150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               3-446
               

               Cow position:
               chr7:21326594-21327023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               3-447
               

               Cow position:
               chr7:194140-193681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 271
               

               Conread position:
               3-447
               

               Cow position:
               chr7:23099505-23099053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 241
               

               Conread position:
               3-447
               

               Cow position:
               chr7:45945095-45944636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 342
               

               Conread position:
               3-456
               

               Cow position:
               chr7:33068762-33068297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 458
               

               Conread position:
               3-456
               

               Cow position:
               chr7:36128526-36129001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 408
               

               Conread position:
               3-456
               

               Cow position:
               chr7:65977733-65978191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               319
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               61, 239
               

               Conread position:
               3-461
               

               Cow position:
               chr7:20289721-20289269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 186
               

               Conread position:
               3-464
               

               Cow position:
               chr7:15654536-15654068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               3-465
               

               Cow position:
               chr7:45658818-45658379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 29
               

               Conread position:
               3-472
               

               Cow position:
               chr7:35778989-35779466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               3-478
               

               Cow position:
               chr7:8785503-8785983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 271
               

               Conread position:
               3-478
               

               Cow position:
               chr7:53153570-53153094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 120
               

               Conread position:
               3-479
               

               Cow position:
               chr7:42431359-42431851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 243
               

               Conread position:
               3-481
               

               Cow position:
               chr7:40916114-40916606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 222
               

               Conread position:
               3-481
               

               Cow position:
               chr7:44544532-44544048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               3-485
               

               Cow position:
               chr7:58362468-58362980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 234
               

               Conread position:
               3-488
               

               Cow position:
               chr7:32824714-32824224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 135
               

               Conread position:
               3-490
               

               Cow position:
               chr7:26993146-26993649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 225
               

               Conread position:
               3-498
               

               Cow position:
               chr7:20779675-20780195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 190
               

               Conread position:
               3-502
               

               Cow position:
               chr7:53992243-53992744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               3-504
               

               Cow position:
               chr7:35652540-35652029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 237
               

               Conread position:
               3-507
               

               Cow position:
               chr7:56887237-56886738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 214
               

               Conread position:
               3-508
               

               Cow position:
               chr7:34003894-34004397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 281
               

               Conread position:
               3-516
               

               Cow position:
               chr7:13928600-13928097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 75
               

               Conread position:
               3-519
               

               Cow position:
               chr7:46148414-46148917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               3-520
               

               Cow position:
               chr7:18872752-18873272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 464
               

               Conread position:
               3-522
               

               Cow position:
               chr7:26771409-26771932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               3-524
               

               Cow position:
               chr7:205298-205802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 10
               

               Conread position:
               3-527
               

               Cow position:
               chr7:40991231-40991771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 264
               

               Conread position:
               3-529
               

               Cow position:
               chr7:22357952-22357414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 461
               

               Conread position:
               3-529
               

               Cow position:
               chr7:36745849-36746398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               554
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 356
               

               Conread position:
               3-529
               

               Cow position:
               chr7:68867646-68868171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               3-532
               

               Cow position:
               chr7:53268730-53269271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 201
               

               Conread position:
               3-534
               

               Cow position:
               chr7:40120986-40121539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 145
               

               Conread position:
               3-534
               

               Cow position:
               chr7:64236749-64236211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 136
               

               Conread position:
               3-537
               

               Cow position:
               chr7:39929810-39930368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 383
               

               Conread position:
               3-538
               

               Cow position:
               chr7:34433741-34433205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               3-540
               

               Cow position:
               chr7:24932860-24932334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               3-543
               

               Cow position:
               chr7:268525-269058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 173
               

               Conread position:
               3-543
               

               Cow position:
               chr7:20794747-20794182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 84
               

               Conread position:
               3-549
               

               Cow position:
               chr7:52294666-52295220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               3-549
               

               Cow position:
               chr7:58614345-58614878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 130
               

               Conread position:
               3-557
               

               Cow position:
               chr7:19267832-19267271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 452
               

               Conread position:
               3-557
               

               Cow position:
               chr7:36247646-36248196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 278
               

               Conread position:
               3-558
               

               Cow position:
               chr7:24767696-24767129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 287
               

               Conread position:
               3-558
               

               Cow position:
               chr7:26838191-26838768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               585
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               3-558
               

               Cow position:
               chr7:32316438-32316995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 314
               

               Conread position:
               3-558
               

               Cow position:
               chr7:34428097-34428676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               584
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 469
               

               Conread position:
               3-558
               

               Cow position:
               chr7:37568566-37569149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 5
               

               Conread position:
               3-561
               

               Cow position:
               chr7:14542514-14541966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 282
               

               Conread position:
               3-561
               

               Cow position:
               chr7:66895002-66894436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 423
               

               Conread position:
               3-562
               

               Cow position:
               chr7:18303355-18302791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               3-563
               

               Cow position:
               chr7:1721430-1720864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 238
               

               Conread position:
               3-563
               

               Cow position:
               chr7:14005423-14005987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 85
               

               Conread position:
               3-563
               

               Cow position:
               chr7:19466723-19466144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               590
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 276
               

               Conread position:
               3-563
               

               Cow position:
               chr7:39939279-39939842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               3-563
               

               Cow position:
               chr7:58966812-58967373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               3-563
               

               Cow position:
               chr7:59558619-59558071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               578
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 230
               

               Conread position:
               3-565
               

               Cow position:
               chr7:1261557-1262136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 204
               

               Conread position:
               3-565
               

               Cow position:
               chr7:23257321-23256747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 243
               

               Conread position:
               3-565
               

               Cow position:
               chr7:27388448-27387868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 155
               

               Conread position:
               3-565
               

               Cow position:
               chr7:43234920-43234337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               593
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 267
               

               Conread position:
               3-565
               

               Cow position:
               chr7:46823206-46823777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               3-565
               

               Cow position:
               chr7:53986447-53985890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 192
               

               Conread position:
               3-565
               

               Cow position:
               chr7:64229364-64228785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               584
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 462
               

               Conread position:
               3-570
               

               Cow position:
               chr7:35892952-35893529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 154
               

               Conread position:
               3-571
               

               Cow position:
               chr7:44590312-44589745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               3-581
               

               Cow position:
               chr7:26011949-26012562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 210
               

               Conread position:
               3-587
               

               Cow position:
               chr7:18964456-18965038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 332
               

               Conread position:
               3-589
               

               Cow position:
               chr7:30276271-30276866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 101
               

               Conread position:
               3-596
               

               Cow position:
               chr7:42296532-42295940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               609
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 149
               

               Conread position:
               3-597
               

               Cow position:
               chr7:58170268-58170878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 187
               

               Conread position:
               3-600
               

               Cow position:
               chr7:52383447-52382837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               624
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 123
               

               Conread position:
               3-601
               

               Cow position:
               chr7:48243213-48243815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 273
               

               Conread position:
               3-601
               

               Cow position:
               chr7:62793320-62793940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 205
               

               Conread position:
               3-602
               

               Cow position:
               chr7:11870296-11869696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 182
               

               Conread position:
               3-602
               

               Cow position:
               chr7:29301215-29300623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 211
               

               Conread position:
               3-602
               

               Cow position:
               chr7:49750675-49751268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               3-602
               

               Cow position:
               chr7:53988581-53989194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 294
               

               Conread position:
               3-603
               

               Cow position:
               chr7:4452138-4452749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 237
               

               Conread position:
               3-603
               

               Cow position:
               chr7:9146175-9146787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 290
               

               Conread position:
               3-603
               

               Cow position:
               chr7:13593326-13593913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 124
               

               Conread position:
               3-603
               

               Cow position:
               chr7:14631912-14632510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 382
               

               Conread position:
               3-603
               

               Cow position:
               chr7:15566306-15566897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 266
               

               Conread position:
               3-603
               

               Cow position:
               chr7:17816297-17816894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 137
               

               Conread position:
               3-603
               

               Cow position:
               chr7:20534412-20535017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               625
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 277
               

               Conread position:
               3-603
               

               Cow position:
               chr7:23206097-23205483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 351
               

               Conread position:
               3-603
               

               Cow position:
               chr7:23646138-23646756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               629
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 213
               

               Conread position:
               3-603
               

               Cow position:
               chr7:34412751-34412133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 137
               

               Conread position:
               3-603
               

               Cow position:
               chr7:43109991-43109395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 177
               

               Conread position:
               3-603
               

               Cow position:
               chr7:44597162-44596557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               3-603
               

               Cow position:
               chr7:45157670-45158262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 270
               

               Conread position:
               3-603
               

               Cow position:
               chr7:51019333-51019923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               617
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 139
               

               Conread position:
               3-603
               

               Cow position:
               chr7:58302409-58301794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 459
               

               Conread position:
               3-603
               

               Cow position:
               chr7:61824305-61823705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               618
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               3-603
               

               Cow position:
               chr7:62193106-62193710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 228
               

               Conread position:
               4-412
               

               Cow position:
               chr7:18499257-18498859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               4-443
               

               Cow position:
               chr7:10070161-10069726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 104
               

               Conread position:
               4-471
               

               Cow position:
               chr7:1032976-1032493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               4-472
               

               Cow position:
               chr7:12659459-12658979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 437
               

               Conread position:
               4-476
               

               Cow position:
               chr7:63771452-63771925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 50
               

               Conread position:
               4-477
               

               Cow position:
               chr7:43940876-43941341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               4-478
               

               Cow position:
               chr7:43784162-43784626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               4-482
               

               Cow position:
               chr7:40570806-40571292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 129
               

               Conread position:
               4-519
               

               Cow position:
               chr7:21572825-21573351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 268
               

               Conread position:
               4-519
               

               Cow position:
               chr7:40311826-40311288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               367
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               4-524
               

               Cow position:
               chr7:59713005-59713533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 207
               

               Conread position:
               4-565
               

               Cow position:
               chr7:39154643-39155221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 148
               

               Conread position:
               4-570
               

               Cow position:
               chr7:67816427-67817010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 362
               

               Conread position:
               4-587
               

               Cow position:
               chr7:34553781-34554388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               616
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 318
               

               Conread position:
               4-601
               

               Cow position:
               chr7:26632275-26631669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               613
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 194
               

               Conread position:
               4-601
               

               Cow position:
               chr7:39903648-39904238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               611
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 59
               

               Conread position:
               4-603
               

               Cow position:
               chr7:4130249-4129635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               626
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 16
               

               Conread position:
               4-603
               

               Cow position:
               chr7:48666964-48667559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               5-453
               

               Cow position:
               chr7:63298816-63299256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 234
               

               Conread position:
               5-558
               

               Cow position:
               chr7:11783881-11783328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               567
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 270
               

               Conread position:
               5-561
               

               Cow position:
               chr7:27991136-27990577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               572
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 16
               

               Conread position:
               5-603
               

               Cow position:
               chr7:53698377-53697762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 487
               

               Conread position:
               6-519
               

               Cow position:
               chr7:28427564-28428066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 232
               

               Conread position:
               6-564
               

               Cow position:
               chr7:59691615-59692179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 234
               

               Conread position:
               6-569
               

               Cow position:
               chr7:7107274-7106672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 299
               

               Conread position:
               6-601
               

               Cow position:
               chr7:41328480-41327891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               6-603
               

               Cow position:
               chr7:31171408-31170810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               613
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 151
               

               Conread position:
               6-603
               

               Cow position:
               chr7:39325306-39325871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 70
               

               Conread position:
               7-466
               

               Cow position:
               chr7:54638083-54637619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 148
               

               Conread position:
               7-601
               

               Cow position:
               chr7:19982280-19981703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               605
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 67
               

               Conread position:
               7-603
               

               Cow position:
               chr7:25512581-25511979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 358
               

               Conread position:
               7-603
               

               Cow position:
               chr7:28563840-28563245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 197
               

               Conread position:
               8-461
               

               Cow position:
               chr7:63085109-63085562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               9-468
               

               Cow position:
               chr7:53034776-53034309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 323
               

               Conread position:
               9-538
               

               Cow position:
               chr7:53361839-53361312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 339
               

               Conread position:
               9-603
               

               Cow position:
               chr7:53772765-53772169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               621
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 194
               

               Conread position:
               10-603
               

               Cow position:
               chr7:6041551-6042117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 103
               

               Conread position:
               10-603
               

               Cow position:
               chr7:6057672-6058273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               615
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 389
               

               Conread position:
               11-603
               

               Cow position:
               chr7:33697516-33698099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               609
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 207
               

               Conread position:
               11-603
               

               Cow position:
               chr7:61551443-61552065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 282
               

               Conread position:
               12-529
               

               Cow position:
               chr7:50076179-50075658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 208
               

               Conread position:
               12-569
               

               Cow position:
               chr7:18544829-18544270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 253
               

               Conread position:
               13-572
               

               Cow position:
               chr7:3336993-3336436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 228
               

               Conread position:
               16-477
               

               Cow position:
               chr7:23664545-23664070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 224
               

               Conread position:
               16-527
               

               Cow position:
               chr7:61818386-61817869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 271
               

               Conread position:
               16-603
               

               Cow position:
               chr7:49647911-49648502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 312
               

               Conread position:
               20-602
               

               Cow position:
               chr7:48019981-48020572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               612
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 76
               

               Conread position:
               25-422
               

               Cow position:
               chr7:54583240-54583640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 248
               

               Conread position:
               25-488
               

               Cow position:
               chr7:23619526-23619052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               27-537
               

               Cow position:
               chr7:34715798-34716322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 441
               

               Conread position:
               30-464
               

               Cow position:
               chr7:21526843-21526399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 344
               

               Conread position:
               30-563
               

               Cow position:
               chr7:18388833-18388293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 211
               

               Conread position:
               30-563
               

               Cow position:
               chr7:46117086-46116533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               558
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               30-601
               

               Cow position:
               chr7:38081723-38082299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 184
               

               Conread position:
               30-603
               

               Cow position:
               chr7:37361444-37362021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               594
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 143
               

               Conread position:
               34-529
               

               Cow position:
               chr7:39042166-39042666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 178
               

               Conread position:
               36-587
               

               Cow position:
               chr7:67838913-67839471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 107
               

               Conread position:
               36-601
               

               Cow position:
               chr7:64948679-64949250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 250
               

               Conread position:
               37-597
               

               Cow position:
               chr7:63749896-63749337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 116
               

               Conread position:
               38-506
               

               Cow position:
               chr7:39529415-39528946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 122
               

               Conread position:
               38-603
               

               Cow position:
               chr7:40566651-40567213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               39-419
               

               Cow position:
               chr7:7096478-7096080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               39-603
               

               Cow position:
               chr7:64364953-64364383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 191
               

               Conread position:
               44-437
               

               Cow position:
               chr7:16665854-16666258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               44-601
               

               Cow position:
               chr7:68171030-68170456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 335
               

               Conread position:
               49-503
               

               Cow position:
               chr7:39401535-39402001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 97
               

               Conread position:
               51-603
               

               Cow position:
               chr7:28916667-28917236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               582
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 63
               

               Conread position:
               54-529
               

               Cow position:
               chr7:42429456-42429945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 427
               

               Conread position:
               57-603
               

               Cow position:
               chr7:36569454-36570008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               58-519
               

               Cow position:
               chr7:54089795-54090267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               58-537
               

               Cow position:
               chr7:34669703-34670189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               335
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               58-579
               

               Cow position:
               chr7:45592628-45593160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 196
               

               Conread position:
               58-603
               

               Cow position:
               chr7:32711387-32710840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               562
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               63-603
               

               Cow position:
               chr7:36664927-36665466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               555
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 396
               

               Conread position:
               65-601
               

               Cow position:
               chr7:54712023-54712564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               550
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 56
               

               Conread position:
               78-603
               

               Cow position:
               chr7:53053777-53053258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               81-433
               

               Cow position:
               chr7:18248191-18247829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 130
               

               Conread position:
               84-519
               

               Cow position:
               chr7:12212995-12212541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 121
               

               Conread position:
               84-524
               

               Cow position:
               chr7:20469111-20469543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 180
               

               Conread position:
               84-558
               

               Cow position:
               chr7:57259409-57258923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               84-601
               

               Cow position:
               chr7:15569667-15570181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               84-601
               

               Cow position:
               chr7:40709729-40710270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 525
               

               Conread position:
               84-603
               

               Cow position:
               chr7:9193621-9193092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 154
               

               Conread position:
               84-603
               

               Cow position:
               chr7:23457178-23456676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               84-603
               

               Cow position:
               chr7:60483803-60483283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 196
               

               Conread position:
               85-447
               

               Cow position:
               chr7:40324010-40324384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 187
               

               Conread position:
               85-459
               

               Cow position:
               chr7:18310426-18310040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               25, 376
               

               Conread position:
               85-459
               

               Cow position:
               chr7:27996789-27996408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               26, 211
               

               Conread position:
               85-461
               

               Cow position:
               chr7:24797067-24796689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               85-569
               

               Cow position:
               chr7:4418842-4418348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 132
               

               Conread position:
               85-603
               

               Cow position:
               chr7:39149562-39150095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 111
               

               Conread position:
               86-424
               

               Cow position:
               chr7:53786360-53785991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               264
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               87-525
               

               Cow position:
               chr7:25860572-25860131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               88-549
               

               Cow position:
               chr7:27994744-27994281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               88-602
               

               Cow position:
               chr7:29280393-29279876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               88-603
               

               Cow position:
               chr7:27079264-27079772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 137
               

               Conread position:
               88-603
               

               Cow position:
               chr7:40074317-40074829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 184
               

               Conread position:
               89-565
               

               Cow position:
               chr7:47547020-47547516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 194
               

               Conread position:
               89-603
               

               Cow position:
               chr7:44454640-44454135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               526
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 173
               

               Conread position:
               90-601
               

               Cow position:
               chr7:23569114-23568593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 347
               

               Conread position:
               92-529
               

               Cow position:
               chr7:32714196-32714640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 187
               

               Conread position:
               92-603
               

               Cow position:
               chr7:49106567-49106056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               93-384
               

               Cow position:
               chr7:60869362-60869659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 138
               

               Conread position:
               93-519
               

               Cow position:
               chr7:7476814-7476389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 98
               

               Conread position:
               97-571
               

               Cow position:
               chr7:2923275-2923761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 362
               

               Conread position:
               98-603
               

               Cow position:
               chr7:43710854-43711359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               106-521
               

               Cow position:
               chr7:55706729-55706325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 120
               

               Conread position:
               106-543
               

               Cow position:
               chr7:34979013-34979462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 245
               

               Conread position:
               106-571
               

               Cow position:
               chr7:48358663-48359120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               107-510
               

               Cow position:
               chr7:16220480-16220076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 167
               

               Conread position:
               109-460
               

               Cow position:
               chr7:61128866-61129224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 181
               

               Conread position:
               112-601
               

               Cow position:
               chr7:52785145-52784663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               114-464
               

               Cow position:
               chr7:28324303-28324643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               128, 64
               

               Conread position:
               115-601
               

               Cow position:
               chr7:11066141-11066622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               115-603
               

               Cow position:
               chr7:2172410-2172895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 239
               

               Conread position:
               116-395
               

               Cow position:
               chr7:11903659-11903946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               27, 132
               

               Conread position:
               116-483
               

               Cow position:
               chr7:34198979-34199356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 338
               

               Conread position:
               116-527
               

               Cow position:
               chr7:31204866-31204452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 21
               

               Conread position:
               116-529
               

               Cow position:
               chr7:28583903-28584315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               116-591
               

               Cow position:
               chr7:56820920-56820449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 334
               

               Conread position:
               117-561
               

               Cow position:
               chr7:51321378-51321839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 82
               

               Conread position:
               119-564
               

               Cow position:
               chr7:4583077-4582622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               122-565
               

               Cow position:
               chr7:25445063-25445504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 41
               

               Conread position:
               123-565
               

               Cow position:
               chr7:51708729-51708272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               304
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               59, 290
               

               Conread position:
               125-503
               

               Cow position:
               chr7:28089904-28090276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 144
               

               Conread position:
               125-570
               

               Cow position:
               chr7:35275405-35274968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 113
               

               Conread position:
               125-597
               

               Cow position:
               chr7:67819787-67820255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               126-436
               

               Cow position:
               chr7:5034411-5034734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               126-545
               

               Cow position:
               chr7:42223283-42222855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 233
               

               Conread position:
               127-589
               

               Cow position:
               chr7:2896427-2896890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 28
               

               Conread position:
               129-539
               

               Cow position:
               chr7:10099670-10099281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 94
               

               Conread position:
               129-570
               

               Cow position:
               chr7:27509385-27509827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 195
               

               Conread position:
               130-452
               

               Cow position:
               chr7:61601701-61601382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               130-527
               

               Cow position:
               chr7:24851319-24850935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               173, 45
               

               Conread position:
               130-587
               

               Cow position:
               chr7:42245044-42244572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 320
               

               Conread position:
               131-447
               

               Cow position:
               chr7:14187571-14187248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 293
               

               Conread position:
               131-456
               

               Cow position:
               chr7:65618575-65618243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               131-601
               

               Cow position:
               chr7:39129911-39129465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               322
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               134-603
               

               Cow position:
               chr7:35286941-35286495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               135-482
               

               Cow position:
               chr7:29474366-29474713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 134
               

               Conread position:
               136-453
               

               Cow position:
               chr7:43803393-43803714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 201
               

               Conread position:
               137-603
               

               Cow position:
               chr7:53381873-53382340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               144-578
               

               Cow position:
               chr7:17756727-17757153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               144-603
               

               Cow position:
               chr7:47514007-47513540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               147-471
               

               Cow position:
               chr7:44697591-44697894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               147-565
               

               Cow position:
               chr7:55077000-55076592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               151-601
               

               Cow position:
               chr7:40189241-40189693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               154-523
               

               Cow position:
               chr7:51071932-51072306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               155-551
               

               Cow position:
               chr7:39517994-39518386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 205
               

               Conread position:
               159-388
               

               Cow position:
               chr7:56615153-56615384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               159-603
               

               Cow position:
               chr7:10513015-10512568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 200
               

               Conread position:
               159-603
               

               Cow position:
               chr7:63707591-63707172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               160-564
               

               Cow position:
               chr7:40321193-40321594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               162-558
               

               Cow position:
               chr7:9074756-9075152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 187
               

               Conread position:
               162-603
               

               Cow position:
               chr7:14536563-14536136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 16
               

               Conread position:
               163-444
               

               Cow position:
               chr7:38024609-38024325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               163-447
               

               Cow position:
               chr7:14134580-14134286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               164-387
               

               Cow position:
               chr7:3570157-3569931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 128
               

               Conread position:
               164-394
               

               Cow position:
               chr7:13219688-13219455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               164-563
               

               Cow position:
               chr7:64269280-64268888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 71
               

               Conread position:
               164-603
               

               Cow position:
               chr7:36533735-36534168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               312
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               166-589
               

               Cow position:
               chr7:2884048-2884468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 166
               

               Conread position:
               173-563
               

               Cow position:
               chr7:53097311-53097697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 95
               

               Conread position:
               174-519
               

               Cow position:
               chr7:33804690-33805028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               175-534
               

               Cow position:
               chr7:10551255-10550901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 148
               

               Conread position:
               175-538
               

               Cow position:
               chr7:20415590-20415211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 94
               

               Conread position:
               175-567
               

               Cow position:
               chr7:28057402-28057000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               7, 257
               

               Conread position:
               175-582
               

               Cow position:
               chr7:26485296-26485695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               181-530
               

               Cow position:
               chr7:32819532-32819888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 275
               

               Conread position:
               181-603
               

               Cow position:
               chr7:23679872-23679440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 42
               

               Conread position:
               182-529
               

               Cow position:
               chr7:23657553-23657905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               66, 86
               

               Conread position:
               183-420
               

               Cow position:
               chr7:22727612-22727847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               184-565
               

               Cow position:
               chr7:21649826-21650206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 59
               

               Conread position:
               184-601
               

               Cow position:
               chr7:14450079-14450468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               185-601
               

               Cow position:
               chr7:40067374-40067803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 277
               

               Conread position:
               187-529
               

               Cow position:
               chr7:48289088-48289441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               188-542
               

               Cow position:
               chr7:40693621-40693957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               54, 92
               

               Conread position:
               188-603
               

               Cow position:
               chr7:11176978-11176584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               190-527
               

               Cow position:
               chr7:63968472-63968146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               190-536
               

               Cow position:
               chr7:32791419-32791775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               190-603
               

               Cow position:
               chr7:9136571-9136983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               191-442
               

               Cow position:
               chr7:57244357-57244103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               191-527
               

               Cow position:
               chr7:21240379-21240050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 78
               

               Conread position:
               196-563
               

               Cow position:
               chr7:39444863-39444506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               197-563
               

               Cow position:
               chr7:47932060-47931690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 141
               

               Conread position:
               197-601
               

               Cow position:
               chr7:25393026-25393442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               199-472
               

               Cow position:
               chr7:10943115-10942834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               114, 44
               

               Conread position:
               199-601
               

               Cow position:
               chr7:59844023-59843607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 173
               

               Conread position:
               201-603
               

               Cow position:
               chr7:32914855-32915260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 33
               

               Conread position:
               203-537
               

               Cow position:
               chr7:65689788-65689457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               39, 152
               

               Conread position:
               203-587
               

               Cow position:
               chr7:57537785-57537394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               10, 201
               

               Conread position:
               206-461
               

               Cow position:
               chr7:54784061-54783815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               104, 24
               

               Conread position:
               206-537
               

               Cow position:
               chr7:40192484-40192823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               209-430
               

               Cow position:
               chr7:48900084-48899867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               151, 11
               

               Conread position:
               209-480
               

               Cow position:
               chr7:8813175-8812903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 28
               

               Conread position:
               209-603
               

               Cow position:
               chr7:15755701-15755301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 241
               

               Conread position:
               211-549
               

               Cow position:
               chr7:47503408-47503747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               212-444
               

               Cow position:
               chr7:39103673-39103445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               214-446
               

               Cow position:
               chr7:10449030-10448791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               215-601
               

               Cow position:
               chr7:24220426-24220811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               217-600
               

               Cow position:
               chr7:10943796-10943418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               218-565
               

               Cow position:
               chr7:14076513-14076175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               25, 181
               

               Conread position:
               218-603
               

               Cow position:
               chr7:27283436-27283819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 235
               

               Conread position:
               218-603
               

               Cow position:
               chr7:48722148-48721761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               219-596
               

               Cow position:
               chr7:36278052-36278436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               219-601
               

               Cow position:
               chr7:31315081-31315451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               220-463
               

               Cow position:
               chr7:29302596-29302345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               220-537
               

               Cow position:
               chr7:60121274-60121605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               5, 94
               

               Conread position:
               220-587
               

               Cow position:
               chr7:23177292-23177668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 193
               

               Conread position:
               220-596
               

               Cow position:
               chr7:3283124-3283497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               268
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               220-603
               

               Cow position:
               chr7:45331304-45331683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 189
               

               Conread position:
               221-446
               

               Cow position:
               chr7:57610514-57610745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               22, 200
               

               Conread position:
               222-424
               

               Cow position:
               chr7:32693289-32693084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 115
               

               Conread position:
               222-603
               

               Cow position:
               chr7:40894282-40894687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               223-461
               

               Cow position:
               chr7:29010631-29010393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               19, 123
               

               Conread position:
               223-529
               

               Cow position:
               chr7:58427858-58428147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               224-603
               

               Cow position:
               chr7:34422501-34422127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               225-601
               

               Cow position:
               chr7:33385698-33386065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 116
               

               Conread position:
               226-563
               

               Cow position:
               chr7:40008583-40008935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 229
               

               Conread position:
               226-563
               

               Cow position:
               chr7:63378158-63378500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               226-603
               

               Cow position:
               chr7:28095651-28096015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               16, 160
               

               Conread position:
               227-481
               

               Cow position:
               chr7:44549406-44549151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               228-593
               

               Cow position:
               chr7:25496511-25496859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               229-582
               

               Cow position:
               chr7:26911669-26911316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 134
               

               Conread position:
               230-477
               

               Cow position:
               chr7:3176179-3175930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               12, 83
               

               Conread position:
               230-529
               

               Cow position:
               chr7:42460205-42460516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               230-603
               

               Cow position:
               chr7:42894222-42894594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 5
               

               Conread position:
               233-529
               

               Cow position:
               chr7:30156185-30155883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               234-455
               

               Cow position:
               chr7:43184577-43184799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 40
               

               Conread position:
               234-471
               

               Cow position:
               chr7:31881461-31881691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               234-476
               

               Cow position:
               chr7:59646088-59645845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 175
               

               Conread position:
               234-477
               

               Cow position:
               chr7:24213654-24213903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               234-528
               

               Cow position:
               chr7:600117-600403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               234-537
               

               Cow position:
               chr7:37951954-37952254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               234-558
               

               Cow position:
               chr7:66180027-66179691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               8, 223
               

               Conread position:
               234-577
               

               Cow position:
               chr7:53612921-53613252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               76, 8
               

               Conread position:
               234-596
               

               Cow position:
               chr7:44049591-44049233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 41
               

               Conread position:
               234-597
               

               Cow position:
               chr7:36830436-36830790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               234-603
               

               Cow position:
               chr7:60153209-60153596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               8, 228
               

               Conread position:
               235-470
               

               Cow position:
               chr7:67433702-67433926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               235-477
               

               Cow position:
               chr7:26665781-26665535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               80, 7
               

               Conread position:
               236-453
               

               Cow position:
               chr7:55316699-55316482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               236-566
               

               Cow position:
               chr7:48548084-48547753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               6, 25
               

               Conread position:
               237-528
               

               Cow position:
               chr7:25015343-25015053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               237-568
               

               Cow position:
               chr7:34223467-34223804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               237-601
               

               Cow position:
               chr7:69066474-69066839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               238-524
               

               Cow position:
               chr7:44095163-44094871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               238-601
               

               Cow position:
               chr7:59168055-59168408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               240-455
               

               Cow position:
               chr7:19616915-19616704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 33
               

               Conread position:
               240-536
               

               Cow position:
               chr7:19096250-19095951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               70, 15
               

               Conread position:
               241-464
               

               Cow position:
               chr7:66748743-66748518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               241-528
               

               Cow position:
               chr7:25023676-25023391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               241-529
               

               Cow position:
               chr7:48443975-48443696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               241-533
               

               Cow position:
               chr7:50108503-50108205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 175
               

               Conread position:
               241-539
               

               Cow position:
               chr7:47046266-47046537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               241-540
               

               Cow position:
               chr7:64330939-64331251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               69, 26
               

               Conread position:
               241-558
               

               Cow position:
               chr7:6706078-6706400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 118
               

               Conread position:
               241-603
               

               Cow position:
               chr7:17713685-17713326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 69
               

               Conread position:
               241-603
               

               Cow position:
               chr7:36996159-36996504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 121
               

               Conread position:
               241-603
               

               Cow position:
               chr7:39415686-39416055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 191
               

               Conread position:
               242-597
               

               Cow position:
               chr7:3311627-3311978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               243-401
               

               Cow position:
               chr7:48012096-48012255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               243-403
               

               Cow position:
               chr7:27073096-27072932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               243-437
               

               Cow position:
               chr7:56838714-56838514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               243-571
               

               Cow position:
               chr7:64573277-64572943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 114
               

               Conread position:
               243-603
               

               Cow position:
               chr7:40263870-40263513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 199
               

               Conread position:
               245-563
               

               Cow position:
               chr7:16022087-16022400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 90
               

               Conread position:
               245-602
               

               Cow position:
               chr7:50095166-50095529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 175
               

               Conread position:
               246-387
               

               Cow position:
               chr7:49395771-49395627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               246-397
               

               Cow position:
               chr7:32221804-32221949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 89
               

               Conread position:
               246-412
               

               Cow position:
               chr7:56081317-56081476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               246-467
               

               Cow position:
               chr7:18858127-18858356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 208
               

               Conread position:
               246-489
               

               Cow position:
               chr7:62553229-62553472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               246-524
               

               Cow position:
               chr7:40305776-40305508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               7, 87
               

               Conread position:
               246-524
               

               Cow position:
               chr7:64102622-64102347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               64, 48
               

               Conread position:
               246-527
               

               Cow position:
               chr7:41445148-41445429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               246-535
               

               Cow position:
               chr7:34568986-34569262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               69, 153
               

               Conread position:
               246-537
               

               Cow position:
               chr7:21197593-21197305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               246-539
               

               Cow position:
               chr7:17406565-17406267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 90
               

               Conread position:
               246-539
               

               Cow position:
               chr7:51319586-51319877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               246-544
               

               Cow position:
               chr7:45748046-45747759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               246-550
               

               Cow position:
               chr7:1558522-1558826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 206
               

               Conread position:
               246-558
               

               Cow position:
               chr7:60547878-60547565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               65, 124
               

               Conread position:
               246-563
               

               Cow position:
               chr7:54513635-54513299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               246-565
               

               Cow position:
               chr7:53744116-53743793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               246-594
               

               Cow position:
               chr7:48406714-48406357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 210
               

               Conread position:
               246-597
               

               Cow position:
               chr7:20187-20548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               20, 211
               

               Conread position:
               246-603
               

               Cow position:
               chr7:3256557-3256200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               246-603
               

               Cow position:
               chr7:17967332-17966975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               64, 152
               

               Conread position:
               246-603
               

               Cow position:
               chr7:22793133-22793489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               246-603
               

               Cow position:
               chr7:23935902-23936256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               246-603
               

               Cow position:
               chr7:25867719-25867355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 287
               

               Conread position:
               246-603
               

               Cow position:
               chr7:33719839-33720179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               246-603
               

               Cow position:
               chr7:39451344-39451004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               246-603
               

               Cow position:
               chr7:40406448-40406794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               246-603
               

               Cow position:
               chr7:47697811-47698150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               246-603
               

               Cow position:
               chr7:63022926-63023286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 294
               

               Conread position:
               247-422
               

               Cow position:
               chr7:20827828-20827655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 90
               

               Conread position:
               247-461
               

               Cow position:
               chr7:57161936-57162155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               63, 205
               

               Conread position:
               247-500
               

               Cow position:
               chr7:58867397-58867663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               63, 214
               

               Conread position:
               247-516
               

               Cow position:
               chr7:24718747-24718476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               247-563
               

               Cow position:
               chr7:8776986-8777314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               63, 220
               

               Conread position:
               247-569
               

               Cow position:
               chr7:45955714-45956040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               247-601
               

               Cow position:
               chr7:20537150-20537510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               247-603
               

               Cow position:
               chr7:147198-147560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               247-603
               

               Cow position:
               chr7:25263154-25263513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               25, 210
               

               Conread position:
               248-397
               

               Cow position:
               chr7:48695584-48695742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               248-460
               

               Cow position:
               chr7:5913991-5914205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               62, 183
               

               Conread position:
               248-468
               

               Cow position:
               chr7:22729993-22730220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               90, 64
               

               Conread position:
               248-603
               

               Cow position:
               chr7:58863091-58862739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               249-403
               

               Cow position:
               chr7:46928770-46928935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               249-430
               

               Cow position:
               chr7:29346147-29345960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 87
               

               Conread position:
               249-506
               

               Cow position:
               chr7:7142278-7142013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 210
               

               Conread position:
               249-601
               

               Cow position:
               chr7:19230712-19230370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 18
               

               Conread position:
               249-603
               

               Cow position:
               chr7:38060644-38060281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 204
               

               Conread position:
               250-561
               

               Cow position:
               chr7:3026933-3026616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 208
               

               Conread position:
               250-601
               

               Cow position:
               chr7:17782882-17782549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 85
               

               Conread position:
               250-603
               

               Cow position:
               chr7:41315648-41315291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 173
               

               Conread position:
               251-565
               

               Cow position:
               chr7:66266795-66266473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 146
               

               Conread position:
               251-569
               

               Cow position:
               chr7:40303473-40303147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               5, 17
               

               Conread position:
               251-603
               

               Cow position:
               chr7:63946780-63946441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               252-582
               

               Cow position:
               chr7:25104157-25104495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               59, 15
               

               Conread position:
               253-603
               

               Cow position:
               chr7:50066319-50065970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 185
               

               Conread position:
               254-565
               

               Cow position:
               chr7:45709414-45709096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               254-601
               

               Cow position:
               chr7:9939-10292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               254-603
               

               Cow position:
               chr7:256013-255674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               254-603
               

               Cow position:
               chr7:39094120-39093781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               254, 52
               

               Conread position:
               255-470
               

               Cow position:
               chr7:68173358-68173142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               255-478
               

               Cow position:
               chr7:14712398-14712183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               255-603
               

               Cow position:
               chr7:26737544-26737201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               55, 82
               

               Conread position:
               255-603
               

               Cow position:
               chr7:44986453-44986798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               256-603
               

               Cow position:
               chr7:38696644-38696988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 163
               

               Conread position:
               258-563
               

               Cow position:
               chr7:23131395-23131703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 154
               

               Conread position:
               258-601
               

               Cow position:
               chr7:59075651-59075992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               258-603
               

               Cow position:
               chr7:1761517-1761876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 194
               

               Conread position:
               259-520
               

               Cow position:
               chr7:61765113-61765377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               259-544
               

               Cow position:
               chr7:41879703-41879406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               56, 65
               

               Conread position:
               259-564
               

               Cow position:
               chr7:43881877-43882187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 192
               

               Conread position:
               259-597
               

               Cow position:
               chr7:55694249-55693913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 110
               

               Conread position:
               260-461
               

               Cow position:
               chr7:37371814-37372007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               55, 7
               

               Conread position:
               260-569
               

               Cow position:
               chr7:25960272-25960577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               260-603
               

               Cow position:
               chr7:55688397-55688050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               49, 115
               

               Conread position:
               263-465
               

               Cow position:
               chr7:1489674-1489885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 196
               

               Conread position:
               263-603
               

               Cow position:
               chr7:4720431-4720086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               265-572
               

               Cow position:
               chr7:34084446-34084139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 200
               

               Conread position:
               266-564
               

               Cow position:
               chr7:13963009-13963317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               267-530
               

               Cow position:
               chr7:27551366-27551112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 58
               

               Conread position:
               267-597
               

               Cow position:
               chr7:52536443-52536114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 99
               

               Conread position:
               267-603
               

               Cow position:
               chr7:14029143-14029454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 145
               

               Conread position:
               267-603
               

               Cow position:
               chr7:64135657-64135322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               43, 94
               

               Conread position:
               268-534
               

               Cow position:
               chr7:6745009-6745290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               42, 93
               

               Conread position:
               268-603
               

               Cow position:
               chr7:14174601-14174281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               268-603
               

               Cow position:
               chr7:37697612-37697950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               269-587
               

               Cow position:
               chr7:51039241-51039560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               40, 55
               

               Conread position:
               269-603
               

               Cow position:
               chr7:48714657-48714999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               40, 186
               

               Conread position:
               269-603
               

               Cow position:
               chr7:50859818-50860152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 147
               

               Conread position:
               275-519
               

               Cow position:
               chr7:11715519-11715773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               34, 174
               

               Conread position:
               275-601
               

               Cow position:
               chr7:67872997-67873335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               40, 185
               

               Conread position:
               276-515
               

               Cow position:
               chr7:12202100-12201872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               277-558
               

               Cow position:
               chr7:25195352-25195642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               33, 182
               

               Conread position:
               279-447
               

               Cow position:
               chr7:32906151-32905971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               279-522
               

               Cow position:
               chr7:4840627-4840874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 177
               

               Conread position:
               281-424
               

               Cow position:
               chr7:35792938-35793083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               281-445
               

               Cow position:
               chr7:31700455-31700619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               281-459
               

               Cow position:
               chr7:6800734-6800546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               281-529
               

               Cow position:
               chr7:37777998-37777752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               282-561
               

               Cow position:
               chr7:43103633-43103330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               27, 180
               

               Conread position:
               282-571
               

               Cow position:
               chr7:3773448-3773153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               283-441
               

               Cow position:
               chr7:23057905-23057742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               285-524
               

               Cow position:
               chr7:39155398-39155649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               285-554
               

               Cow position:
               chr7:32372684-32372953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 166
               

               Conread position:
               285-563
               

               Cow position:
               chr7:20220014-20219734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               26, 127
               

               Conread position:
               285-563
               

               Cow position:
               chr7:56347991-56347719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               285-601
               

               Cow position:
               chr7:32079284-32079594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               286-558
               

               Cow position:
               chr7:39145926-39145645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 125
               

               Conread position:
               286-601
               

               Cow position:
               chr7:61790529-61790209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               290-564
               

               Cow position:
               chr7:43894654-43894935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 146
               

               Conread position:
               291-482
               

               Cow position:
               chr7:11422473-11422660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               19, 119
               
UCSC Genome Browser
               Conread position:
               292-603
               

               Cow position:
               chr7:33989793-33990097 (view  custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               18, 68
               
UCSC Genome Browser
               
               
               
Conread position: 293-558

               
               
               
Cow position: chr7:52680672-52680951 (view  custom track)

               
               
               
Alignm length: 283

               
               
               
Alignm identity: 190

               
               
               
Alignm E-value: 4e-21

               
               
               
Alignm gaps (pig, cow): 17, 32
UCSC Genome Browser
               
               
               
Conread position: 293-569

               
               
               
Cow position: chr7:53763751-53763482 (view  custom track)

               
               
               
Alignm length: 282

               
               
               
Alignm identity: 203

               
               
               
Alignm E-value: 2e-36

               
               
               
Alignm gaps (pig, cow): 16, 6

               
               
               Conread position:295-603
               
               
               Cow position:chr7:8977987-8977679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:219
               
               
               Alignm E-value:8e-38
               
               
               Alignm gaps (pig, cow):15, 160

               
               
               Conread position:296-516
               
               
               Cow position:chr7:44942294-44942510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):7, 36

               
               
               Conread position:296-549
               
               
               Cow position:chr7:22651990-22651736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):14, 161

               
               
               Conread position:296-563
               
               
               Cow position:chr7:1375983-1376240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:185
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):14, 40

               
               
               Conread position:296-603
               
               
               Cow position:chr7:29479358-29479672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:213
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):14, 159

               
               
               Conread position:297-603
               
               
               Cow position:chr7:37394154-37394443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):14, 111

               
               
               Conread position:297-603
               
               
               Cow position:chr7:46818660-46818350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:222
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):37, 136

               
               
               Conread position:298-529
               
               
               Cow position:chr7:1463720-1463942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):6, 63

               
               
               Conread position:298-570
               
               
               Cow position:chr7:46106048-46105770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:203
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):12, 35

               
               
               Conread position:298-601
               
               
               Cow position:chr7:21565712-21565421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:212
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):12, 42

               
               
               Conread position:299-603
               
               
               Cow position:chr7:9800192-9800500 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:234
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):11, 46

               
               
               Conread position:300-558
               
               
               Cow position:chr7:40051919-40051659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:198
               
               
               Alignm E-value:8e-38
               
               
               Alignm gaps (pig, cow):9, 140

               
               
               Conread position:300-603
               
               
               Cow position:chr7:4764681-4764990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:217
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):9, 128

               
               
               Conread position:303-504
               
               
               Cow position:chr7:5402071-5401858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):7, 101

               
               
               Conread position:303-601
               
               
               Cow position:chr7:46051498-46051798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:214
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):7, 131

               
               
               Conread position:306-460
               
               
               Cow position:chr7:27359627-27359473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):55, 89

               
               
               Conread position:306-563
               
               
               Cow position:chr7:9781878-9781618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):54, 19

               
               
               Conread position:306-601
               
               
               Cow position:chr7:18188374-18188086 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):5, 19

               
               
               Conread position:307-603
               
               
               Cow position:chr7:30816438-30816147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:212
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):53, 81

               
               
               Conread position:308-527
               
               
               Cow position:chr7:36714785-36714561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:166
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):34, 139

               
               
               Conread position:309-521
               
               
               Cow position:chr7:68932161-68932367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):149, 58

               
               
               Conread position:309-529
               
               
               Cow position:chr7:43055849-43055636 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):33, 48

               
               
               Conread position:310-563
               
               
               Cow position:chr7:57660311-57660059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:178
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):66, 44

               
               
               Conread position:314-523
               
               
               Cow position:chr7:22828563-22828350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):46, 147

               
               
               Conread position:314-565
               
               
               Cow position:chr7:48205241-48204992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):6, 90

               
               
               Conread position:315-563
               
               
               Cow position:chr7:42593417-42593172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):146, 27

               
               
               Conread position:316-561
               
               
               Cow position:chr7:68315104-68315340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:317-558
               
               
               Cow position:chr7:21166389-21166142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):43, 133

               
               
               Conread position:318-588
               
               
               Cow position:chr7:38263529-38263803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:185
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):42, 131

               
               
               Conread position:325-520
               
               
               Cow position:chr7:5300525-5300332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:148
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):35, 82

               
               
               Conread position:325-603
               
               
               Cow position:chr7:15559557-15559832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):18, 103

               
               
               Conread position:325-603
               
               
               Cow position:chr7:21122389-21122114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):66, 31

               
               
               Conread position:325-603
               
               
               Cow position:chr7:58923261-58923543 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:210
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):12, 128

               
               
               Conread position:326-550
               
               
               Cow position:chr7:8375140-8375359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:168
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):34, 89

               
               
               Conread position:328-502
               
               
               Cow position:chr7:35742537-35742360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):32, 123

               
               
               Conread position:328-590
               
               
               Cow position:chr7:23251688-23251435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:330-502
               
               
               Cow position:chr7:24564743-24564576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):32, 114

               
               
               Conread position:330-519
               
               
               Cow position:chr7:7553391-7553200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:135
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):27, 121

               
               
               Conread position:330-561
               
               
               Cow position:chr7:47937047-47936812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):27, 122

               
               
               Conread position:330-563
               
               
               Cow position:chr7:14481932-14482172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):13, 126

               
               
               Conread position:330-565
               
               
               Cow position:chr7:12755273-12755048 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):30, 63

               
               
               Conread position:330-598
               
               
               Cow position:chr7:8272530-8272802 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):17, 121

               
               
               Conread position:330-600
               
               
               Cow position:chr7:55085527-55085797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):30, 121

               
               
               Conread position:330-601
               
               
               Cow position:chr7:20918473-20918203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):148, 32

               
               
               Conread position:331-538
               
               
               Cow position:chr7:47172833-47172630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:154
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):30, 72

               
               
               Conread position:331-582
               
               
               Cow position:chr7:34214471-34214715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:189
               
               
               Alignm E-value:8.99999e-40
               
               
               Alignm gaps (pig, cow):192, 33

               
               
               Conread position:332-529
               
               
               Cow position:chr7:43411252-43411445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:144
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):28, 119

               
               
               Conread position:336-538
               
               
               Cow position:chr7:23641078-23640882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):24, 115

               
               
               Conread position:336-603
               
               
               Cow position:chr7:23636585-23636848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):24, 53

               
               
               Conread position:336-603
               
               
               Cow position:chr7:49903653-49903917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):24, 74

               
               
               Conread position:337-596
               
               
               Cow position:chr7:49417481-49417744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):12, 114

               
               
               Conread position:337-603
               
               
               Cow position:chr7:11958552-11958294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):23, 60

               
               
               Conread position:342-603
               
               
               Cow position:chr7:5853244-5853493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:343-530
               
               
               Cow position:chr7:41392859-41393044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):17, 49

               
               
               Conread position:343-601
               
               
               Cow position:chr7:58351073-58350823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:184
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):39, 12

               
               
               Conread position:343-602
               
               
               Cow position:chr7:5212594-5212333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:200
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):15, 106

               
               
               Conread position:343-603
               
               
               Cow position:chr7:7506251-7505981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:196
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):18, 109

               
               
               Conread position:343-603
               
               
               Cow position:chr7:14524364-14524624 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):17, 107

               
               
               Conread position:345-534
               
               
               Cow position:chr7:68909076-68909259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:147
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):45, 11

               
               
               Conread position:345-563
               
               
               Cow position:chr7:48638454-48638681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):15, 82

               
               
               Conread position:346-538
               
               
               Cow position:chr7:49783488-49783293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:146
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):14, 108

               
               
               Conread position:346-546
               
               
               Cow position:chr7:14353902-14353701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):15, 104

               
               
               Conread position:347-563
               
               
               Cow position:chr7:41745584-41745359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):38, 106

               
               
               Conread position:347-563
               
               
               Cow position:chr7:53579504-53579286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:160
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):9, 103

               
               
               Conread position:348-465
               
               
               Cow position:chr7:8809674-8809793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:97
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):7, 103

               
               
               Conread position:348-504
               
               
               Cow position:chr7:19846258-19846105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):12, 99

               
               
               Conread position:348-603
               
               
               Cow position:chr7:28544065-28544321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):12, 96

               
               
               Conread position:348-603
               
               
               Cow position:chr7:32945963-32946213 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):12, 63

               
               
               Conread position:349-527
               
               
               Cow position:chr7:31881844-31882019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):13, 40

               
               
               Conread position:349-558
               
               
               Cow position:chr7:40425424-40425212 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):38, 102

               
               
               Conread position:349-558
               
               
               Cow position:chr7:51638677-51638467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:162
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):11, 124

               
               
               Conread position:349-601
               
               
               Cow position:chr7:5199660-5199408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):11, 101

               
               
               Conread position:355-497
               
               
               Cow position:chr7:58296990-58296851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):134, 41

               
               
               Conread position:356-569
               
               
               Cow position:chr7:47830384-47830175 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:155
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):120, 54

               
               
               Conread position:356-569
               
               
               Cow position:chr7:61731990-61731781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:155
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):34, 91

               
               
               Conread position:359-545
               
               
               Cow position:chr7:58953581-58953762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):167, 29

               
               
               Conread position:359-563
               
               
               Cow position:chr7:32910447-32910644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):31, 70

               
               
               Conread position:360-561
               
               
               Cow position:chr7:51063193-51063392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):144, 88

               
               
               Conread position:360-601
               
               
               Cow position:chr7:1792558-1792305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):14, 83

               
               
               Conread position:365-533
               
               
               Cow position:chr7:27290624-27290454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):26, 127

               
               
               Conread position:365-603
               
               
               Cow position:chr7:50566291-50566056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):155, 83

               
               
               Conread position:370-563
               
               
               Cow position:chr7:61778758-61778956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):17, 79

               
               
               Conread position:370-587
               
               
               Cow position:chr7:69132865-69133079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):18, 79

               
               
               Conread position:370-603
               
               
               Cow position:chr7:21009025-21008789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):99, 43

               
               
               Conread position:372-504
               
               
               Cow position:chr7:23616052-23615927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:107
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):12, 77

               
               
               Conread position:372-603
               
               
               Cow position:chr7:8658429-8658660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):66, 76

               
               
               Conread position:373-603
               
               
               Cow position:chr7:52209134-52208901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:167
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):53, 32

               
               
               Conread position:375-569
               
               
               Cow position:chr7:60869866-60870052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):38, 75

               
               
               Conread position:376-603
               
               
               Cow position:chr7:18288354-18288125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:155
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):15, 78

               
               
               Conread position:376-603
               
               
               Cow position:chr7:50857868-50858098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:156
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):72, 112

               
               
               Conread position:377-601
               
               
               Cow position:chr7:53606401-53606190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:380-544
               
               
               Cow position:chr7:18253425-18253584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:124
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):159, 68

               
               
               Conread position:380-603
               
               
               Cow position:chr7:36774290-36774513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:168
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):97, 48

               
               
               Conread position:380-603
               
               
               Cow position:chr7:40308592-40308374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:162
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):146, 65

               
               
               Conread position:381-603
               
               
               Cow position:chr7:39823672-39823455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):79, 20

               
               
               Conread position:382-603
               
               
               Cow position:chr7:2816197-2816403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:159
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):53, 64

               
               
               Conread position:383-549
               
               
               Cow position:chr7:21522356-21522523 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:123
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):106, 80

               
               
               Conread position:383-587
               
               
               Cow position:chr7:24460885-24461080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):143, 50

               
               
               Conread position:383-602
               
               
               Cow position:chr7:30017590-30017374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):101, 33

               
               
               Conread position:384-600
               
               
               Cow position:chr7:63679005-63679214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:158
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:386-603
               
               
               Cow position:chr7:9161738-9161530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):145, 63

               
               
               Conread position:392-603
               
               
               Cow position:chr7:54054523-54054731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:152
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):97, 53

               
               
               Conread position:393-587
               
               
               Cow position:chr7:4811959-4812145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:145
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):133, 36

               
               
               Conread position:396-602
               
               
               Cow position:chr7:168729-168522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):60, 52

               
               
               Conread position:403-601
               
               
               Cow position:chr7:18947799-18947604 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):112, 42

               
               
               Conread position:404-603
               
               
               Cow position:chr7:38429764-38429566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):97, 44

               
               
               Conread position:411-587
               
               
               Cow position:chr7:39838925-39838754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):51, 38

               
               
               Conread position:425-601
               
               
               Cow position:chr7:8089129-8089308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):51, 24
Show alignments to all cow chromosomes.
Conread position:	1-603
Cow position:	chr7:32894718-32894103 (view UCSC Genome Browser custom track)
Alignm length:	623
Alignm identity:	435
Alignm E-value:	0
Alignm gaps (pig, cow):	59, 412
Conread position:	2-447
Cow position:	chr7:27136035-27136492 (view UCSC Genome Browser custom track)
Alignm length:	464
Alignm identity:	320
Alignm E-value:	0
Alignm gaps (pig, cow):	55, 91
Conread position:	2-532
Cow position:	chr7:24778575-24778048 (view UCSC Genome Browser custom track)
Alignm length:	545
Alignm identity:	410
Alignm E-value:	0
Alignm gaps (pig, cow):	62, 86
Conread position:	2-563
Cow position:	chr7:32277065-32277643 (view UCSC Genome Browser custom track)
Alignm length:	593
Alignm identity:	399
Alignm E-value:	0
Alignm gaps (pig, cow):	62, 296
Conread position:	2-564
Cow position:	chr7:62602733-62603283 (view UCSC Genome Browser custom track)
Alignm length:	577
Alignm identity:	430
Alignm E-value:	0
Alignm gaps (pig, cow):	62, 164
Conread position:	2-565
Cow position:	chr7:25703691-25703117 (view UCSC Genome Browser custom track)
Alignm length:	593
Alignm identity:	399
Alignm E-value:	0
Alignm gaps (pig, cow):	60, 181
Conread position:	2-566
Cow position:	chr7:12408721-12408132 (view UCSC Genome Browser custom track)
Alignm length:	600
Alignm identity:	427
Alignm E-value:	0
Alignm gaps (pig, cow):	62, 236
Conread position:	2-571
Cow position:	chr7:45927615-45927052 (view UCSC Genome Browser custom track)
Alignm length:	583
Alignm identity:	425
Alignm E-value:	0
Alignm gaps (pig, cow):	70, 191
Conread position:	2-602
Cow position:	chr7:8868366-8868971 (view UCSC Genome Browser custom track)
Alignm length:	621
Alignm identity:	437
Alignm E-value:	0
Alignm gaps (pig, cow):	57, 168
Conread position:	2-603
Cow position:	chr7:10122256-10122837 (view UCSC Genome Browser custom track)
Alignm length:	609
Alignm identity:	416
Alignm E-value:	0
Alignm gaps (pig, cow):	116, 41
Conread position:	3-386
Cow position:	chr7:13645825-13645425 (view UCSC Genome Browser custom track)
Alignm length:	401
Alignm identity:	301
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 0
Conread position:	3-394
Cow position:	chr7:17950415-17950796 (view UCSC Genome Browser custom track)
Alignm length:	404
Alignm identity:	279
Alignm E-value:	8e-39
Alignm gaps (pig, cow):	105, 34
Conread position:	3-397
Cow position:	chr7:35300989-35300607 (view UCSC Genome Browser custom track)
Alignm length:	403
Alignm identity:	289
Alignm E-value:	0
Alignm gaps (pig, cow):	83, 78
Conread position:	3-404
Cow position:	chr7:62544387-62543956 (view UCSC Genome Browser custom track)
Alignm length:	433
Alignm identity:	309
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 160
Conread position:	3-437
Cow position:	chr7:17269803-17269379 (view UCSC Genome Browser custom track)
Alignm length:	444
Alignm identity:	291
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	61, 81
Conread position:	3-439
Cow position:	chr7:20967981-20968417 (view UCSC Genome Browser custom track)
Alignm length:	448
Alignm identity:	325
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 107
Conread position:	3-444
Cow position:	chr7:68050650-68051089 (view UCSC Genome Browser custom track)
Alignm length:	455
Alignm identity:	323
Alignm E-value:	0
Alignm gaps (pig, cow):	57, 217
Conread position:	3-445
Cow position:	chr7:4139173-4138741 (view UCSC Genome Browser custom track)
Alignm length:	451
Alignm identity:	326
Alignm E-value:	0
Alignm gaps (pig, cow):	57, 71
Conread position:	3-446
Cow position:	chr7:12994696-12995150 (view UCSC Genome Browser custom track)
Alignm length:	464
Alignm identity:	346
Alignm E-value:	0
Alignm gaps (pig, cow):	58, 41
Conread position:	3-447
Cow position:	chr7:194140-193681 (view UCSC Genome Browser custom track)
Alignm length:	463
Alignm identity:	322
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 271