Cow genome map

Conread name: Mixc-0039,k14

Conread position: 1-416
Cow position: chr11:10294070-10294491 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 91

Conread position: 1-447
Cow position: chr11:17980881-17981345 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 243

Conread position: 1-565
Cow position: chr11:10094827-10095391 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 45

Conread position: 1-597
Cow position: chr11:18698317-18698959 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 492

Conread position: 1-603
Cow position: chr11:43361316-43360698 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 195

Conread position: 1-603
Cow position: chr11:48271673-48272286 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 163

Conread position: 2-385
Cow position: chr11:81337495-81337101 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 158

Conread position: 2-438
Cow position: chr11:84774586-84775028 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 278

Conread position: 2-451
Cow position: chr11:44579810-44579352 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 222

Conread position: 2-457
Cow position: chr11:40467647-40467178 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 170

Conread position: 2-527
Cow position: chr11:37068820-37068310 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 52

Conread position: 2-558
Cow position: chr11:29916023-29916582 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 210

Conread position: 2-581
Cow position: chr11:54856112-54856680 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 407

Conread position: 2-601
Cow position: chr11:20601737-20602310 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 64

Conread position: 2-603
Cow position: chr11:58399743-58400334 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 264

Conread position: 3-399
Cow position: chr11:29013856-29014280 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 290
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 144

Conread position: 3-416
Cow position: chr11:16795672-16795252 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 233

Conread position: 3-416
Cow position: chr11:55116949-55117382 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 228

Conread position: 3-422
Cow position: chr11:50236493-50236059 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 3-424
Cow position: chr11:54134773-54134342 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 26

Conread position: 3-428
Cow position: chr11:22103238-22103668 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 276

Conread position: 3-440
Cow position: chr11:21894663-21894228 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 52

Conread position: 3-441
Cow position: chr11:48428564-48429004 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 155

Conread position: 3-442
Cow position: chr11:79020057-79019597 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 165

Conread position: 3-446
Cow position: chr11:1625741-1625294 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 129

Conread position: 3-447
Cow position: chr11:10302729-10302259 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 183

Conread position: 3-456
Cow position: chr11:84891290-84890811 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 260

Conread position: 3-460
Cow position: chr11:10991741-10992224 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 472

Conread position: 3-461
Cow position: chr11:25336558-25337020 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 72

Conread position: 3-461
Cow position: chr11:41599268-41598782 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 475

Conread position: 3-467
Cow position: chr11:18509533-18509067 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 311

Conread position: 3-471
Cow position: chr11:67951473-67951011 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 138

Conread position: 3-472
Cow position: chr11:27462932-27462436 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 363

Conread position: 3-472
Cow position: chr11:66897322-66896842 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 163

Conread position: 3-487
Cow position: chr11:19890360-19890832 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 204

Conread position: 3-498
Cow position: chr11:31884989-31885500 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 38

Conread position: 3-502
Cow position: chr11:8233092-8232585 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 76

Conread position: 3-503
Cow position: chr11:21819980-21819458 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 140

Conread position: 3-529
Cow position: chr11:18389396-18388864 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 136

Conread position: 3-529
Cow position: chr11:58973363-58972832 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 330

Conread position: 3-531
Cow position: chr11:42793483-42792963 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 149

Conread position: 3-533
Cow position: chr11:17113151-17112617 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 340

Conread position: 3-534
Cow position: chr11:42232072-42232621 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 329

Conread position: 3-537
Cow position: chr11:2309345-2309889 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 269

Conread position: 3-537
Cow position: chr11:59366609-59366059 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 343

Conread position: 3-539
Cow position: chr11:21798425-21798951 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 96

Conread position: 3-543
Cow position: chr11:68571196-68570646 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 322

Conread position: 3-549
Cow position: chr11:6153894-6154440 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 3-549
Cow position: chr11:10076250-10076800 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 326

Conread position: 3-550
Cow position: chr11:17890247-17889698 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 271

Conread position: 3-555
Cow position: chr11:67746762-67747322 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 29

Conread position: 3-558
Cow position: chr11:44818584-44819134 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 238

Conread position: 3-558
Cow position: chr11:77759274-77758720 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 72

Conread position: 3-563
Cow position: chr11:4731815-4732389 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 149

Conread position: 3-563
Cow position: chr11:77745787-77745205 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 5

Conread position: 3-564
Cow position: chr11:30164975-30165556 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 152

Conread position: 3-564
Cow position: chr11:39114977-39115541 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 160

Conread position: 3-565
Cow position: chr11:77767132-77766547 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 126

Conread position: 3-571
Cow position: chr11:30707974-30708562 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 62

Conread position: 3-571
Cow position: chr11:62881174-62880578 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 329

Conread position: 3-573
Cow position: chr11:8841273-8840692 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 432

Conread position: 3-580
Cow position: chr11:42358606-42359177 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 61

Conread position: 3-601
Cow position: chr11:18086866-18086264 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Conread position: 3-601
Cow position: chr11:38638596-38639195 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 242

Conread position: 3-601
Cow position: chr11:40458598-40459191 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 211

Conread position: 3-601
Cow position: chr11:50072460-50073021 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 49

Conread position: 3-601
Cow position: chr11:63847338-63847930 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 116

Conread position: 3-603
Cow position: chr11:259706-259086 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 145

Conread position: 3-603
Cow position: chr11:3393734-3393124 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 153

Conread position: 3-603
Cow position: chr11:4206771-4207396 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 89

Conread position: 3-603
Cow position: chr11:7873636-7874223 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 322

Conread position: 3-603
Cow position: chr11:17279172-17278590 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 96

Conread position: 3-603
Cow position: chr11:17321145-17321736 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 85

Conread position: 3-603
Cow position: chr11:17831757-17831136 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 224

Conread position: 3-603
Cow position: chr11:23129070-23128454 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 73

Conread position: 3-603
Cow position: chr11:25386547-25387154 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 312

Conread position: 3-603
Cow position: chr11:34112724-34113351 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 340

Conread position: 3-603
Cow position: chr11:35362975-35363567 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 10

Conread position: 3-603
Cow position: chr11:36986442-36987035 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 205

Conread position: 3-603
Cow position: chr11:44036192-44036805 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 136

Conread position: 3-603
Cow position: chr11:44233852-44234441 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 71

Conread position: 3-603
Cow position: chr11:50153338-50152728 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 92

Conread position: 3-603
Cow position: chr11:52297737-52297135 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 67

Conread position: 3-603
Cow position: chr11:59701960-59702576 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 271

Conread position: 3-603
Cow position: chr11:61455061-61454431 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 458

Conread position: 3-603
Cow position: chr11:74316175-74316794 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 61

Conread position: 3-603
Cow position: chr11:76114129-76114728 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 149

Conread position: 3-603
Cow position: chr11:77705244-77705836 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 68

Conread position: 4-385
Cow position: chr11:697700-697298 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 180

Conread position: 4-447
Cow position: chr11:19787626-19788065 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 155

Conread position: 4-472
Cow position: chr11:41577529-41577059 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 271

Conread position: 4-491
Cow position: chr11:15125473-15125004 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 318
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 61

Conread position: 4-502
Cow position: chr11:33363818-33364325 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 341
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 269

Conread position: 4-528
Cow position: chr11:64334333-64334857 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 349

Conread position: 4-550
Cow position: chr11:75480558-75479989 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 164

Conread position: 4-557
Cow position: chr11:33413719-33414276 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 105

Conread position: 4-558
Cow position: chr11:4060550-4060019 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 122

Conread position: 4-558
Cow position: chr11:33350223-33349660 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 148

Conread position: 4-565
Cow position: chr11:63507915-63508462 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 36

Conread position: 4-569
Cow position: chr11:65409666-65409102 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 69

Conread position: 4-572
Cow position: chr11:38794018-38794594 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 398
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 75

Conread position: 4-600
Cow position: chr11:951749-952351 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 154

Conread position: 4-603
Cow position: chr11:10214073-10213483 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 102

Conread position: 4-603
Cow position: chr11:13061736-13061149 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 72

Conread position: 5-439
Cow position: chr11:85189901-85189459 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 297
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 15

Conread position: 5-477
Cow position: chr11:74929255-74929744 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 272

Conread position: 5-564
Cow position: chr11:26067702-26067136 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 352

Conread position: 5-603
Cow position: chr11:23138595-23137968 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 149

Conread position: 6-395
Cow position: chr11:49550600-49550199 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 30, 240

Conread position: 6-563
Cow position: chr11:42017146-42016593 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 6-603
Cow position: chr11:67246285-67246871 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 80

Conread position: 7-456
Cow position: chr11:78819583-78820036 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 334

Conread position: 7-459
Cow position: chr11:34412580-34413040 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 25

Conread position: 7-603
Cow position: chr11:7589676-7590274 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 24

Conread position: 7-603
Cow position: chr11:13499500-13500101 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 93

Conread position: 7-603
Cow position: chr11:30191641-30192264 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 465

Conread position: 7-603
Cow position: chr11:64043729-64044319 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 210

Conread position: 8-538
Cow position: chr11:1486388-1485858 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 454

Conread position: 9-603
Cow position: chr11:48649430-48650058 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 89

Conread position: 10-472
Cow position: chr11:48901593-48901125 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 237

Conread position: 10-571
Cow position: chr11:42292352-42291785 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 225

Conread position: 12-558
Cow position: chr11:8495528-8496073 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 64

Conread position: 12-564
Cow position: chr11:63157424-63156870 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 175

Conread position: 16-565
Cow position: chr11:47169505-47168969 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 368
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 27

Conread position: 17-456
Cow position: chr11:58614139-58614601 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 38

Conread position: 17-532
Cow position: chr11:17969086-17968570 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 402

Conread position: 18-529
Cow position: chr11:70746035-70745528 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 57

Conread position: 20-537
Cow position: chr11:16251762-16251224 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 20-566
Cow position: chr11:59902390-59902940 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 174

Conread position: 20-603
Cow position: chr11:35579748-35580346 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 220

Conread position: 24-558
Cow position: chr11:32749595-32750151 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 448

Conread position: 24-565
Cow position: chr11:35881400-35881958 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 149

Conread position: 30-364
Cow position: chr11:64352221-64351872 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 29, 180

Conread position: 30-537
Cow position: chr11:81067079-81066563 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 320

Conread position: 30-572
Cow position: chr11:53314062-53313518 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 126

Conread position: 30-603
Cow position: chr11:26535261-26535872 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 261

Conread position: 34-550
Cow position: chr11:8339898-8339373 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 392

Conread position: 34-565
Cow position: chr11:77751261-77750723 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 249

Conread position: 34-569
Cow position: chr11:33754419-33753857 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 38

Conread position: 34-603
Cow position: chr11:29947425-29946828 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 65

Conread position: 36-559
Cow position: chr11:22932466-22931929 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 117

Conread position: 36-563
Cow position: chr11:76370010-76369476 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 193

Conread position: 37-523
Cow position: chr11:62978987-62979493 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 213

Conread position: 37-565
Cow position: chr11:65987724-65988272 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 367
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 253

Conread position: 38-545
Cow position: chr11:32198454-32198960 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 39-564
Cow position: chr11:67931964-67931446 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 148

Conread position: 40-565
Cow position: chr11:33294276-33293731 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 139

Conread position: 43-447
Cow position: chr11:51207944-51208348 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 121

Conread position: 43-603
Cow position: chr11:8525586-8525029 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 109

Conread position: 45-441
Cow position: chr11:37117993-37118414 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 270

Conread position: 57-595
Cow position: chr11:21852748-21852224 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 58-529
Cow position: chr11:18067313-18066819 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 39

Conread position: 58-595
Cow position: chr11:58587868-58588422 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 390

Conread position: 58-603
Cow position: chr11:27248027-27248576 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 91

Conread position: 59-603
Cow position: chr11:40819110-40818541 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 78

Conread position: 60-600
Cow position: chr11:64638978-64638443 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 83

Conread position: 62-550
Cow position: chr11:65430610-65431087 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 84

Conread position: 66-490
Cow position: chr11:31900590-31901019 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 342

Conread position: 73-597
Cow position: chr11:43430911-43430377 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 265

Conread position: 80-504
Cow position: chr11:49105615-49106041 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 57

Conread position: 84-416
Cow position: chr11:81931510-81931184 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 84-601
Cow position: chr11:53778176-53778700 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 139

Conread position: 84-603
Cow position: chr11:40742-41265 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 212

Conread position: 85-395
Cow position: chr11:78705234-78705562 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 94

Conread position: 85-453
Cow position: chr11:25744883-25745258 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 148

Conread position: 85-523
Cow position: chr11:41239711-41239266 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 194

Conread position: 85-563
Cow position: chr11:80788351-80787860 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 263

Conread position: 85-603
Cow position: chr11:42083038-42083554 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 192

Conread position: 85-603
Cow position: chr11:69118859-69119379 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 339

Conread position: 86-472
Cow position: chr11:65495768-65495371 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 255

Conread position: 86-563
Cow position: chr11:48672271-48672759 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 51

Conread position: 88-603
Cow position: chr11:44637197-44636668 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 242

Conread position: 89-460
Cow position: chr11:62750185-62749812 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 182

Conread position: 90-561
Cow position: chr11:84386067-84385595 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 90-563
Cow position: chr11:26483302-26483758 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 92-603
Cow position: chr11:49152516-49153034 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 20

Conread position: 93-461
Cow position: chr11:30701289-30701666 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 209

Conread position: 95-588
Cow position: chr11:46746208-46746704 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 96-451
Cow position: chr11:11534325-11533973 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 64

Conread position: 96-477
Cow position: chr11:43524195-43524579 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 53

Conread position: 96-597
Cow position: chr11:61427188-61427672 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 173

Conread position: 97-489
Cow position: chr11:53859858-53860265 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 371

Conread position: 103-476
Cow position: chr11:58459718-58460072 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 5

Conread position: 106-439
Cow position: chr11:4412436-4412092 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 106-522
Cow position: chr11:85764543-85764937 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 106

Conread position: 106-601
Cow position: chr11:43897719-43898222 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 311

Conread position: 107-603
Cow position: chr11:59872511-59873014 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 162

Conread position: 108-505
Cow position: chr11:64932703-64932308 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 33

Conread position: 108-529
Cow position: chr11:17860568-17860147 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 343

Conread position: 113-519
Cow position: chr11:77240952-77241369 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 266

Conread position: 113-527
Cow position: chr11:70838706-70838277 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 44

Conread position: 113-529
Cow position: chr11:83196092-83196506 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 130

Conread position: 113-603
Cow position: chr11:53147949-53147446 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 156

Conread position: 113-603
Cow position: chr11:55744064-55744553 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 310

Conread position: 114-550
Cow position: chr11:23252011-23251561 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 20

Conread position: 115-444
Cow position: chr11:3303429-3303759 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 285

Conread position: 115-564
Cow position: chr11:11752922-11752469 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 121

Conread position: 115-565
Cow position: chr11:46413163-46413621 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 164

Conread position: 116-455
Cow position: chr11:3769692-3769352 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 18

Conread position: 116-577
Cow position: chr11:1849569-1849111 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 105

Conread position: 117-524
Cow position: chr11:71846754-71846346 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 340

Conread position: 117-529
Cow position: chr11:7334120-7333711 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 20

Conread position: 117-550
Cow position: chr11:27386745-27386306 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 97

Conread position: 118-392
Cow position: chr11:49873019-49873303 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 129

Conread position: 118-565
Cow position: chr11:6835140-6835581 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 81

Conread position: 121-603
Cow position: chr11:80820400-80819919 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 246

Conread position: 122-529
Cow position: chr11:24967066-24967462 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 122-569
Cow position: chr11:47566354-47565886 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 344

Conread position: 123-529
Cow position: chr11:40486321-40485926 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 103

Conread position: 125-603
Cow position: chr11:30639329-30638864 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 127-529
Cow position: chr11:16233307-16232928 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 284
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 55, 87

Conread position: 127-539
Cow position: chr11:81174495-81174906 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 142

Conread position: 128-550
Cow position: chr11:18371824-18371406 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 287
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 102

Conread position: 128-561
Cow position: chr11:15503708-15504156 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 128-603
Cow position: chr11:8428089-8428597 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 354

Conread position: 129-519
Cow position: chr11:81605244-81605627 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 147

Conread position: 129-538
Cow position: chr11:44642674-44642264 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 91

Conread position: 130-456
Cow position: chr11:55347873-55348206 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 105

Conread position: 130-603
Cow position: chr11:80923727-80923238 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 131-603
Cow position: chr11:3833739-3833278 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 207

Conread position: 134-587
Cow position: chr11:30879289-30879737 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 296

Conread position: 135-603
Cow position: chr11:34467223-34467652 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 13

Conread position: 136-407
Cow position: chr11:46591945-46592212 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 106, 14

Conread position: 136-463
Cow position: chr11:61137584-61137254 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 190

Conread position: 136-601
Cow position: chr11:31352957-31352468 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 140

Conread position: 138-519
Cow position: chr11:47586731-47586351 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 71

Conread position: 138-558
Cow position: chr11:5032161-5031735 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 136

Conread position: 140-564
Cow position: chr11:51044314-51043886 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 59

Conread position: 141-603
Cow position: chr11:28643706-28644173 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 48

Conread position: 143-603
Cow position: chr11:68207226-68206756 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 7

Conread position: 149-555
Cow position: chr11:62490061-62490476 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 29

Conread position: 149-587
Cow position: chr11:2091974-2092404 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 140

Conread position: 150-447
Cow position: chr11:33256092-33255787 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 21

Conread position: 150-476
Cow position: chr11:986574-986891 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 49

Conread position: 150-601
Cow position: chr11:30354690-30355142 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 124

Conread position: 151-569
Cow position: chr11:70484234-70483800 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 307

Conread position: 157-461
Cow position: chr11:73478258-73478563 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 25, 118

Conread position: 159-603
Cow position: chr11:35874337-35873917 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 72

Conread position: 160-565
Cow position: chr11:38235875-38236300 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 209

Conread position: 162-529
Cow position: chr11:53130455-53130822 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 73

Conread position: 163-571
Cow position: chr11:30924786-30925210 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 308
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 47

Conread position: 164-464
Cow position: chr11:34615910-34616216 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 279

Conread position: 164-601
Cow position: chr11:35684857-35684417 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 167-571
Cow position: chr11:54333977-54334382 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 209

Conread position: 167-601
Cow position: chr11:64090441-64090013 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 72

Conread position: 168-439
Cow position: chr11:82232069-82232338 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 15, 76

Conread position: 171-586
Cow position: chr11:30121013-30120593 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 7

Conread position: 175-515
Cow position: chr11:81614976-81614645 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 61

Conread position: 175-519
Cow position: chr11:47165481-47165142 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 60

Conread position: 178-472
Cow position: chr11:9253372-9253063 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 280

Conread position: 179-416
Cow position: chr11:23572411-23572167 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 63, 41

Conread position: 179-603
Cow position: chr11:70609447-70609883 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 180-601
Cow position: chr11:56518651-56518228 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 58

Conread position: 182-597
Cow position: chr11:39499038-39499436 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 8

Conread position: 182-603
Cow position: chr11:41809816-41809407 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 86

Conread position: 183-543
Cow position: chr11:955026-955390 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 59, 147

Conread position: 183-565
Cow position: chr11:53452679-53452301 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 15

Conread position: 183-571
Cow position: chr11:22978201-22977820 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 91

Conread position: 183-589
Cow position: chr11:28692088-28691684 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 278
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 35

Conread position: 184-534
Cow position: chr11:59156212-59155863 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 88

Conread position: 185-432
Cow position: chr11:58600527-58600780 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 91, 48

Conread position: 185-566
Cow position: chr11:42836296-42835901 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 278
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 43

Conread position: 186-563
Cow position: chr11:4435985-4436366 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 184

Conread position: 189-441
Cow position: chr11:86926254-86926002 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 76

Conread position: 190-601
Cow position: chr11:73924890-73924478 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 218

Conread position: 194-502
Cow position: chr11:43913895-43914197 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 86

Conread position: 196-426
Cow position: chr11:51755990-51756228 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 46, 81

Conread position: 196-603
Cow position: chr11:30934094-30934502 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 107

Conread position: 196-603
Cow position: chr11:53552934-53553301 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 114, 34

Conread position: 198-601
Cow position: chr11:68910176-68909772 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 26

Conread position: 201-476
Cow position: chr11:46002002-46001713 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 259

Conread position: 203-527
Cow position: chr11:9837419-9837092 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 138

Conread position: 206-477
Cow position: chr11:73474092-73473807 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 86

Conread position: 206-528
Cow position: chr11:60302273-60301953 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 221

Conread position: 206-561
Cow position: chr11:16226390-16226744 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 243

Conread position: 209-464
Cow position: chr11:35238516-35238781 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 248

Conread position: 209-563
Cow position: chr11:52133136-52132775 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 71

Conread position: 209-601
Cow position: chr11:66425186-66424796 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 66

Conread position: 209-603
Cow position: chr11:34962750-34963155 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 210-452
Cow position: chr11:7315436-7315192 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 16

Conread position: 210-550
Cow position: chr11:39118477-39118788 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 53

Conread position: 210-603
Cow position: chr11:41986355-41985960 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 141

Conread position: 211-603
Cow position: chr11:23232823-23232434 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 150

Conread position: 214-528
Cow position: chr11:32609687-32610006 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 20

Conread position: 214-603
Cow position: chr11:36182381-36182780 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 240

Conread position: 215-563
Cow position: chr11:70272997-70273353 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 27

Conread position: 218-423
Cow position: chr11:6620595-6620378 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 218-508
Cow position: chr11:25319747-25320044 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 238

Conread position: 218-603
Cow position: chr11:1071397-1071005 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 176

Conread position: 219-464
Cow position: chr11:50111889-50112136 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 142

Conread position: 220-445
Cow position: chr11:65159741-65159520 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 17

Conread position: 221-558
Cow position: chr11:78381345-78381024 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 9, 25

Conread position: 222-476
Cow position: chr11:53719648-53719901 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 20

Conread position: 222-511
Cow position: chr11:65857558-65857853 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 231

Conread position: 222-565
Cow position: chr11:45872612-45872263 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 88, 28

Conread position: 223-561
Cow position: chr11:85723403-85723741 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 219

Conread position: 224-565
Cow position: chr11:87155215-87155567 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 80

Conread position: 225-423
Cow position: chr11:6639215-6639416 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 48

Conread position: 225-442
Cow position: chr11:62016567-62016350 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 44

Conread position: 226-563
Cow position: chr11:3719956-3720300 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 16, 175

Conread position: 226-603
Cow position: chr11:33348480-33348102 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 9

Conread position: 227-555
Cow position: chr11:30952814-30952479 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 192

Conread position: 227-601
Cow position: chr11:18572509-18572884 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 135

Conread position: 227-603
Cow position: chr11:65827027-65826665 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 15, 7

Conread position: 229-402
Cow position: chr11:75510522-75510345 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 6

Conread position: 229-456
Cow position: chr11:87169904-87169672 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 54

Conread position: 229-501
Cow position: chr11:13190927-13191206 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 13, 54

Conread position: 230-565
Cow position: chr11:56892529-56892865 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 5

Conread position: 230-581
Cow position: chr11:70459283-70459629 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 128

Conread position: 232-558
Cow position: chr11:36981278-36981604 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 112

Conread position: 233-478
Cow position: chr11:36496567-36496802 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 19

Conread position: 234-519
Cow position: chr11:41983732-41983458 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 8, 13

Conread position: 234-529
Cow position: chr11:48932870-48932578 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 234-587
Cow position: chr11:41271849-41272207 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 177

Conread position: 234-601
Cow position: chr11:56654263-56654639 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 8

Conread position: 234-603
Cow position: chr11:20761560-20761928 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 234-603
Cow position: chr11:49148762-49149135 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 39

Conread position: 234-603
Cow position: chr11:62225712-62226072 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 92

Conread position: 236-477
Cow position: chr11:81300898-81300650 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 164

Conread position: 237-409
Cow position: chr11:9234344-9234523 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 23

Conread position: 237-456
Cow position: chr11:70399576-70399799 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 31

Conread position: 239-457
Cow position: chr11:39057357-39057568 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 71, 104

Conread position: 239-563
Cow position: chr11:31525586-31525925 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 81, 16

Conread position: 239-589
Cow position: chr11:45898338-45897978 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 58

Conread position: 240-603
Cow position: chr11:52381152-52380786 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 210

Conread position: 241-456
Cow position: chr11:71309808-71309589 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 69, 192

Conread position: 241-464
Cow position: chr11:7248156-7247935 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 116

Conread position: 241-464
Cow position: chr11:70303807-70304030 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 17

Conread position: 241-467
Cow position: chr11:57111587-57111357 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 69, 26

Conread position: 241-472
Cow position: chr11:37347196-37347435 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 94, 19

Conread position: 241-497
Cow position: chr11:75355330-75355587 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 59, 201

Conread position: 241-529
Cow position: chr11:77682900-77683178 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 32

Conread position: 241-550
Cow position: chr11:62155351-62155671 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 33

Conread position: 241-552
Cow position: chr11:18210628-18210313 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 69, 211

Conread position: 241-561
Cow position: chr11:2788100-2788437 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 69, 264

Conread position: 241-563
Cow position: chr11:6234158-6233833 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 69, 96

Conread position: 241-565
Cow position: chr11:50951271-50951605 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 68, 213

Conread position: 241-603
Cow position: chr11:8988509-8988146 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 155

Conread position: 241-603
Cow position: chr11:17083577-17083224 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 68, 165

Conread position: 241-603
Cow position: chr11:45632044-45631680 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 214

Conread position: 241-603
Cow position: chr11:60470459-60470113 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 69, 84

Conread position: 242-511
Cow position: chr11:59370736-59371006 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 142

Conread position: 242-528
Cow position: chr11:17192560-17192271 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 208

Conread position: 243-446
Cow position: chr11:2281564-2281361 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 30

Conread position: 243-563
Cow position: chr11:20491296-20491615 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 31

Conread position: 243-570
Cow position: chr11:67804475-67804802 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 24

Conread position: 243-601
Cow position: chr11:83230662-83230317 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 31

Conread position: 243-603
Cow position: chr11:13043414-13043060 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 19

Conread position: 243-603
Cow position: chr11:30475722-30476084 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 24

Conread position: 245-447
Cow position: chr11:10127889-10127693 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 34

Conread position: 245-519
Cow position: chr11:62045123-62045395 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 61, 114

Conread position: 245-543
Cow position: chr11:62738940-62739244 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 70, 160

Conread position: 245-563
Cow position: chr11:79728949-79728621 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 212

Conread position: 245-569
Cow position: chr11:43646693-43646360 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 58

Conread position: 246-382
Cow position: chr11:57481139-57481002 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 21

Conread position: 246-397
Cow position: chr11:57499088-57498928 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 124

Conread position: 246-402
Cow position: chr11:6091923-6091773 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 79

Conread position: 246-420
Cow position: chr11:3282784-3282955 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 41

Conread position: 246-446
Cow position: chr11:48232468-48232663 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 79

Conread position: 246-467
Cow position: chr11:19508022-19508245 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 88

Conread position: 246-481
Cow position: chr11:51688000-51687761 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 204

Conread position: 246-504
Cow position: chr11:1668400-1668663 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 167

Conread position: 246-508
Cow position: chr11:71455513-71455780 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 209

Conread position: 246-521
Cow position: chr11:30110697-30110963 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 21

Conread position: 246-529
Cow position: chr11:18244216-18243932 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 210

Conread position: 246-536
Cow position: chr11:18484434-18484159 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 64, 97

Conread position: 246-556
Cow position: chr11:15632830-15632515 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 28

Conread position: 246-564
Cow position: chr11:10620600-10620281 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 65, 185

Conread position: 246-565
Cow position: chr11:12950216-12949899 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 21

Conread position: 246-565
Cow position: chr11:21549221-21549528 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 64, 90

Conread position: 246-565
Cow position: chr11:30720823-30721146 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 64, 181

Conread position: 246-567
Cow position: chr11:42003228-42002897 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 63, 18

Conread position: 246-601
Cow position: chr11:12111742-12111375 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 148

Conread position: 246-601
Cow position: chr11:45646865-45646510 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 27

Conread position: 246-601
Cow position: chr11:55761605-55761952 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 21

Conread position: 246-603
Cow position: chr11:377925-377556 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 210

Conread position: 246-603
Cow position: chr11:1362755-1362382 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 208

Conread position: 246-603
Cow position: chr11:17227914-17227559 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 85

Conread position: 246-603
Cow position: chr11:21844407-21844053 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 27

Conread position: 246-603
Cow position: chr11:34830054-34829700 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 132

Conread position: 246-603
Cow position: chr11:48474434-48474789 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 95

Conread position: 246-603
Cow position: chr11:58103049-58102676 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 64, 175

Conread position: 246-603
Cow position: chr11:73354330-73353974 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 210

Conread position: 246-603
Cow position: chr11:83043635-83043277 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 63, 97

Conread position: 247-440
Cow position: chr11:38010085-38009887 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 100

Conread position: 247-472
Cow position: chr11:25165172-25165397 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 27

Conread position: 247-504
Cow position: chr11:35148895-35149145 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 63, 32

Conread position: 247-519
Cow position: chr11:8105509-8105784 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 203

Conread position: 247-519
Cow position: chr11:62965827-62965549 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 63, 114

Conread position: 247-537
Cow position: chr11:38193878-38194173 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 206

Conread position: 247-548
Cow position: chr11:77207775-77208071 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 161

Conread position: 247-558
Cow position: chr11:48697174-48697485 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 185

Conread position: 247-562
Cow position: chr11:30912265-30911957 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 20

Conread position: 247-565
Cow position: chr11:16000655-16000973 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 79, 13

Conread position: 247-565
Cow position: chr11:53773399-53773729 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 63, 207

Conread position: 247-566
Cow position: chr11:32377914-32378237 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 205

Conread position: 247-569
Cow position: chr11:46580093-46580410 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 63, 87

Conread position: 247-597
Cow position: chr11:51144444-51144793 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 162

Conread position: 247-601
Cow position: chr11:11125389-11125747 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 205

Conread position: 247-601
Cow position: chr11:11232728-11232372 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 80

Conread position: 247-603
Cow position: chr11:67600494-67600870 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 220

Conread position: 247-603
Cow position: chr11:80530097-80530444 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 93

Conread position: 248-465
Cow position: chr11:12555690-12555463 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 25

Conread position: 248-505
Cow position: chr11:6580541-6580803 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 205

Conread position: 248-565
Cow position: chr11:5790188-5789852 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 230

Conread position: 248-603
Cow position: chr11:49935015-49934645 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 210

Conread position: 248-603
Cow position: chr11:83066223-83066573 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 112

Conread position: 249-501
Cow position: chr11:81143830-81143571 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 212

Conread position: 249-504
Cow position: chr11:75748164-75748418 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 18

Conread position: 249-557
Cow position: chr11:9088566-9088258 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 68

Conread position: 249-601
Cow position: chr11:66041002-66041361 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 61, 202

Conread position: 249-603
Cow position: chr11:50778098-50778453 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 207

Conread position: 249-603
Cow position: chr11:62663504-62663149 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 215

Conread position: 250-412
Cow position: chr11:7415116-7414953 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 17

Conread position: 250-563
Cow position: chr11:19247466-19247153 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 124

Conread position: 250-571
Cow position: chr11:40258668-40258358 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 17

Conread position: 250-603
Cow position: chr11:9221996-9221646 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 158

Conread position: 250-603
Cow position: chr11:44222630-44222971 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 17

Conread position: 251-557
Cow position: chr11:55333639-55333949 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 204

Conread position: 252-404
Cow position: chr11:64405600-64405446 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 22

Conread position: 252-563
Cow position: chr11:34032464-34032156 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 14

Conread position: 252-601
Cow position: chr11:8148152-8147815 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 58, 21

Conread position: 252-601
Cow position: chr11:63482694-63482347 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 200

Conread position: 252-603
Cow position: chr11:55052604-55052957 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 171

Conread position: 255-416
Cow position: chr11:15608558-15608391 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 12

Conread position: 255-564
Cow position: chr11:32439214-32438903 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 74, 57

Conread position: 255-569
Cow position: chr11:16262297-16261973 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 17

Conread position: 255-602
Cow position: chr11:24601704-24602055 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 199

Conread position: 256-461
Cow position: chr11:70617581-70617793 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 113

Conread position: 256-461
Cow position: chr11:84924360-84924151 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 17

Conread position: 256-583
Cow position: chr11:24584915-24585245 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 67

Conread position: 256-602
Cow position: chr11:47544863-47545216 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 256-603
Cow position: chr11:27746653-27747009 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 202

Conread position: 257-603
Cow position: chr11:22499614-22499281 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 19

Conread position: 258-563
Cow position: chr11:30764217-30764537 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 200

Conread position: 258-603
Cow position: chr11:70836630-70836291 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 73

Conread position: 259-458
Cow position: chr11:80824907-80825104 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 8

Conread position: 259-561
Cow position: chr11:83397643-83397949 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 64

Conread position: 259-579
Cow position: chr11:30596735-30597056 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 83

Conread position: 259-602
Cow position: chr11:15772981-15772629 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 51, 19

Conread position: 260-460
Cow position: chr11:10876977-10877183 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 64

Conread position: 260-528
Cow position: chr11:171957-171693 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 136

Conread position: 260-603
Cow position: chr11:2917837-2917501 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 49, 13

Conread position: 261-519
Cow position: chr11:63516563-63516826 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 234

Conread position: 262-468
Cow position: chr11:41426655-41426863 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 183

Conread position: 262-563
Cow position: chr11:56728688-56728996 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 48, 138

Conread position: 262-603
Cow position: chr11:36647102-36647429 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 48, 163

Conread position: 263-524
Cow position: chr11:2050322-2050583 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 173

Conread position: 263-601
Cow position: chr11:77128411-77128744 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 68

Conread position: 264-555
Cow position: chr11:33310714-33311011 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 18, 68

Conread position: 264-603
Cow position: chr11:65157664-65157322 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 47, 65

Conread position: 266-603
Cow position: chr11:18707068-18706739 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 99

Conread position: 266-603
Cow position: chr11:77319169-77319500 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 74

Conread position: 267-544
Cow position: chr11:38071111-38071388 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 20

Conread position: 267-600
Cow position: chr11:48544190-48544524 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 12

Conread position: 267-601
Cow position: chr11:66188575-66188234 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 137

Conread position: 267-603
Cow position: chr11:34120944-34121284 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 175

Conread position: 268-432
Cow position: chr11:3241109-3241275 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 31

Conread position: 268-446
Cow position: chr11:63520520-63520702 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 97

Conread position: 268-563
Cow position: chr11:81281692-81282004 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 187

Conread position: 268-565
Cow position: chr11:39808736-39809037 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 153

Conread position: 268-577
Cow position: chr11:3726033-3726349 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 41, 194

Conread position: 268-600
Cow position: chr11:35154080-35153741 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 185

Conread position: 269-527
Cow position: chr11:26117968-26117715 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 68

Conread position: 269-603
Cow position: chr11:20238421-20238762 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 182

Conread position: 275-603
Cow position: chr11:2083902-2084229 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 65

Conread position: 275-603
Cow position: chr11:47899031-47899354 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 35, 180

Conread position: 279-455
Cow position: chr11:2832912-2832732 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 68

Conread position: 279-603
Cow position: chr11:2907767-2907443 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 196

Conread position: 280-453
Cow position: chr11:10687128-10686951 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 135

Conread position: 281-519
Cow position: chr11:62808888-62808653 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 171

Conread position: 281-534
Cow position: chr11:57769590-57769351 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 80

Conread position: 281-558
Cow position: chr11:57725068-57724784 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 175

Conread position: 281-601
Cow position: chr11:36659052-36658739 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 281-603
Cow position: chr11:26144324-26144010 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 53

Conread position: 281-603
Cow position: chr11:62239510-62239830 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 32

Conread position: 282-603
Cow position: chr11:27405307-27404989 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 144

Conread position: 283-596
Cow position: chr11:64904758-64905076 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 169

Conread position: 284-453
Cow position: chr11:41438461-41438284 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 173

Conread position: 286-519
Cow position: chr11:35668953-35668712 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 169

Conread position: 286-556
Cow position: chr11:14094659-14094381 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 118

Conread position: 286-563
Cow position: chr11:4663273-4663000 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 57

Conread position: 286-601
Cow position: chr11:71501357-71501048 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 24, 39

Conread position: 286-603
Cow position: chr11:62620150-62620462 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 122

Conread position: 287-538
Cow position: chr11:25620629-25620380 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 136

Conread position: 287-603
Cow position: chr11:36112184-36112505 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 23, 129

Conread position: 290-445
Cow position: chr11:19755426-19755590 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 145

Conread position: 290-460
Cow position: chr11:6329015-6329192 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 21, 166

Conread position: 290-557
Cow position: chr11:31417205-31417461 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 36

Conread position: 290-564
Cow position: chr11:21728498-21728229 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 144

Conread position: 290-602
Cow position: chr11:77546188-77546499 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 20, 119

Conread position: 290-603
Cow position: chr11:32436098-32436419 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 135

Conread position: 290-603
Cow position: chr11:42044221-42043911 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 109

Conread position: 292-550
Cow position: chr11:18591662-18591401 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 18, 162

Conread position: 292-558
Cow position: chr11:18341267-18341000 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 103

Conread position: 292-571
Cow position: chr11:38874630-38874348 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 157

Conread position: 294-603
Cow position: chr11:29960078-29960381 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 102

Conread position: 296-603
Cow position: chr11:69810679-69810989 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 129

Conread position: 297-516
Cow position: chr11:37100583-37100361 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 160

Conread position: 297-550
Cow position: chr11:61246681-61246426 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 34

Conread position: 297-550
Cow position: chr11:81406381-81406136 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 154

Conread position: 298-571
Cow position: chr11:39462395-39462677 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 134

Conread position: 298-597
Cow position: chr11:14470144-14470445 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 161

Conread position: 298-603
Cow position: chr11:17660872-17661169 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 143

Conread position: 298-603
Cow position: chr11:23586413-23586724 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 141

Conread position: 299-603
Cow position: chr11:2925512-2925215 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 11, 121

Conread position: 299-603
Cow position: chr11:34145138-34144839 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 11, 95

Conread position: 300-516
Cow position: chr11:21830573-21830352 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 61

Conread position: 301-511
Cow position: chr11:17574540-17574342 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 39

Conread position: 301-545
Cow position: chr11:82108107-82107867 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 32

Conread position: 303-563
Cow position: chr11:5485791-5486060 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 151

Conread position: 307-563
Cow position: chr11:23272210-23271957 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 12

Conread position: 307-595
Cow position: chr11:65762809-65762513 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 54, 35

Conread position: 307-603
Cow position: chr11:11557956-11558257 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 53, 143

Conread position: 308-557
Cow position: chr11:2811935-2811690 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 31

Conread position: 310-603
Cow position: chr11:61958959-61958659 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 145

Conread position: 314-603
Cow position: chr11:71493066-71492776 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 143

Conread position: 315-571
Cow position: chr11:27913070-27913338 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 102

Conread position: 318-591
Cow position: chr11:30830816-30830540 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 132

Conread position: 319-498
Cow position: chr11:47850826-47851004 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 133

Conread position: 319-536
Cow position: chr11:17553543-17553331 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 53

Conread position: 319-555
Cow position: chr11:1157445-1157681 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 133

Conread position: 319-571
Cow position: chr11:53511884-53512136 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 18, 5

Conread position: 320-603
Cow position: chr11:66572698-66572412 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 12

Conread position: 321-603
Cow position: chr11:40573529-40573250 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 11

Conread position: 322-524
Cow position: chr11:18399528-18399324 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 8

Conread position: 325-537
Cow position: chr11:48042233-48042017 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 129

Conread position: 327-555
Cow position: chr11:67136631-67136393 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 90

Conread position: 328-563
Cow position: chr11:37804745-37804507 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 88

Conread position: 330-536
Cow position: chr11:65607879-65607674 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 120

Conread position: 330-558
Cow position: chr11:20684765-20684531 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 123

Conread position: 330-558
Cow position: chr11:48383341-48383561 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 62, 30

Conread position: 330-561
Cow position: chr11:9463643-9463879 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 120

Conread position: 330-563
Cow position: chr11:13592548-13592782 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 30, 90

Conread position: 330-563
Cow position: chr11:19592183-19591948 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 126

Conread position: 330-563
Cow position: chr11:47639216-47638981 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 116

Conread position: 330-571
Cow position: chr11:63434244-63434004 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 120

Conread position: 330-580
Cow position: chr11:36286513-36286758 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 25

Conread position: 330-591
Cow position: chr11:72375874-72375607 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 120

Conread position: 330-597
Cow position: chr11:27764967-27765233 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 91

Conread position: 330-601
Cow position: chr11:70601009-70600746 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 122

Conread position: 330-603
Cow position: chr11:34646403-34646675 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 30, 87

Conread position: 330-603
Cow position: chr11:36238595-36238863 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 120

Conread position: 330-603
Cow position: chr11:41215558-41215818 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 25

Conread position: 331-524
Cow position: chr11:36301265-36301074 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 121

Conread position: 331-531
Cow position: chr11:36672235-36672033 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 122

Conread position: 332-554
Cow position: chr11:79960975-79960748 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 119

Conread position: 337-563
Cow position: chr11:59862031-59862254 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 84

Conread position: 338-504
Cow position: chr11:61299158-61298996 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 134, 18

Conread position: 338-546
Cow position: chr11:17493300-17493506 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 183, 95

Conread position: 338-603
Cow position: chr11:5286-5549 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 82

Conread position: 339-563
Cow position: chr11:41176131-41175902 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 8, 111

Conread position: 339-603
Cow position: chr11:70086145-70086418 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 115

Conread position: 343-440
Cow position: chr11:19577461-19577559 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 13

Conread position: 343-469
Cow position: chr11:29786776-29786652 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 12

Conread position: 343-476
Cow position: chr11:67207570-67207700 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 12

Conread position: 343-523
Cow position: chr11:65843264-65843094 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 146, 12

Conread position: 343-529
Cow position: chr11:33468537-33468719 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 9

Conread position: 343-561
Cow position: chr11:7458462-7458238 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 107

Conread position: 343-561
Cow position: chr11:38670507-38670725 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 108

Conread position: 343-561
Cow position: chr11:83687603-83687390 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 49, 17

Conread position: 343-564
Cow position: chr11:60143474-60143255 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 72

Conread position: 343-601
Cow position: chr11:9270903-9270643 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 109

Conread position: 343-601
Cow position: chr11:63909833-63909583 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 17, 76

Conread position: 343-603
Cow position: chr11:28993904-28993654 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 115, 17

Conread position: 343-603
Cow position: chr11:30954823-30955086 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 108

Conread position: 344-524
Cow position: chr11:15525779-15525971 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 91

Conread position: 344-556
Cow position: chr11:57171001-57170791 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 176, 16

Conread position: 344-601
Cow position: chr11:71008961-71009207 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 103

Conread position: 345-519
Cow position: chr11:47109796-47109972 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 112

Conread position: 345-532
Cow position: chr11:8545186-8545005 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 61

Conread position: 345-549
Cow position: chr11:21428165-21427961 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 43, 104

Conread position: 347-602
Cow position: chr11:21438044-21438293 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 103

Conread position: 347-603
Cow position: chr11:16907214-16906965 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 13, 45

Conread position: 348-466
Cow position: chr11:29266370-29266490 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 103

Conread position: 349-595
Cow position: chr11:75874921-75874677 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 95

Conread position: 349-603
Cow position: chr11:45434919-45435166 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 172, 77

Conread position: 350-601
Cow position: chr11:55494514-55494763 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 176, 10

Conread position: 351-558
Cow position: chr11:70114304-70114513 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 19

Conread position: 355-603
Cow position: chr11:51729127-51729372 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 68

Conread position: 356-516
Cow position: chr11:86894515-86894678 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 95

Conread position: 356-529
Cow position: chr11:51626803-51626973 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 12

Conread position: 356-541
Cow position: chr11:30543457-30543639 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 35, 108

Conread position: 356-555
Cow position: chr11:56349176-56348985 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 93

Conread position: 356-561
Cow position: chr11:80756944-80756737 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 91

Conread position: 356-603
Cow position: chr11:40479015-40478767 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 97

Conread position: 359-485
Cow position: chr11:36362042-36361917 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 359-524
Cow position: chr11:63499481-63499322 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 91

Conread position: 359-561
Cow position: chr11:6202289-6202486 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 167, 89

Conread position: 359-571
Cow position: chr11:32693629-32693430 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 73

Conread position: 359-601
Cow position: chr11:71390721-71390482 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 86

Conread position: 360-603
Cow position: chr11:42296774-42296534 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 171, 88

Conread position: 360-603
Cow position: chr11:48295876-48296116 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 130, 88

Conread position: 361-603
Cow position: chr11:63435362-63435606 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 115, 84

Conread position: 362-603
Cow position: chr11:70278263-70278027 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 84

Conread position: 364-523
Cow position: chr11:37546666-37546514 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 364-603
Cow position: chr11:69075756-69075996 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 82

Conread position: 365-563
Cow position: chr11:6245170-6245361 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 84

Conread position: 365-597
Cow position: chr11:52983525-52983755 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 155, 83

Conread position: 365-601
Cow position: chr11:83925895-83926126 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 84

Conread position: 366-551
Cow position: chr11:41134216-41134036 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 22, 84

Conread position: 366-597
Cow position: chr11:71806294-71806071 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 367-529
Cow position: chr11:65435704-65435863 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 79

Conread position: 367-601
Cow position: chr11:86720561-86720335 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 162, 47

Conread position: 368-603
Cow position: chr11:23407313-23407550 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 80

Conread position: 369-603
Cow position: chr11:49057255-49057477 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 76

Conread position: 370-536
Cow position: chr11:85703559-85703717 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 35

Conread position: 371-601
Cow position: chr11:7460763-7460532 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 80

Conread position: 375-601
Cow position: chr11:4653117-4652889 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 376-516
Cow position: chr11:10837669-10837530 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 72

Conread position: 377-601
Cow position: chr11:69977838-69978054 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 154, 36

Conread position: 378-565
Cow position: chr11:52690661-52690472 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 71

Conread position: 378-603
Cow position: chr11:48659793-48660020 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 80, 70

Conread position: 378-603
Cow position: chr11:70206184-70206404 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 37

Conread position: 380-587
Cow position: chr11:70978863-70978664 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 146, 37

Conread position: 381-601
Cow position: chr11:62788993-62789214 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 103, 68

Conread position: 383-603
Cow position: chr11:70756348-70756563 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 383-603
Cow position: chr11:71807704-71807481 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 65

Conread position: 384-528
Cow position: chr11:83000667-83000524 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 64

Conread position: 385-600
Cow position: chr11:64868146-64867938 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 138, 63

Conread position: 388-601
Cow position: chr11:31506717-31506933 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 8

Conread position: 388-603
Cow position: chr11:249614-249396 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 62

Conread position: 388-603
Cow position: chr11:83033366-83033154 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 61

Conread position: 390-571
Cow position: chr11:33345317-33345499 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 68, 55

Conread position: 390-601
Cow position: chr11:27719449-27719247 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 60

Conread position: 391-600
Cow position: chr11:41293944-41293735 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 60

Conread position: 394-603
Cow position: chr11:14466610-14466401 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 6

Conread position: 409-587
Cow position: chr11:75965757-75965582 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 39

Conread position: 426-603
Cow position: chr11:35536497-35536672 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 105, 24

Conread position: 431-601
Cow position: chr11:27565250-27565414 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 18

Show alignments to all cow chromosomes.