Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 307-611 |
| Cow position: | chr10:57457821-57458105 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 325-611 |
| Cow position: | chr10:23329173-23329454 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 328-611 |
| Cow position: | chr10:39940233-39939967 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 335-467 |
| Cow position: | chr10:55098531-55098398 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 338-478 |
| Cow position: | chr10:14908677-14908817 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 109 |
| Conread position: | 338-585 |
| Cow position: | chr10:40737098-40737344 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 338-609 |
| Cow position: | chr10:20516337-20516613 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 109, 84 |
| Conread position: | 338-610 |
| Cow position: | chr10:53058882-53058608 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 138, 70 |
| Conread position: | 338-611 |
| Cow position: | chr10:1720444-1720173 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 130 |
| Conread position: | 338-611 |
| Cow position: | chr10:6012916-6012653 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 338-611 |
| Cow position: | chr10:9527279-9527023 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 338-611 |
| Cow position: | chr10:9799095-9798838 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 338-611 |
| Cow position: | chr10:22528801-22528538 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 338-611 |
| Cow position: | chr10:47772837-47773101 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 338-611 |
| Cow position: | chr10:60960034-60960294 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 341-588 |
| Cow position: | chr10:41406087-41406323 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 341-611 |
| Cow position: | chr10:22978733-22978482 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 341-611 |
| Cow position: | chr10:24785207-24785458 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 356-611 |
| Cow position: | chr10:7385128-7384871 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 18, 115 |
| Conread position: | 365-463 |
| Cow position: | chr10:14948210-14948308 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-604 |
| Cow position: | chr10:35246631-35246407 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 365-610 |
| Cow position: | chr10:7736939-7737176 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 365-610 |
| Cow position: | chr10:21656567-21656790 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 365-610 |
| Cow position: | chr10:46378647-46378410 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 365-611 |
| Cow position: | chr10:6253361-6253130 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 365-611 |
| Cow position: | chr10:21423134-21422905 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 365-611 |
| Cow position: | chr10:21729253-21729021 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 365-611 |
| Cow position: | chr10:28932884-28933114 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 365-611 |
| Cow position: | chr10:32581914-32582147 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 365-611 |
| Cow position: | chr10:33664965-33665206 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 131, 43 |
| Conread position: | 365-611 |
| Cow position: | chr10:35308298-35308530 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 208, 94 |
| Conread position: | 365-611 |
| Cow position: | chr10:39876000-39875764 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 365-611 |
| Cow position: | chr10:43288932-43288695 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 365-611 |
| Cow position: | chr10:61923139-61922907 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 365-611 |
| Cow position: | chr10:63090203-63090462 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 365-611 |
| Cow position: | chr10:63881688-63881922 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 366-611 |
| Cow position: | chr10:58690051-58690294 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 164, 173 |
| Conread position: | 367-611 |
| Cow position: | chr10:5745884-5745648 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 368-611 |
| Cow position: | chr10:16646859-16646626 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 152, 92 |
| Conread position: | 371-476 |
| Cow position: | chr10:58265407-58265302 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-611 |
| Cow position: | chr10:5068758-5068996 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 371-611 |
| Cow position: | chr10:6567344-6567566 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 371-612 |
| Cow position: | chr10:9569408-9569183 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 372-611 |
| Cow position: | chr10:27094845-27094617 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 372-611 |
| Cow position: | chr10:31218912-31219146 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 52, 98 |
| Conread position: | 372-611 |
| Cow position: | chr10:37754862-37755086 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 373-611 |
| Cow position: | chr10:5508930-5508696 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 373-611 |
| Cow position: | chr10:42460386-42460166 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 373-612 |
| Cow position: | chr10:9445823-9445594 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 156, 41 |
| Conread position: | 375-611 |
| Cow position: | chr10:5784784-5784561 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 5, 25 |
| Conread position: | 376-611 |
| Cow position: | chr10:32173878-32174103 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 377-611 |
| Cow position: | chr10:21461191-21461409 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 386-611 |
| Cow position: | chr10:1186500-1186720 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 412-611 |
| Cow position: | chr10:42347248-42347057 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.