Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 327-610 |
| Cow position: | chr11:8829735-8829476 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 338-467 |
| Cow position: | chr11:44937934-44938064 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 338-556 |
| Cow position: | chr11:86578987-86579201 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 338-583 |
| Cow position: | chr11:26068050-26067813 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 338-610 |
| Cow position: | chr11:21853190-21852927 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 338-610 |
| Cow position: | chr11:74928857-74929125 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 338-611 |
| Cow position: | chr11:4206233-4206503 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 250, 123 |
| Conread position: | 338-611 |
| Cow position: | chr11:9870561-9870823 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 338-611 |
| Cow position: | chr11:15995555-15995831 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 144 |
| Conread position: | 338-611 |
| Cow position: | chr11:17279546-17279281 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 338-611 |
| Cow position: | chr11:28394131-28394383 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 338-611 |
| Cow position: | chr11:41106333-41106076 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 242, 129 |
| Conread position: | 338-611 |
| Cow position: | chr11:43644996-43644741 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 338-611 |
| Cow position: | chr11:44106743-44106996 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 338-611 |
| Cow position: | chr11:50950011-50950286 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 114, 98 |
| Conread position: | 338-611 |
| Cow position: | chr11:56652182-56651911 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 338-611 |
| Cow position: | chr11:64904148-64904419 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 196 |
| Conread position: | 341-557 |
| Cow position: | chr11:64047450-64047657 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 364-603 |
| Cow position: | chr11:46412722-46412956 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 365-478 |
| Cow position: | chr11:28692885-28692773 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 365-582 |
| Cow position: | chr11:25332650-25332433 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 162, 102 |
| Conread position: | 365-611 |
| Cow position: | chr11:1504908-1504677 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 365-611 |
| Cow position: | chr11:17037448-17037216 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 365-611 |
| Cow position: | chr11:18389741-18389500 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 106 |
| Conread position: | 365-611 |
| Cow position: | chr11:40458264-40458491 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 365-611 |
| Cow position: | chr11:56228017-56228278 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 365-611 |
| Cow position: | chr11:67848884-67848643 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 365-611 |
| Cow position: | chr11:73513284-73513053 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 124, 24 |
| Conread position: | 365-611 |
| Cow position: | chr11:75206115-75206353 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 191, 26 |
| Conread position: | 365-612 |
| Cow position: | chr11:12316982-12316743 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 366-611 |
| Cow position: | chr11:17832118-17831879 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 366-611 |
| Cow position: | chr11:35361871-35362108 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 368-480 |
| Cow position: | chr11:21820311-21820198 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 370-597 |
| Cow position: | chr11:6734094-6733879 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 370-611 |
| Cow position: | chr11:2309012-2309244 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 371-569 |
| Cow position: | chr11:18105593-18105401 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 371-578 |
| Cow position: | chr11:27284529-27284724 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 371-581 |
| Cow position: | chr11:19490635-19490835 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 160, 68 |
| Conread position: | 371-611 |
| Cow position: | chr11:30790699-30790467 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 196, 81 |
| Conread position: | 371-611 |
| Cow position: | chr11:63167430-63167202 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 371-611 |
| Cow position: | chr11:64844165-64844375 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 372-543 |
| Cow position: | chr11:83284976-83285143 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 373-611 |
| Cow position: | chr11:23494841-23495070 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 375-611 |
| Cow position: | chr11:18890406-18890641 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 109, 71 |
| Conread position: | 376-611 |
| Cow position: | chr11:8246282-8246502 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 376-611 |
| Cow position: | chr11:31865732-31865967 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 376-611 |
| Cow position: | chr11:48739988-48739761 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 376-611 |
| Cow position: | chr11:71078522-71078743 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 377-583 |
| Cow position: | chr11:76960547-76960739 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 377-611 |
| Cow position: | chr11:41098307-41098066 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 377-611 |
| Cow position: | chr11:74217077-74216842 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 379-611 |
| Cow position: | chr11:67599673-67599899 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 382-588 |
| Cow position: | chr11:37290390-37290587 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 382-611 |
| Cow position: | chr11:3394058-3393841 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 140, 62 |
| Conread position: | 383-607 |
| Cow position: | chr11:16592650-16592879 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 383-611 |
| Cow position: | chr11:30057301-30057517 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 388-610 |
| Cow position: | chr11:19239012-19238802 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 73 |
| Conread position: | 388-611 |
| Cow position: | chr11:41033008-41033220 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 64 |
| Conread position: | 415-610 |
| Cow position: | chr11:38578630-38578431 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 77 |
Show alignments to all cow chromosomes.