Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 283-569 |
| Cow position: | chr16:12736883-12737158 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 181 |
| Conread position: | 326-610 |
| Cow position: | chr16:49387937-49388222 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 337-609 |
| Cow position: | chr16:48341548-48341291 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 338-464 |
| Cow position: | chr16:47367648-47367774 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 338-569 |
| Cow position: | chr16:42079695-42079483 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 121 |
| Conread position: | 338-604 |
| Cow position: | chr16:28268054-28267806 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 338-611 |
| Cow position: | chr16:5416614-5416355 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 255, 104 |
| Conread position: | 338-611 |
| Cow position: | chr16:14029499-14029237 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 216, 129 |
| Conread position: | 338-611 |
| Cow position: | chr16:27013059-27013313 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 338-611 |
| Cow position: | chr16:31425720-31425973 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 338-611 |
| Cow position: | chr16:43801738-43801482 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 338-612 |
| Cow position: | chr16:18745376-18745118 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 341-611 |
| Cow position: | chr16:42074233-42073975 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 69, 62 |
| Conread position: | 364-611 |
| Cow position: | chr16:24876274-24876046 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 203, 45 |
| Conread position: | 364-611 |
| Cow position: | chr16:47517997-47518228 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 365-462 |
| Cow position: | chr16:28112833-28112736 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-478 |
| Cow position: | chr16:41624001-41623889 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 365-479 |
| Cow position: | chr16:18948772-18948889 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 365-537 |
| Cow position: | chr16:53548406-53548245 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 103 |
| Conread position: | 365-543 |
| Cow position: | chr16:45559982-45560153 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 64 |
| Conread position: | 365-569 |
| Cow position: | chr16:8871754-8871564 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 365-588 |
| Cow position: | chr16:7457297-7457084 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 365-611 |
| Cow position: | chr16:5632324-5632067 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 365-611 |
| Cow position: | chr16:18204917-18205150 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 132, 94 |
| Conread position: | 365-611 |
| Cow position: | chr16:28022383-28022151 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 365-611 |
| Cow position: | chr16:46223822-46223585 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 213, 102 |
| Conread position: | 365-611 |
| Cow position: | chr16:47247761-47248007 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 92, 149 |
| Conread position: | 366-611 |
| Cow position: | chr16:13601952-13601703 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 371-604 |
| Cow position: | chr16:51997650-51997407 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 371-610 |
| Cow position: | chr16:49577669-49577892 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 371-610 |
| Cow position: | chr16:50518858-50519090 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 371-611 |
| Cow position: | chr16:41858356-41858581 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 371-612 |
| Cow position: | chr16:37058320-37058081 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 375-465 |
| Cow position: | chr16:43813255-43813345 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 77 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-608 |
| Cow position: | chr16:26666404-26666627 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 376-609 |
| Cow position: | chr16:7701468-7701693 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 376-611 |
| Cow position: | chr16:34533119-34533347 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 376-611 |
| Cow position: | chr16:55682200-55682428 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 382-610 |
| Cow position: | chr16:53225637-53225417 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 163, 85 |
| Conread position: | 382-611 |
| Cow position: | chr16:45158268-45158051 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 410-611 |
| Cow position: | chr16:40271244-40271444 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 130 |
Show alignments to all cow chromosomes.