Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 328-459 |
| Cow position: | chr17:5748630-5748498 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 328-611 |
| Cow position: | chr17:40801960-40802244 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 156, 80 |
| Conread position: | 332-497 |
| Cow position: | chr17:13717078-13716915 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 158, 76 |
| Conread position: | 338-475 |
| Cow position: | chr17:36159812-36159676 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 124, 114 |
| Conread position: | 338-479 |
| Cow position: | chr17:144984-144845 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 338-494 |
| Cow position: | chr17:4085289-4085439 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 338-571 |
| Cow position: | chr17:22563366-22563584 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 338-611 |
| Cow position: | chr17:4211151-4211411 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 338-611 |
| Cow position: | chr17:27978326-27978581 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 338-611 |
| Cow position: | chr17:41893169-41892901 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 341-611 |
| Cow position: | chr17:29156598-29156860 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 365-464 |
| Cow position: | chr17:34000125-34000026 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-575 |
| Cow position: | chr17:3780899-3781093 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 365-604 |
| Cow position: | chr17:32457210-32456975 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 177, 102 |
| Conread position: | 365-611 |
| Cow position: | chr17:18340231-18339998 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 61, 79 |
| Conread position: | 366-465 |
| Cow position: | chr17:13674243-13674143 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 366-611 |
| Cow position: | chr17:2078888-2079107 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 371-611 |
| Cow position: | chr17:2033747-2033973 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 371-611 |
| Cow position: | chr17:18198609-18198860 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 371-611 |
| Cow position: | chr17:33934566-33934339 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 376-611 |
| Cow position: | chr17:34317518-34317285 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 377-611 |
| Cow position: | chr17:4298398-4298620 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 378-586 |
| Cow position: | chr17:18200983-18201180 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 383-578 |
| Cow position: | chr17:15365876-15366056 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 384-611 |
| Cow position: | chr17:4920702-4920921 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 386-611 |
| Cow position: | chr17:4107796-4107584 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 45 |
Show alignments to all cow chromosomes.