Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 328-611 |
| Cow position: | chr2:74210811-74210541 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 257, 138 |
| Conread position: | 330-610 |
| Cow position: | chr2:7466298-7466570 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 11 |
| Conread position: | 338-549 |
| Cow position: | chr2:21407368-21407582 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 167, 41 |
| Conread position: | 338-603 |
| Cow position: | chr2:55876535-55876782 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 338-610 |
| Cow position: | chr2:11899281-11899540 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 236, 27 |
| Conread position: | 338-611 |
| Cow position: | chr2:14348894-14349157 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 338-611 |
| Cow position: | chr2:32455564-32455307 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 255, 128 |
| Conread position: | 338-611 |
| Cow position: | chr2:51480063-51480322 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 341-611 |
| Cow position: | chr2:9370946-9370688 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 364-604 |
| Cow position: | chr2:72737241-72737009 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 365-465 |
| Cow position: | chr2:33390316-33390416 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-467 |
| Cow position: | chr2:21210652-21210754 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-489 |
| Cow position: | chr2:56076255-56076378 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 365-610 |
| Cow position: | chr2:36867637-36867403 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 162, 93 |
| Conread position: | 365-611 |
| Cow position: | chr2:4917147-4916905 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 365-611 |
| Cow position: | chr2:17941128-17940893 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 365-611 |
| Cow position: | chr2:70934028-70933802 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 366-583 |
| Cow position: | chr2:58978013-58978231 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 366-611 |
| Cow position: | chr2:31124938-31125174 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 368-611 |
| Cow position: | chr2:11961964-11962195 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 370-611 |
| Cow position: | chr2:9407473-9407710 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 371-602 |
| Cow position: | chr2:6241235-6241470 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 371-611 |
| Cow position: | chr2:35463629-35463858 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 371-611 |
| Cow position: | chr2:37809605-37809375 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 371-611 |
| Cow position: | chr2:43877777-43878003 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 371-611 |
| Cow position: | chr2:62225344-62225567 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 371-611 |
| Cow position: | chr2:68359679-68359448 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 372-465 |
| Cow position: | chr2:83746231-83746138 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-601 |
| Cow position: | chr2:295066-294829 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 58, 103 |
| Conread position: | 372-611 |
| Cow position: | chr2:17426347-17426570 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 156, 97 |
| Conread position: | 373-611 |
| Cow position: | chr2:43525928-43525688 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 373-612 |
| Cow position: | chr2:46208358-46208120 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 375-583 |
| Cow position: | chr2:30924396-30924601 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 376-588 |
| Cow position: | chr2:15811861-15812061 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 376-610 |
| Cow position: | chr2:36135832-36136066 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 170 |
| Conread position: | 376-611 |
| Cow position: | chr2:832710-832472 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 376-611 |
| Cow position: | chr2:981933-982165 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 91 |
| Conread position: | 376-611 |
| Cow position: | chr2:31450987-31451211 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 376-611 |
| Cow position: | chr2:41157111-41157328 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 376-611 |
| Cow position: | chr2:85739292-85739518 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 383-611 |
| Cow position: | chr2:4725902-4726123 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 164, 90 |
| Conread position: | 383-611 |
| Cow position: | chr2:9528346-9528563 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 186, 52 |
| Conread position: | 384-611 |
| Cow position: | chr2:63274740-63274528 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 412-611 |
| Cow position: | chr2:42939186-42938996 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 412-611 |
| Cow position: | chr2:50352070-50352261 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 412-611 |
| Cow position: | chr2:68110517-68110325 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 412-611 |
| Cow position: | chr2:72757501-72757701 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 456-611 |
| Cow position: | chr2:55632010-55632165 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.