Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 314-611 |
| Cow position: | chr20:21018707-21018995 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 5 |
| Conread position: | 338-525 |
| Cow position: | chr20:4205063-4205252 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 118, 146 |
| Conread position: | 338-558 |
| Cow position: | chr20:9996950-9997154 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 338-611 |
| Cow position: | chr20:9007421-9007165 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 338-611 |
| Cow position: | chr20:9432785-9433042 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 189, 98 |
| Conread position: | 338-611 |
| Cow position: | chr20:20364330-20364052 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 109, 51 |
| Conread position: | 338-611 |
| Cow position: | chr20:31846414-31846150 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 341-611 |
| Cow position: | chr20:3782286-3782030 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 341-611 |
| Cow position: | chr20:20779368-20779109 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 343-611 |
| Cow position: | chr20:14473031-14472781 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 365-464 |
| Cow position: | chr20:26999936-27000035 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-601 |
| Cow position: | chr20:30263489-30263251 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 100, 75 |
| Conread position: | 365-611 |
| Cow position: | chr20:6055290-6055052 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 156, 92 |
| Conread position: | 365-611 |
| Cow position: | chr20:6258858-6258624 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 365-611 |
| Cow position: | chr20:10839021-10838783 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 365-611 |
| Cow position: | chr20:11888574-11888320 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 365-611 |
| Cow position: | chr20:12155931-12155675 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 228 |
| Conread position: | 365-611 |
| Cow position: | chr20:20983219-20983459 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 169, 94 |
| Conread position: | 365-611 |
| Cow position: | chr20:28956510-28956271 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 133, 92 |
| Conread position: | 366-497 |
| Cow position: | chr20:3468819-3468950 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 124, 103 |
| Conread position: | 366-610 |
| Cow position: | chr20:35843994-35843757 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 371-574 |
| Cow position: | chr20:13050111-13049910 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 85, 100 |
| Conread position: | 371-610 |
| Cow position: | chr20:38123170-38123402 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 371-611 |
| Cow position: | chr20:10235054-10235278 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 371-611 |
| Cow position: | chr20:33767284-33767525 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 371-611 |
| Cow position: | chr20:34375408-34375643 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 155, 110 |
| Conread position: | 371-611 |
| Cow position: | chr20:39446995-39447234 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 376-611 |
| Cow position: | chr20:13789516-13789750 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 376-611 |
| Cow position: | chr20:24507627-24507403 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 376-611 |
| Cow position: | chr20:25844881-25844637 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 86, 221 |
| Conread position: | 378-611 |
| Cow position: | chr20:13817074-13817296 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 379-611 |
| Cow position: | chr20:9707684-9707459 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 382-610 |
| Cow position: | chr20:29806476-29806261 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 385-611 |
| Cow position: | chr20:10288139-10288351 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 391-611 |
| Cow position: | chr20:37583457-37583670 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 404-611 |
| Cow position: | chr20:6476972-6477177 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 55, 10 |
Show alignments to all cow chromosomes.