Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 284-590 |
| Cow position: | chr21:21427347-21427649 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 327-611 |
| Cow position: | chr21:31252499-31252779 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 34, 131 |
| Conread position: | 328-611 |
| Cow position: | chr21:21216961-21216686 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 338-474 |
| Cow position: | chr21:31275866-31276001 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 338-608 |
| Cow position: | chr21:48108659-48108396 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 207, 120 |
| Conread position: | 338-610 |
| Cow position: | chr21:6623335-6623600 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 338-611 |
| Cow position: | chr21:1057986-1058252 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 118, 108 |
| Conread position: | 338-611 |
| Cow position: | chr21:8419640-8419901 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 193, 87 |
| Conread position: | 338-611 |
| Cow position: | chr21:20263152-20262885 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 338-611 |
| Cow position: | chr21:28028154-28028413 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 363-611 |
| Cow position: | chr21:5899223-5898958 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 63, 193 |
| Conread position: | 364-578 |
| Cow position: | chr21:18979620-18979417 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 364-611 |
| Cow position: | chr21:15546143-15545910 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 365-550 |
| Cow position: | chr21:28441993-28442171 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 365-607 |
| Cow position: | chr21:12802563-12802333 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 95 |
| Conread position: | 365-610 |
| Cow position: | chr21:27608151-27607913 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 365-610 |
| Cow position: | chr21:30627532-30627306 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 365-611 |
| Cow position: | chr21:81289-81525 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 365-611 |
| Cow position: | chr21:9201405-9201638 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 209, 90 |
| Conread position: | 365-611 |
| Cow position: | chr21:28811036-28810803 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 367-611 |
| Cow position: | chr21:3766216-3765987 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 370-606 |
| Cow position: | chr21:4722193-4722422 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 158, 89 |
| Conread position: | 371-611 |
| Cow position: | chr21:7155931-7156158 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 371-611 |
| Cow position: | chr21:9863389-9863162 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 171, 70 |
| Conread position: | 371-611 |
| Cow position: | chr21:38900001-38900226 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 371-611 |
| Cow position: | chr21:39508420-39508189 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 371-611 |
| Cow position: | chr21:48291798-48291576 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 373-603 |
| Cow position: | chr21:20774054-20774285 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 178 |
| Conread position: | 373-611 |
| Cow position: | chr21:1463465-1463693 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 375-611 |
| Cow position: | chr21:30858503-30858734 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 376-582 |
| Cow position: | chr21:45263-45460 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 376-586 |
| Cow position: | chr21:26830001-26829800 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 376-611 |
| Cow position: | chr21:8890443-8890677 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 207, 85 |
| Conread position: | 377-611 |
| Cow position: | chr21:2768280-2768055 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 190, 97 |
| Conread position: | 379-610 |
| Cow position: | chr21:16532685-16532904 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 379-611 |
| Cow position: | chr21:3586340-3586119 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 383-611 |
| Cow position: | chr21:28056846-28057063 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 383-611 |
| Cow position: | chr21:28730178-28730394 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 420-611 |
| Cow position: | chr21:4277351-4277151 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 431-611 |
| Cow position: | chr21:23605951-23606123 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.