Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 281-611 |
| Cow position: | chr29:40116611-40116943 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 338-557 |
| Cow position: | chr29:4217655-4217869 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 184, 95 |
| Conread position: | 338-586 |
| Cow position: | chr29:10297500-10297271 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 338-610 |
| Cow position: | chr29:11786364-11786623 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 67, 123 |
| Conread position: | 338-611 |
| Cow position: | chr29:4119984-4120242 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 338-611 |
| Cow position: | chr29:13077059-13077328 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 187, 131 |
| Conread position: | 338-611 |
| Cow position: | chr29:17153598-17153869 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 341-465 |
| Cow position: | chr29:2298954-2298830 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 342-532 |
| Cow position: | chr29:799297-799104 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 181 |
| Conread position: | 365-550 |
| Cow position: | chr29:1605348-1605168 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 365-609 |
| Cow position: | chr29:7604791-7605017 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 365-610 |
| Cow position: | chr29:24265645-24265876 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 219, 89 |
| Conread position: | 365-611 |
| Cow position: | chr29:649422-649656 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 365-611 |
| Cow position: | chr29:8589353-8589118 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 366-609 |
| Cow position: | chr29:7664610-7664382 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 197, 93 |
| Conread position: | 366-610 |
| Cow position: | chr29:21535532-21535301 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 366-611 |
| Cow position: | chr29:2745118-2744885 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 371-479 |
| Cow position: | chr29:18360890-18360782 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 371-610 |
| Cow position: | chr29:5668769-5668540 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 371-610 |
| Cow position: | chr29:29701814-29701589 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 65, 88 |
| Conread position: | 371-611 |
| Cow position: | chr29:4519128-4519360 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 175, 86 |
| Conread position: | 371-611 |
| Cow position: | chr29:9939399-9939181 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 372-611 |
| Cow position: | chr29:8137096-8136868 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 372-611 |
| Cow position: | chr29:13553290-13553527 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 87 |
| Conread position: | 374-611 |
| Cow position: | chr29:34735015-34734795 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 382-611 |
| Cow position: | chr29:19761464-19761677 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 382-611 |
| Cow position: | chr29:43517574-43517345 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 107, 55 |
| Conread position: | 409-610 |
| Cow position: | chr29:9332335-9332536 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 142, 78 |
| Conread position: | 411-610 |
| Cow position: | chr29:19946750-19946561 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 145, 56 |
| Conread position: | 412-611 |
| Cow position: | chr29:18879473-18879285 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.