Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 282-535 |
| Cow position: | chr4:65431297-65431542 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 54 |
| Conread position: | 324-611 |
| Cow position: | chr4:20091166-20091449 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 146 |
| Conread position: | 338-476 |
| Cow position: | chr4:21364150-21364287 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 338-479 |
| Cow position: | chr4:36754866-36755006 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 338-578 |
| Cow position: | chr4:52086237-52086472 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 94, 144 |
| Conread position: | 338-585 |
| Cow position: | chr4:30508279-30508515 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 338-611 |
| Cow position: | chr4:4086289-4086032 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 338-611 |
| Cow position: | chr4:7806249-7806506 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 338-611 |
| Cow position: | chr4:8442167-8441908 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 338-611 |
| Cow position: | chr4:25226052-25226311 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 192, 112 |
| Conread position: | 338-611 |
| Cow position: | chr4:25878502-25878779 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 338-611 |
| Cow position: | chr4:32839419-32839161 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 338-611 |
| Cow position: | chr4:35868275-35868535 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 338-611 |
| Cow position: | chr4:65842817-65842542 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 217, 129 |
| Conread position: | 338-611 |
| Cow position: | chr4:66900687-66900955 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 339-610 |
| Cow position: | chr4:47774510-47774255 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 343-611 |
| Cow position: | chr4:10993195-10992927 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 364-611 |
| Cow position: | chr4:22743492-22743723 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 178, 66 |
| Conread position: | 365-465 |
| Cow position: | chr4:22073991-22073891 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-564 |
| Cow position: | chr4:16606067-16605871 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 365-576 |
| Cow position: | chr4:20606845-20607050 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 365-577 |
| Cow position: | chr4:11107976-11107782 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 365-581 |
| Cow position: | chr4:3849706-3849912 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 365-588 |
| Cow position: | chr4:55509747-55509528 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 365-591 |
| Cow position: | chr4:1239323-1239109 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 365-604 |
| Cow position: | chr4:68880625-68880854 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 365-611 |
| Cow position: | chr4:8673830-8674066 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 365-611 |
| Cow position: | chr4:14919144-14919396 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 365-611 |
| Cow position: | chr4:19141110-19141356 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 365-611 |
| Cow position: | chr4:19744081-19744314 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 365-611 |
| Cow position: | chr4:25192776-25192528 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 365-611 |
| Cow position: | chr4:27539770-27540001 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 365-611 |
| Cow position: | chr4:50193641-50193873 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 365-611 |
| Cow position: | chr4:54502184-54501944 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 365-612 |
| Cow position: | chr4:44901362-44901602 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 366-577 |
| Cow position: | chr4:42923074-42922871 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 366-611 |
| Cow position: | chr4:22724046-22724299 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 366-611 |
| Cow position: | chr4:60838287-60838525 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 371-485 |
| Cow position: | chr4:2122206-2122095 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 371-569 |
| Cow position: | chr4:21258776-21258964 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 176, 98 |
| Conread position: | 371-611 |
| Cow position: | chr4:58688784-58688561 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 373-468 |
| Cow position: | chr4:45499287-45499382 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 373-580 |
| Cow position: | chr4:68386639-68386832 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 373-609 |
| Cow position: | chr4:54170541-54170757 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 373-611 |
| Cow position: | chr4:20658272-20658031 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 134, 86 |
| Conread position: | 373-611 |
| Cow position: | chr4:61651440-61651216 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 374-611 |
| Cow position: | chr4:19033758-19034007 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 207 |
| Conread position: | 376-590 |
| Cow position: | chr4:5979863-5979651 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 110, 83 |
| Conread position: | 376-611 |
| Cow position: | chr4:62569803-62570029 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 213, 80 |
| Conread position: | 377-604 |
| Cow position: | chr4:22316844-22317063 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 377-611 |
| Cow position: | chr4:1935404-1935181 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 386-611 |
| Cow position: | chr4:9291924-9292140 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 401-594 |
| Cow position: | chr4:59783807-59783993 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 67 |
Show alignments to all cow chromosomes.