Cow genome map
| Conread name: | Mixg-0007b10 |
| Conread position: | 327-611 |
| Cow position: | chr6:59596550-59596831 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 328-611 |
| Cow position: | chr6:6471626-6471342 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 137, 154 |
| Conread position: | 338-604 |
| Cow position: | chr6:67186861-67187122 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 342-611 |
| Cow position: | chr6:53461855-53461594 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 343-611 |
| Cow position: | chr6:48947332-48947070 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 344-611 |
| Cow position: | chr6:58036607-58036860 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 365-474 |
| Cow position: | chr6:65941664-65941553 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 365-563 |
| Cow position: | chr6:55474653-55474842 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 365-574 |
| Cow position: | chr6:32286898-32287094 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 365-607 |
| Cow position: | chr6:50526856-50527084 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 165, 102 |
| Conread position: | 365-611 |
| Cow position: | chr6:1077915-1077678 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 365-611 |
| Cow position: | chr6:42988458-42988220 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 365-611 |
| Cow position: | chr6:43797551-43797321 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 5 |
| Conread position: | 365-611 |
| Cow position: | chr6:52557304-52557046 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 82, 131 |
| Conread position: | 365-611 |
| Cow position: | chr6:54491590-54491361 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 365-611 |
| Cow position: | chr6:60456012-60456254 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 106 |
| Conread position: | 366-610 |
| Cow position: | chr6:2581951-2582190 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 366-611 |
| Cow position: | chr6:9322349-9322572 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 368-611 |
| Cow position: | chr6:30316595-30316353 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 148, 113 |
| Conread position: | 368-611 |
| Cow position: | chr6:56858606-56858836 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 371-611 |
| Cow position: | chr6:9468881-9469104 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 371-611 |
| Cow position: | chr6:11466717-11466490 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 371-611 |
| Cow position: | chr6:40158189-40157959 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 371-611 |
| Cow position: | chr6:44510439-44510673 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 372-611 |
| Cow position: | chr6:4680955-4681185 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 376-609 |
| Cow position: | chr6:17049731-17049952 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 376-611 |
| Cow position: | chr6:1263514-1263736 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 376-611 |
| Cow position: | chr6:11289109-11288888 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 376-611 |
| Cow position: | chr6:34843355-34843114 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 377-601 |
| Cow position: | chr6:43102680-43102465 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 377-610 |
| Cow position: | chr6:41677287-41677504 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 155, 90 |
| Conread position: | 377-611 |
| Cow position: | chr6:366410-366643 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 377-611 |
| Cow position: | chr6:12352195-12352416 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 220, 90 |
| Conread position: | 377-611 |
| Cow position: | chr6:16625139-16625367 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 377-611 |
| Cow position: | chr6:34030614-34030834 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 378-611 |
| Cow position: | chr6:51385594-51385816 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 381-583 |
| Cow position: | chr6:65538696-65538889 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 149, 78 |
| Conread position: | 383-609 |
| Cow position: | chr6:46570340-46570553 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 385-609 |
| Cow position: | chr6:45618217-45618004 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 175, 84 |
| Conread position: | 385-611 |
| Cow position: | chr6:224140-223922 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 160, 15 |
| Conread position: | 393-611 |
| Cow position: | chr6:26654487-26654696 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 408-611 |
| Cow position: | chr6:32211378-32211195 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.