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Cow genome map

           
Conread name:
           
Mixn-0006h23
        

               
Conread position:
               
1-149
               

               
Cow position:
               
chr10:10046317-10046171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr10:39123970-39123815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr10:5264432-5264582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr10:25475310-25475477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr10:42230396-42230556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr10:26608157-26607985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr10:28569798-28569970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr10:47158837-47159013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr10:9798462-9798287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr10:19402667-19402846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr10:23376732-23376549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr10:30746135-30746314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr10:39646373-39646189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr10:49169325-49169139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr10:51306058-51306246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr10:52152254-52152436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
105, 112
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr10:20811906-20812106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr10:48377915-48377702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr10:8923666-8923878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr10:888658-888867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr10:47976619-47976823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr10:56835010-56835228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr10:25045951-25045741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 82
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr10:60936684-60936895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 74
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr10:23447912-23447692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
87, 198
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr10:29816321-29816540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr10:39268327-39268550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr10:67716715-67716936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr10:6986183-6986401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
181, 25
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr10:10985761-10985525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr10:40924269-40924513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr10:59675875-59675638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr10:14976061-14975825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr10:40551245-40551492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
87, 207
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr10:46226818-46227069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr10:35026211-35026453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr10:20446831-20447077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr10:24971865-24971624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr10:19678599-19678864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr10:58259784-58259533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 211
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr10:10134710-10134983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr10:57457063-57457335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr10:15353593-15353334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr10:41941849-41941568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr10:55580531-55580266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr10:33891356-33891066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr10:32774846-32775123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr10:35912013-35911734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr10:20997545-20997261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr10:24744289-24744572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr10:35857323-35857031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr10:66211566-66211262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr10:22520434-22520130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr10:49568935-49569228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 212
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr10:69698715-69699008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr10:35767347-35767043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr10:24547990-24548306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr10:22786632-22786938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr10:17863315-17863649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 183
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr10:29589111-29588776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 188
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr10:804926-805255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 211
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr10:38014104-38014440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 99
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr10:65424180-65423823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 340
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr10:6252753-6252411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 180
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr10:15318617-15318970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr10:38725391-38725740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 102
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr10:28105341-28104988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr10:20897034-20897382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr10:8934218-8934565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
280, 101
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr10:15872131-15871772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
177, 15
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr10:22472047-22472427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr10:1488581-1488936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
181, 5
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr10:6529930-6530288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 104
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr10:30360261-30360620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 87
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr10:34175265-34174877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 375
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr10:53248277-53247902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr10:54476843-54477199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 52
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr10:24752889-24753246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr10:51696484-51696848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 76
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr10:56475200-56475573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 105
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr10:22567706-22567339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
172, 15
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr10:31374375-31373981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 157
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr10:45769772-45770156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr10:2703954-2704310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr10:12314900-12315261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
181, 24
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr10:39110264-39109901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr10:36001937-36002321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr10:50359646-50360042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr10:69033800-69033429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr10:53973580-53973975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr10:21422424-21422017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr10:52278452-52278869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 202
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr10:29188629-29188200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr10:6505092-6505508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr10:10720945-10720516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr10:41397211-41397631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 219
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr10:6852003-6852422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 189
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr10:7367052-7366634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr10:5151077-5151513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr10:33665571-33666003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 87
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:5600263-5599837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:5890039-5889597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:8093584-8093161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:25699397-25699823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
177, 16
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:30523325-30522902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:39387190-39387610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
28, 264
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:48462610-48462185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 265
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:51288986-51289406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:53674554-53674989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:56828589-56828158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:64876248-64876685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:5543519-5543083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 159
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr10:31401167-31400733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 356
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr10:2613112-2613539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr10:20552918-20553352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr10:24763210-24763670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr10:30224414-30224844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 281
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr10:30352575-30353023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 285
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr10:35802638-35802192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 363
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr10:1976589-1976143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr10:28721522-28721953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:13765432-13764987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:14817432-14816985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:21657152-21657589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:31027910-31027464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:31362478-31362041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:34607289-34607740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:43487442-43487892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 104
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:49146264-49146683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 73
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:50110172-50109721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:54504333-54504782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 237
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:55733868-55733434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr10:46829606-46830049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr10:37014370-37014815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 41
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr10:61588530-61588078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 90
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr10:54848509-54848957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr10:62286283-62286746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr10:46195525-46195971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr10:17073621-17073180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 9
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr10:1978932-1978482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 136
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr10:6489597-6490066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 362
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr10:14946998-14947443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr10:16645463-16644997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 344
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr10:35731794-35731338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr10:35901067-35901509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr10:39227888-39228350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 77
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr10:34661585-34661139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr10:66127588-66128041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 327
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr10:33215528-33215991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr10:24277014-24276535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr10:52569326-52569790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr10:62353197-62353652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 77
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr10:24870896-24871363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 443
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr10:11080689-11081171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 478
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr10:37235820-37235347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr10:49846507-49846972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 329
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr10:49923622-49923167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr10:7304303-7304767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:15867967-15868463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr10:37529538-37529027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 246
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr10:5113318-5113490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr10:14639620-14639449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr10:47091826-47091588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 217
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:31266595-31266343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr10:11221442-11221720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr10:15462230-15462509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr10:16740327-16740048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 219
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr10:29069888-29070183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
45, 216
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr10:37668427-37668067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr10:65132691-65133037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 105
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr10:3998637-3999008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 330
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr10:21082128-21082489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr10:24732042-24732418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 185
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr10:52113933-52113560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 77
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr10:22390325-22390758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr10:52296230-52296658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr10:668615-669049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr10:20095488-20095944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr10:42312640-42313135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 101
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr10:3985180-3985419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
179, 43
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr10:44771389-44771822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 171
               

               
Conread position:
               
3-437
               

               
Cow position:
               
chr10:10048418-10048856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr10:57059548-57059081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
4-142
               

               
Cow position:
               
chr10:69998213-69998070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
4-168
               

               
Cow position:
               
chr10:28835965-28836123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chr10:35715976-35715807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr10:53336669-53336493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr10:57016408-57016200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr10:9445279-9445031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr10:33867642-33867385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr10:10963728-10964005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr10:43438604-43438892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 253
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr10:24308162-24307867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr10:22528167-22527818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 187
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr10:23936218-23936560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr10:29279179-29279536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr10:77124-77471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 175
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr10:35862496-35862125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
84, 324
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr10:59152129-59151757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
68, 72
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr10:32503185-32503586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr10:38133749-38133325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 324
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr10:54730746-54731179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr10:34655377-34654950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 365
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr10:16092950-16093383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr10:23506751-23506316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
4-433
               

               
Cow position:
               
chr10:6719636-6720076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 113
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr10:8403936-8404382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 276
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr10:22616909-22616465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
76, 330
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr10:31527728-31528144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr10:31534485-31534914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr10:51944097-51944534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 12
               

               
Conread position:
               
4-437
               

               
Cow position:
               
chr10:16598423-16598870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 179
               

               
Conread position:
               
4-437
               

               
Cow position:
               
chr10:67443371-67442942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
105, 211
               

               
Conread position:
               
4-448
               

               
Cow position:
               
chr10:45370792-45371247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr10:24871623-24871817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr10:57736429-57736219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr10:1427778-1428055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr10:13391318-13390963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 192
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr10:57786072-57786497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 182
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr10:19372593-19372158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
177, 72
               

               
Conread position:
               
5-437
               

               
Cow position:
               
chr10:11967111-11966666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 163
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr10:60960676-60961137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
5-447
               

               
Cow position:
               
chr10:49456341-49455889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
132, 96
               

               
Conread position:
               
5-450
               

               
Cow position:
               
chr10:35905095-35904648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 274
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr10:2185068-2185279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr10:40906049-40906267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
6-430
               

               
Cow position:
               
chr10:59571633-59572065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
11, 244
               

               
Conread position:
               
6-433
               

               
Cow position:
               
chr10:13586450-13586889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 129
               

               
Conread position:
               
6-466
               

               
Cow position:
               
chr10:37818823-37818352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
7-179
               

               
Cow position:
               
chr10:32928505-32928678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr10:9774081-9774342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 207
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr10:41803159-41802809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 145
               

               
Conread position:
               
7-403
               

               
Cow position:
               
chr10:10468716-10469112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr10:18041922-18042340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 169
               

               
Conread position:
               
7-424
               

               
Cow position:
               
chr10:9576302-9575883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 211
               

               
Conread position:
               
7-434
               

               
Cow position:
               
chr10:15818059-15817619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 305
               

               
Conread position:
               
7-452
               

               
Cow position:
               
chr10:10148387-10148840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
7-461
               

               
Cow position:
               
chr10:28176656-28176202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
81, 253
               

               
Conread position:
               
8-180
               

               
Cow position:
               
chr10:9586772-9586605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
8-219
               

               
Cow position:
               
chr10:59141166-59141390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
8-364
               

               
Cow position:
               
chr10:28776107-28776460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 63
               

               
Conread position:
               
8-448
               

               
Cow position:
               
chr10:38943997-38944450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
129, 318
               

               
Conread position:
               
9-356
               

               
Cow position:
               
chr10:11212851-11213216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 225
               

               
Conread position:
               
9-434
               

               
Cow position:
               
chr10:38370723-38370276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
81, 326
               

               
Conread position:
               
9-438
               

               
Cow position:
               
chr10:39875406-39874959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 174
               

               
Conread position:
               
9-448
               

               
Cow position:
               
chr10:62316308-62316759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr10:17584289-17584030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
173, 78
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr10:6173100-6173375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
10-341
               

               
Cow position:
               
chr10:28395552-28395213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
10-434
               

               
Cow position:
               
chr10:16414844-16414398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
10-434
               

               
Cow position:
               
chr10:35791673-35792107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 219
               

               
Conread position:
               
10-448
               

               
Cow position:
               
chr10:24313149-24312701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 293
               

               
Conread position:
               
10-449
               

               
Cow position:
               
chr10:46150625-46151058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
10-459
               

               
Cow position:
               
chr10:25342332-25342782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 281
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr10:54469642-54469329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
11-420
               

               
Cow position:
               
chr10:23576284-23576702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
11-446
               

               
Cow position:
               
chr10:57461106-57461543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
165, 54
               

               
Conread position:
               
11-455
               

               
Cow position:
               
chr10:24561246-24560791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr10:21037048-21037312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
65, 174
               

               
Conread position:
               
12-343
               

               
Cow position:
               
chr10:60389017-60388672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
90, 166
               

               
Conread position:
               
12-360
               

               
Cow position:
               
chr10:24022538-24022178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
12-434
               

               
Cow position:
               
chr10:67627244-67626825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
12-456
               

               
Cow position:
               
chr10:19104435-19103989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
11, 235
               

               
Conread position:
               
13-181
               

               
Cow position:
               
chr10:61839343-61839509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
13-215
               

               
Cow position:
               
chr10:15294107-15294317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr10:27828082-27828411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
13-348
               

               
Cow position:
               
chr10:8923017-8923367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 282
               

               
Conread position:
               
13-358
               

               
Cow position:
               
chr10:50534130-50533765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 275
               

               
Conread position:
               
13-366
               

               
Cow position:
               
chr10:29920089-29919727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
13-420
               

               
Cow position:
               
chr10:57142477-57142042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 174
               

               
Conread position:
               
13-436
               

               
Cow position:
               
chr10:50183304-50182875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr10:10043350-10043036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
14-355
               

               
Cow position:
               
chr10:23056338-23055979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 329
               

               
Conread position:
               
14-366
               

               
Cow position:
               
chr10:43508739-43509111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
114, 50
               

               
Conread position:
               
14-420
               

               
Cow position:
               
chr10:35820872-35820454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
74, 198
               

               
Conread position:
               
14-464
               

               
Cow position:
               
chr10:63940519-63940979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
15-433
               

               
Cow position:
               
chr10:29251907-29252363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
18-337
               

               
Cow position:
               
chr10:22321265-22321607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 174
               

               
Conread position:
               
18-437
               

               
Cow position:
               
chr10:50559179-50558750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
88, 226
               

               
Conread position:
               
19-216
               

               
Cow position:
               
chr10:37709289-37709084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
19-357
               

               
Cow position:
               
chr10:33067829-33067474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
31, 203
               

               
Conread position:
               
19-460
               

               
Cow position:
               
chr10:35868252-35867819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr10:31779517-31779240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
25-434
               

               
Cow position:
               
chr10:64041838-64042261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
31-454
               

               
Cow position:
               
chr10:25149664-25150082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr10:60722382-60722129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
34-320
               

               
Cow position:
               
chr10:28152619-28152311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
34-358
               

               
Cow position:
               
chr10:37415549-37415893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
34-434
               

               
Cow position:
               
chr10:40164165-40163757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
35-357
               

               
Cow position:
               
chr10:28840718-28841060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
36-440
               

               
Cow position:
               
chr10:45379242-45378814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 299
               

               
Conread position:
               
37-193
               

               
Cow position:
               
chr10:38512941-38513103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
38-211
               

               
Cow position:
               
chr10:32174496-32174680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
38-385
               

               
Cow position:
               
chr10:37913417-37913053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
42-454
               

               
Cow position:
               
chr10:66199932-66199514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
47-434
               

               
Cow position:
               
chr10:3362396-3362826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
48-417
               

               
Cow position:
               
chr10:7816886-7817279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
48-434
               

               
Cow position:
               
chr10:30787830-30787448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
48-449
               

               
Cow position:
               
chr10:1996887-1996485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
49-420
               

               
Cow position:
               
chr10:35246164-35245791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
54-303
               

               
Cow position:
               
chr10:59164312-59164052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
54-419
               

               
Cow position:
               
chr10:45871297-45871679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 279
               

               
Conread position:
               
55-327
               

               
Cow position:
               
chr10:47412323-47412032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
57-324
               

               
Cow position:
               
chr10:33733082-33732801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
57-355
               

               
Cow position:
               
chr10:6665759-6665457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
57-356
               

               
Cow position:
               
chr10:24375336-24375645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
57-437
               

               
Cow position:
               
chr10:7292009-7291636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
57-445
               

               
Cow position:
               
chr10:17022770-17022384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
60-280
               

               
Cow position:
               
chr10:39304062-39303826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
60-321
               

               
Cow position:
               
chr10:24780979-24781257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
61-220
               

               
Cow position:
               
chr10:28222719-28222879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
62-277
               

               
Cow position:
               
chr10:37644867-37645077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
64-434
               

               
Cow position:
               
chr10:19191579-19191930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr10:35779100-35778800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
70-458
               

               
Cow position:
               
chr10:10120000-10120383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
75-434
               

               
Cow position:
               
chr10:4183997-4184380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 284
               

               
Conread position:
               
78-420
               

               
Cow position:
               
chr10:63883761-63884107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
83-460
               

               
Cow position:
               
chr10:51942604-51942992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 270
               

               
Conread position:
               
84-355
               

               
Cow position:
               
chr10:67288115-67288391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
84-431
               

               
Cow position:
               
chr10:52695914-52695554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 275
               

               
Conread position:
               
85-461
               

               
Cow position:
               
chr10:24756232-24756614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
86-434
               

               
Cow position:
               
chr10:11463850-11463484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 169
               

               
Conread position:
               
86-454
               

               
Cow position:
               
chr10:4109409-4109773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
105-342
               

               
Cow position:
               
chr10:30613676-30613916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 92
               

               
Conread position:
               
105-342
               

               
Cow position:
               
chr10:38376814-38376570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
105-434
               

               
Cow position:
               
chr10:60237256-60236924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
105-446
               

               
Cow position:
               
chr10:38240921-38241268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
108-356
               

               
Cow position:
               
chr10:6543563-6543826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 248
               

               
Conread position:
               
108-448
               

               
Cow position:
               
chr10:51804192-51803858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
132, 75
               

               
Conread position:
               
111-460
               

               
Cow position:
               
chr10:30369967-30369627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
167, 62
               

               
Conread position:
               
113-337
               

               
Cow position:
               
chr10:25260099-25260332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
120-430
               

               
Cow position:
               
chr10:6384388-6384698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
62, 228
               

               
Conread position:
               
121-449
               

               
Cow position:
               
chr10:61922285-61921953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
125-366
               

               
Cow position:
               
chr10:69997945-69997686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr10:58451513-58451270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
126-430
               

               
Cow position:
               
chr10:27119108-27118790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 170
               

               
Conread position:
               
126-448
               

               
Cow position:
               
chr10:53075980-53076319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
129-360
               

               
Cow position:
               
chr10:15309535-15309295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
132-420
               

               
Cow position:
               
chr10:37068548-37068259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
66, 191
               

               
Conread position:
               
135-420
               

               
Cow position:
               
chr10:4151414-4151716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
135-518
               

               
Cow position:
               
chr10:46327556-46327944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 222
               

               
Conread position:
               
136-394
               

               
Cow position:
               
chr10:10750384-10750110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 231
               

               
Conread position:
               
136-448
               

               
Cow position:
               
chr10:60446601-60446920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 205
               

               
Conread position:
               
137-483
               

               
Cow position:
               
chr10:52881750-52881390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 195
               

               
Conread position:
               
140-430
               

               
Cow position:
               
chr10:7383738-7383444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
45, 210
               

               
Conread position:
               
140-434
               

               
Cow position:
               
chr10:31005146-31004837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
152-451
               

               
Cow position:
               
chr10:61510056-61509754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 200
               

               
Conread position:
               
156-366
               

               
Cow position:
               
chr10:49947989-49947770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
160-424
               

               
Cow position:
               
chr10:30216815-30216551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 169
               

               
Conread position:
               
165-387
               

               
Cow position:
               
chr10:41760425-41760188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 116
               

               
Conread position:
               
181-353
               

               
Cow position:
               
chr10:52827673-52827499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
181-358
               

               
Cow position:
               
chr10:53405392-53405578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
181-497
               

               
Cow position:
               
chr10:23346387-23346070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
187-424
               

               
Cow position:
               
chr10:58044208-58043961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
191-457
               

               
Cow position:
               
chr10:43586352-43586085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
198-448
               

               
Cow position:
               
chr10:68208185-68208449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
199-467
               

               
Cow position:
               
chr10:2185289-2185567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
200-420
               

               
Cow position:
               
chr10:39622413-39622202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
200-430
               

               
Cow position:
               
chr10:17149820-17150044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 145
               

               
Conread position:
               
202-451
               

               
Cow position:
               
chr10:37426193-37425949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 145
               

               
Conread position:
               
204-448
               

               
Cow position:
               
chr10:10027517-10027763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
204-459
               

               
Cow position:
               
chr10:23340850-23341094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
242, 62
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr10:60697674-60697446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 121
               

               
Conread position:
               
217-427
               

               
Cow position:
               
chr10:23311070-23310856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
225-430
               

               
Cow position:
               
chr10:11112589-11112795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
229-437
               

               
Cow position:
               
chr10:27178465-27178665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
240-420
               

               
Cow position:
               
chr10:19679078-19679267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
240-434
               

               
Cow position:
               
chr10:10829023-10829218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
255-440
               

               
Cow position:
               
chr10:25475536-25475714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
275-434
               

               
Cow position:
               
chr10:60240197-60240044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
280-424
               

               
Cow position:
               
chr10:14668425-14668564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
280-433
               

               
Cow position:
               
chr10:4329970-4329815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
282-454
               

               
Cow position:
               
chr10:16641902-16641734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 60
               
Show alignments to all cow chromosomes.