• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Mixn-0006h23
        

               
Conread position:
               
1-162
               

               
Cow position:
               
chr12:29762882-29762715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr12:19420215-19420038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr12:36042016-36041837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr12:6687586-6687756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr12:4134382-4134569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr12:41214601-41214426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr12:1284741-1284560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 109
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr12:5134856-5135044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr12:25455831-25456018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr12:28011182-28010997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr12:37727864-37728066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
179, 52
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr12:19715310-19715106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr12:20326488-20326706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr12:40307413-40307625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 186
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr12:37733060-37732845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
181, 52
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr12:34385797-34385574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr12:24440529-24440776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 211
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr12:24032723-24032967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr12:2286298-2286565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr12:4116222-4116476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr12:941349-941629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
87, 260
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr12:7977764-7978039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr12:3568663-3568944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr12:12178638-12178926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr12:19664798-19664529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr12:30170384-30170738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr12:9229765-9229425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
105, 174
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr12:19691518-19691159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr12:47803872-47804232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr12:28582775-28582431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
181, 79
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:5905774-5906142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 139
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:26223268-26222900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr12:30605439-30605081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 152
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:7000872-7000518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr12:41473812-41474176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr12:5714346-5714717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr12:45820640-45820273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr12:32714758-32715145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 259
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr12:31429843-31429466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr12:41159314-41159703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr12:42254375-42254792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 348
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr12:5632157-5631745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
107, 87
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr12:18518388-18518815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr12:9143109-9143532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr12:18020569-18021026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr12:32169252-32169694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr12:36118688-36119116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr12:42181424-42180980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 121
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr12:22285383-22284963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 15
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr12:8943503-8943056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr12:6411011-6410573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 101
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr12:7205887-7205465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr12:35310956-35310521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
107, 122
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr12:9710487-9710043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr12:16605929-16605504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
280, 96
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr12:18421209-18420759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr12:20777212-20776766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 16
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr12:41083783-41084207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr12:30745430-30745878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 160
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr12:17079975-17080430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr12:15358045-15358508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 338
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr12:19508855-19508399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 208
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr12:26782598-26783039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 186
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr12:43788747-43789191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 168
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr12:19502703-19502246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 182
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr12:25561087-25561544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 150
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr12:7884938-7884505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
209, 39
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr12:18388565-18388114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 174
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr12:34148634-34148165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr12:18123404-18123841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr12:36012891-36012435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
179, 18
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr12:25805393-25804963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 176
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr12:29969293-29969639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr12:29995744-29995385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr12:29411770-29411417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr12:27563119-27562693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
86, 222
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr12:42879425-42879850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr12:9482581-9482140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
2-437
               

               
Cow position:
               
chr12:42160839-42160392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 213
               

               
Conread position:
               
2-459
               

               
Cow position:
               
chr12:42602522-42602052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 154
               

               
Conread position:
               
3-163
               

               
Cow position:
               
chr12:12976467-12976296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr12:19154891-19154716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr12:8869163-8868822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
60, 286
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr12:27803329-27802975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr12:31959613-31959970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr12:3510285-3510654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr12:25320643-25321035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 246
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr12:40910570-40910123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
5-181
               

               
Cow position:
               
chr12:1848817-1848635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr12:17007918-17008140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr12:45814543-45814301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr12:43942200-43942594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr12:17031342-17031772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 64
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr12:34473894-34473445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
178, 69
               

               
Conread position:
               
5-437
               

               
Cow position:
               
chr12:15429879-15429426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 342
               

               
Conread position:
               
5-438
               

               
Cow position:
               
chr12:11056597-11057032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 152
               

               
Conread position:
               
6-208
               

               
Cow position:
               
chr12:10461728-10461929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr12:44846115-44846373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr12:42167368-42167705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr12:11109492-11109757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
7-434
               

               
Cow position:
               
chr12:44622082-44622525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
8-283
               

               
Cow position:
               
chr12:6164305-6164013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr12:1006108-1005668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
9-181
               

               
Cow position:
               
chr12:3880531-3880353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr12:30805584-30805949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
172, 82
               

               
Conread position:
               
11-267
               

               
Cow position:
               
chr12:26317186-26317458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr12:34673603-34673290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
11-342
               

               
Cow position:
               
chr12:39465305-39465654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 172
               

               
Conread position:
               
11-388
               

               
Cow position:
               
chr12:33323772-33323378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
87, 332
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr12:37770602-37771027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 323
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr12:39486156-39486592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 171
               

               
Conread position:
               
11-435
               

               
Cow position:
               
chr12:6720047-6720512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chr12:40158512-40158339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
12-453
               

               
Cow position:
               
chr12:21393433-21393891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
13-231
               

               
Cow position:
               
chr12:28650683-28650907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
13-284
               

               
Cow position:
               
chr12:8710560-8710830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 90
               

               
Conread position:
               
13-285
               

               
Cow position:
               
chr12:3579008-3579298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 251
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr12:17000987-17001334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
14-350
               

               
Cow position:
               
chr12:25177864-25177517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
15-270
               

               
Cow position:
               
chr12:19372373-19372111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
17-416
               

               
Cow position:
               
chr12:15122069-15122469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
19-420
               

               
Cow position:
               
chr12:42283102-42282691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 203
               

               
Conread position:
               
20-211
               

               
Cow position:
               
chr12:24107802-24107613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
21-316
               

               
Cow position:
               
chr12:46333099-46333394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
161, 23
               

               
Conread position:
               
21-449
               

               
Cow position:
               
chr12:3994686-3995111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 208
               

               
Conread position:
               
23-235
               

               
Cow position:
               
chr12:4182957-4182730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
24-348
               

               
Cow position:
               
chr12:5940083-5940423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
24-427
               

               
Cow position:
               
chr12:5635708-5635296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
26-184
               

               
Cow position:
               
chr12:43351582-43351737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
27-283
               

               
Cow position:
               
chr12:15240981-15240729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 190
               

               
Conread position:
               
31-356
               

               
Cow position:
               
chr12:29770825-29770492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
32-215
               

               
Cow position:
               
chr12:6226899-6226713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
32-341
               

               
Cow position:
               
chr12:28213266-28213583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 176
               

               
Conread position:
               
36-350
               

               
Cow position:
               
chr12:18766229-18765890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
38-420
               

               
Cow position:
               
chr12:23574524-23574918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
48-300
               

               
Cow position:
               
chr12:13156437-13156701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 170
               

               
Conread position:
               
48-338
               

               
Cow position:
               
chr12:35669702-35669402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
48-430
               

               
Cow position:
               
chr12:5459027-5459410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
51-366
               

               
Cow position:
               
chr12:27037682-27037351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
52-431
               

               
Cow position:
               
chr12:24662883-24663279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
54-277
               

               
Cow position:
               
chr12:3906238-3906476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 223
               

               
Conread position:
               
55-291
               

               
Cow position:
               
chr12:38454689-38454925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
55-353
               

               
Cow position:
               
chr12:34161188-34161498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
55-371
               

               
Cow position:
               
chr12:15162921-15163240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
51, 82
               

               
Conread position:
               
56-277
               

               
Cow position:
               
chr12:731163-730933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
56-420
               

               
Cow position:
               
chr12:28748706-28749092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 312
               

               
Conread position:
               
57-342
               

               
Cow position:
               
chr12:30210252-30210558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
59-220
               

               
Cow position:
               
chr12:44559361-44559530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
59-249
               

               
Cow position:
               
chr12:18021368-18021567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr12:38512067-38511863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 189
               

               
Conread position:
               
61-437
               

               
Cow position:
               
chr12:33129041-33129420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
63-434
               

               
Cow position:
               
chr12:31947902-31948274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
64-434
               

               
Cow position:
               
chr12:36544869-36544482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
69-416
               

               
Cow position:
               
chr12:33851140-33851500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 216
               

               
Conread position:
               
83-435
               

               
Cow position:
               
chr12:33976002-33976367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
84-424
               

               
Cow position:
               
chr12:4768726-4769071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 269
               

               
Conread position:
               
84-454
               

               
Cow position:
               
chr12:17879502-17879126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
86-437
               

               
Cow position:
               
chr12:42685140-42684770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
101-419
               

               
Cow position:
               
chr12:15703678-15703348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 253
               

               
Conread position:
               
105-434
               

               
Cow position:
               
chr12:38774417-38774083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
105-449
               

               
Cow position:
               
chr12:12637365-12637007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
105-482
               

               
Cow position:
               
chr12:15089337-15089726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 204
               

               
Conread position:
               
107-360
               

               
Cow position:
               
chr12:6485382-6485121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
108-343
               

               
Cow position:
               
chr12:19507458-19507712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
121-420
               

               
Cow position:
               
chr12:22485652-22485961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
121-434
               

               
Cow position:
               
chr12:37170104-37169787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 231
               

               
Conread position:
               
124-430
               

               
Cow position:
               
chr12:24032343-24032647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
125-453
               

               
Cow position:
               
chr12:15050774-15050441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 126
               

               
Conread position:
               
125-460
               

               
Cow position:
               
chr12:12300764-12301120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
126-420
               

               
Cow position:
               
chr12:46120986-46120668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
127-457
               

               
Cow position:
               
chr12:7902955-7902623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
136-481
               

               
Cow position:
               
chr12:9767020-9766671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
141-434
               

               
Cow position:
               
chr12:7110059-7110373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
151-446
               

               
Cow position:
               
chr12:10942154-10942467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
158-416
               

               
Cow position:
               
chr12:19261074-19261339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
173-470
               

               
Cow position:
               
chr12:29358153-29357861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
247, 51
               

               
Conread position:
               
181-414
               

               
Cow position:
               
chr12:24043266-24043014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
181-448
               

               
Cow position:
               
chr12:18583091-18582825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
189-434
               

               
Cow position:
               
chr12:5554426-5554174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
30, 163
               

               
Conread position:
               
198-377
               

               
Cow position:
               
chr12:45092367-45092554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
11, 150
               

               
Conread position:
               
198-454
               

               
Cow position:
               
chr12:11659851-11660106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
198-483
               

               
Cow position:
               
chr12:5839733-5839454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 151
               

               
Conread position:
               
200-430
               

               
Cow position:
               
chr12:17252272-17252044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
201-427
               

               
Cow position:
               
chr12:33948828-33949056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 147
               

               
Conread position:
               
201-438
               

               
Cow position:
               
chr12:12232810-12233045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 144
               

               
Conread position:
               
203-419
               

               
Cow position:
               
chr12:26777260-26777047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 141
               

               
Conread position:
               
215-449
               

               
Cow position:
               
chr12:24437694-24437455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 130
               

               
Conread position:
               
221-447
               

               
Cow position:
               
chr12:36261636-36261869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 155
               

               
Conread position:
               
229-451
               

               
Cow position:
               
chr12:14986704-14986927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
239-453
               

               
Cow position:
               
chr12:2964015-2964226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
280-460
               

               
Cow position:
               
chr12:583497-583314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
285-434
               

               
Cow position:
               
chr12:38165523-38165379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
287-447
               

               
Cow position:
               
chr12:4014413-4014249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
288-434
               

               
Cow position:
               
chr12:2835424-2835568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 41
               
Show alignments to all cow chromosomes.