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Cow genome map

           
Conread name:
           
Mixn-0006h23
        

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:50681579-50681752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr13:21155259-21155439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:3003677-3003494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr13:61170486-61170670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr13:15740296-15740111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr13:17994156-17993977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 91
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr13:38485060-38484879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr13:54381705-54381921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:52010356-52010564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:15172177-15172401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:23199438-23199213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:1959239-1959018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 149
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr13:54331249-54331025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 174
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr13:24060121-24060343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr13:38562174-38561926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr13:51108719-51108476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr13:21210092-21209848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 217
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:889949-890199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
110, 78
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:25261577-25261840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 161
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr13:54093970-54093716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 103
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr13:38012591-38012324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr13:17816001-17815740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
95, 216
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr13:12682311-12682585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr13:1011562-1011287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
87, 185
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:20683176-20682903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:52922318-52922049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr13:25062640-25062362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 186
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr13:12614490-12614200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr13:17613576-17613289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:18244086-18243806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
132, 99
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr13:34941427-34941707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
182, 19
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:24376720-24376434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr13:8838764-8839052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
105, 178
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr13:60599712-60599993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 103
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:20440373-20440644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
207, 20
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:50690162-50690463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 256
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:30693931-30693648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 97
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr13:19426468-19426763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
166, 228
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:17622514-17622186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr13:6060778-6061121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr13:15884784-15885135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr13:18835416-18835082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 96
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:8524391-8524743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:12207273-12206920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
105, 218
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:15167048-15166690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:21176094-21176447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:37484040-37484408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:47963971-47964306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr13:53566826-53566473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:10928760-10929117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 165
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:16343916-16343565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:25434899-25435252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
181, 85
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:31814098-31813748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:13176879-13176518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:48037850-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr13:19178506-19178131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
105, 353
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr13:20705973-20706347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr13:4553029-4552674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr13:43184642-43185021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr13:2414255-2413883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr13:23856445-23856065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr13:12546677-12547057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:56154931-56155305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr13:25547363-25547747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:14544352-14543966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
87, 241
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr13:20666158-20666563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:11260482-11260084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
126, 24
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr13:13261238-13260795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 370
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr13:971668-972096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 87
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr13:19610349-19610763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:311660-311232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 266
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:8362516-8362947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 188
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:17021490-17021926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 256
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:19393517-19393096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 87
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:20820611-20821037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:21287860-21288285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 105
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:27525032-27525459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:46525213-46525629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:33352137-33352566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 120
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr13:15869349-15868906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr13:26261564-26261997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 223
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr13:11808772-11808374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr13:35659983-35659543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr13:24369815-24369373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 357
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr13:16015037-16014590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
89, 104
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:6974395-6973947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:7076486-7076026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
72, 164
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:12670215-12670667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:17291901-17292342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:18166960-18166517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 100
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:21107354-21106928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
164, 36
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:25817743-25817314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 82
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:33875892-33875458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
184, 131
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:34281910-34281466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 362
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:47007508-47007928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr13:57002962-57002508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
19, 258
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr13:34263143-34263592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 104
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr13:44323133-44322673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 196
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr13:23960576-23961025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 225
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr13:32283357-32282909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr13:42114251-42113798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 254
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr13:14063298-14063740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 17
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr13:17114150-17114606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr13:15041242-15041703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 251
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr13:30798951-30798481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr13:38329860-38329385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 368
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr13:61976735-61977186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:21235455-21235894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 150
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:9142512-9142036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr13:52894372-52893913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:21241862-21242307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 158
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:54702420-54701939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr13:25927022-25926549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 340
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr13:52057771-52057297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr13:10988844-10989332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr13:37980418-37980590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr13:20536729-20536510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 73
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr13:25531559-25531780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 214
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr13:46182016-46181737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr13:11061216-11060932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr13:17439537-17439908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 355
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr13:20378108-20378514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
2-437
               

               
Cow position:
               
chr13:2774354-2773898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr13:9906972-9906501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 272
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr13:22025473-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr13:35718906-35719132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr13:19555979-19555806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
133, 127
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr13:39948192-39948369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 82
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr13:57323681-57323501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr13:43194402-43194161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr13:7663202-7663478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr13:54345004-54344685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 222
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr13:6153552-6153894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr13:28683585-28683234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
174, 12
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr13:11820805-11820462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 73
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr13:56686654-56686296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 71
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr13:38283757-38284119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 209
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr13:55315962-55316339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 359
               

               
Conread position:
               
4-419
               

               
Cow position:
               
chr13:24586274-24585849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr13:41807002-41806576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
4-429
               

               
Cow position:
               
chr13:44626607-44626157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 261
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr13:20784815-20784383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 176
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr13:15234137-15233732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 13
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr13:19033774-19033341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr13:24715464-24715034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr13:30651402-30650971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr13:42200845-42200405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
4-439
               

               
Cow position:
               
chr13:55673978-55674429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 345
               

               
Conread position:
               
4-441
               

               
Cow position:
               
chr13:20880699-20881144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
4-447
               

               
Cow position:
               
chr13:20879608-20880052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
4-451
               

               
Cow position:
               
chr13:6616521-6616995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 143
               

               
Conread position:
               
4-454
               

               
Cow position:
               
chr13:6189403-6189832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 99
               

               
Conread position:
               
4-454
               

               
Cow position:
               
chr13:43480288-43479828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 336
               

               
Conread position:
               
4-460
               

               
Cow position:
               
chr13:6079192-6079642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
105, 201
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr13:36877298-36877125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr13:16292772-16292560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 199
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr13:33517698-33517966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
101, 128
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr13:5713520-5713220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
178, 81
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr13:12408058-12408469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr13:18852302-18851892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 83
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr13:44278580-44278126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 324
               

               
Conread position:
               
5-437
               

               
Cow position:
               
chr13:21276081-21275638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 154
               

               
Conread position:
               
5-437
               

               
Cow position:
               
chr13:51528220-51528656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chr13:15288700-15289149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr13:37521155-37521432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr13:17800297-17799933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 147
               

               
Conread position:
               
6-438
               

               
Cow position:
               
chr13:48251767-48252189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 94
               

               
Conread position:
               
6-450
               

               
Cow position:
               
chr13:33054170-33054604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
6-479
               

               
Cow position:
               
chr13:15192669-15193145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 91
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr13:20839792-20839436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
7-420
               

               
Cow position:
               
chr13:45022983-45023423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 191
               

               
Conread position:
               
7-447
               

               
Cow position:
               
chr13:37818536-37818971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
8-179
               

               
Cow position:
               
chr13:60393475-60393651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr13:6975567-6975770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr13:43762388-43762037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
8-445
               

               
Cow position:
               
chr13:52199312-52198881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
8-458
               

               
Cow position:
               
chr13:7059698-7059217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 258
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr13:9593727-9593384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr13:45073713-45074036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
165, 66
               

               
Conread position:
               
9-397
               

               
Cow position:
               
chr13:23479251-23478851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
10-181
               

               
Cow position:
               
chr13:51821671-51821842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
10-181
               

               
Cow position:
               
chr13:60690501-60690679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr13:47216031-47216253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
91, 107
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr13:562917-563158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
10-256
               

               
Cow position:
               
chr13:18215647-18215409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr13:60329971-60329706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
147, 92
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr13:59687658-59687934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
10-286
               

               
Cow position:
               
chr13:37795655-37795393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
10-368
               

               
Cow position:
               
chr13:4664641-4665010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 128
               

               
Conread position:
               
10-419
               

               
Cow position:
               
chr13:13320997-13320598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 36
               

               
Conread position:
               
10-434
               

               
Cow position:
               
chr13:35525996-35526408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 88
               

               
Conread position:
               
10-450
               

               
Cow position:
               
chr13:5263065-5263506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
10-450
               

               
Cow position:
               
chr13:17745460-17745028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 324
               

               
Conread position:
               
10-450
               

               
Cow position:
               
chr13:20679566-20679087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
11-161
               

               
Cow position:
               
chr13:43839325-43839482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 152
               

               
Conread position:
               
11-181
               

               
Cow position:
               
chr13:21904882-21904711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr13:41253835-41253565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
171, 32
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr13:12202585-12202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
11-337
               

               
Cow position:
               
chr13:57493963-57494312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 188
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr13:19882815-19883249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr13:11460844-11460496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 145
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr13:18172559-18172190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 338
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr13:17821040-17821462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 311
               

               
Conread position:
               
12-448
               

               
Cow position:
               
chr13:57475200-57475644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
13-412
               

               
Cow position:
               
chr13:12283056-12282644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 214
               

               
Conread position:
               
14-358
               

               
Cow position:
               
chr13:51940948-51940590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
14-459
               

               
Cow position:
               
chr13:26098362-26097944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
92, 139
               

               
Conread position:
               
15-420
               

               
Cow position:
               
chr13:37804095-37803679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
17-414
               

               
Cow position:
               
chr13:51014966-51015378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
17-430
               

               
Cow position:
               
chr13:15257164-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
18-434
               

               
Cow position:
               
chr13:19022491-19022049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 61
               

               
Conread position:
               
18-437
               

               
Cow position:
               
chr13:15162452-15162853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
19-327
               

               
Cow position:
               
chr13:15528819-15529150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
22-454
               

               
Cow position:
               
chr13:152160-151736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
24-420
               

               
Cow position:
               
chr13:48598111-48597709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
106, 74
               

               
Conread position:
               
25-451
               

               
Cow position:
               
chr13:46112173-46111737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 81
               

               
Conread position:
               
26-437
               

               
Cow position:
               
chr13:22085546-22085949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
27-454
               

               
Cow position:
               
chr13:19223853-19223419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
61, 252
               

               
Conread position:
               
32-267
               

               
Cow position:
               
chr13:20509931-20509697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 185
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr13:23512558-23512314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
32-354
               

               
Cow position:
               
chr13:61990135-61990462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 229
               

               
Conread position:
               
32-411
               

               
Cow position:
               
chr13:24230412-24230018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 192
               

               
Conread position:
               
36-420
               

               
Cow position:
               
chr13:48165234-48165623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
46-343
               

               
Cow position:
               
chr13:53574153-53573841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr13:12618926-12619171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
48-420
               

               
Cow position:
               
chr13:47186407-47186030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
48-424
               

               
Cow position:
               
chr13:49503345-49503742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
48-448
               

               
Cow position:
               
chr13:55583382-55582967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 236
               

               
Conread position:
               
49-459
               

               
Cow position:
               
chr13:5671419-5671822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
54-236
               

               
Cow position:
               
chr13:36346148-36345956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
55-316
               

               
Cow position:
               
chr13:2404919-2404652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
55-420
               

               
Cow position:
               
chr13:607085-607463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
55-420
               

               
Cow position:
               
chr13:17338610-17338225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
55-448
               

               
Cow position:
               
chr13:5758169-5758558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
55-451
               

               
Cow position:
               
chr13:19188480-19188083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 201
               

               
Conread position:
               
56-502
               

               
Cow position:
               
chr13:14016390-14016844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 195
               

               
Conread position:
               
59-437
               

               
Cow position:
               
chr13:20473515-20473895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
61-205
               

               
Cow position:
               
chr13:7790184-7790036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
61-273
               

               
Cow position:
               
chr13:4420517-4420290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
62-437
               

               
Cow position:
               
chr13:29831265-29831644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
66-334
               

               
Cow position:
               
chr13:15903182-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
70-449
               

               
Cow position:
               
chr13:54583037-54582645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
79-454
               

               
Cow position:
               
chr13:45594055-45593688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 136
               

               
Conread position:
               
83-495
               

               
Cow position:
               
chr13:60375342-60375763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
99, 287
               

               
Conread position:
               
84-420
               

               
Cow position:
               
chr13:26698350-26698697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
19, 279
               

               
Conread position:
               
84-427
               

               
Cow position:
               
chr13:54388874-54389224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 271
               

               
Conread position:
               
84-437
               

               
Cow position:
               
chr13:17568952-17569315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 186
               

               
Conread position:
               
84-460
               

               
Cow position:
               
chr13:18696989-18696582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
85-424
               

               
Cow position:
               
chr13:8374626-8374965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
21, 211
               

               
Conread position:
               
86-336
               

               
Cow position:
               
chr13:17966064-17966331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
20, 261
               

               
Conread position:
               
86-450
               

               
Cow position:
               
chr13:18058104-18058479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
88-363
               

               
Cow position:
               
chr13:11381579-11381871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 282
               

               
Conread position:
               
88-437
               

               
Cow position:
               
chr13:20360413-20360058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
93-424
               

               
Cow position:
               
chr13:20288467-20288133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 255
               

               
Conread position:
               
94-276
               

               
Cow position:
               
chr13:10098854-10099043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
105-356
               

               
Cow position:
               
chr13:51115904-51116167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
105-357
               

               
Cow position:
               
chr13:6389504-6389255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 134
               

               
Conread position:
               
105-420
               

               
Cow position:
               
chr13:20217264-20217598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
31, 264
               

               
Conread position:
               
106-457
               

               
Cow position:
               
chr13:49205099-49204774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
319, 49
               

               
Conread position:
               
108-324
               

               
Cow position:
               
chr13:34555711-34555938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
110-437
               

               
Cow position:
               
chr13:14576325-14575998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
110-437
               

               
Cow position:
               
chr13:15194613-15194939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 188
               

               
Conread position:
               
111-459
               

               
Cow position:
               
chr13:21135782-21136149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
71, 361
               

               
Conread position:
               
114-420
               

               
Cow position:
               
chr13:46329489-46329803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
115-273
               

               
Cow position:
               
chr13:32826342-32826510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
120-430
               

               
Cow position:
               
chr13:19279200-19278885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
120-434
               

               
Cow position:
               
chr13:14967106-14967429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 205
               

               
Conread position:
               
121-356
               

               
Cow position:
               
chr13:19320643-19320390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
121-424
               

               
Cow position:
               
chr13:20534990-20534696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
124-420
               

               
Cow position:
               
chr13:12974907-12974615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
126-358
               

               
Cow position:
               
chr13:47022462-47022221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
126-437
               

               
Cow position:
               
chr13:10221048-10220740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
126-462
               

               
Cow position:
               
chr13:16038191-16038525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
129-356
               

               
Cow position:
               
chr13:50568317-50568546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
130-443
               

               
Cow position:
               
chr13:36877150-36876844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
140-454
               

               
Cow position:
               
chr13:52477557-52477879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
147-448
               

               
Cow position:
               
chr13:13196323-13196013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 210
               

               
Conread position:
               
156-424
               

               
Cow position:
               
chr13:21171501-21171776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 195
               

               
Conread position:
               
163-448
               

               
Cow position:
               
chr13:15239454-15239740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
165-420
               

               
Cow position:
               
chr13:20314555-20314825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 193
               

               
Conread position:
               
168-420
               

               
Cow position:
               
chr13:18197546-18197808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
169-450
               

               
Cow position:
               
chr13:11103131-11103438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
187-437
               

               
Cow position:
               
chr13:45439558-45439315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
191-420
               

               
Cow position:
               
chr13:55494494-55494719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
191-448
               

               
Cow position:
               
chr13:28440509-28440762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
198-458
               

               
Cow position:
               
chr13:15083681-15083424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
199-427
               

               
Cow position:
               
chr13:35557089-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 153
               

               
Conread position:
               
207-434
               

               
Cow position:
               
chr13:37621345-37621591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
221-434
               

               
Cow position:
               
chr13:8450330-8450118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
234-448
               

               
Cow position:
               
chr13:53850811-53850587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
235-434
               

               
Cow position:
               
chr13:33854698-33854895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
280-437
               

               
Cow position:
               
chr13:23478836-23478680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 58
               

               
Conread position:
               
282-456
               

               
Cow position:
               
chr13:53619936-53619766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               
Show alignments to all cow chromosomes.