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Cow genome map

           
Conread name:
           
Mixn-0006h23
        

               
Conread position:
               
1-152
               

               
Cow position:
               
chr14:19106162-19106006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr14:36775888-36775730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:11641287-11641465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:19193730-19193912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:20932906-20932719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:25231361-25231540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:39518983-39518799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:44237412-44237601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr14:37108623-37108809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr14:25695668-25695475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
105, 79
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr14:40346890-40347071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
181, 61
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:37640520-37640323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 89
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr14:46735600-46735386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr14:38379308-38379087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr14:19633470-19633234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 214
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr14:27312712-27312473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr14:24581211-24580957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr14:3878740-3878487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
108, 153
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr14:11819836-11820102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr14:49563381-49563657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
181, 95
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr14:22967039-22966757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:3564561-3564285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:43249873-43249589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 191
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr14:24894048-24893768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
87, 189
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr14:40269558-40269841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr14:43452892-43453180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 210
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:27791818-27791540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 182
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr14:8848536-8848221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr14:40034258-40033933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
107, 87
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr14:8784463-8784138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr14:48412589-48412945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr14:34082868-34083229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr14:35018468-35018818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 184
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:39779041-39778685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 164
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr14:5836192-5835844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 182
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr14:43036166-43035832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
108, 93
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr14:39774767-39775119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 105
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr14:9308513-9308160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 152
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr14:25385604-25385957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:38355471-38355116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr14:43046432-43046082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr14:5630451-5630078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 363
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr14:3195139-3194781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr14:33751799-33751451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 78
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr14:42596665-42596313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr14:45605377-45605009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr14:38337863-38338224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr14:15054700-15055089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr14:37131946-37131544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 352
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr14:48740598-48740997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
182, 48
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr14:8102066-8101659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr14:21357840-21357418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 221
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr14:24922394-24921959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 335
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr14:23090090-23090524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 334
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr14:42330642-42330203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:27848488-27848035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 372
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:33714400-33714818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 95
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:44742099-44742516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr14:48427364-48426928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 369
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr14:26116351-26115914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:45052726-45052290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
96, 103
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr14:19189327-19188899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 184
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr14:24981743-24981298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:1716022-1715567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:20666737-20667163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:22989322-22988877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 260
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:35381876-35381431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
105, 87
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:41749476-41749914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 28
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr14:45677511-45677073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr14:19207152-19206703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
87, 185
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr14:17013796-17013347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr14:18309023-18309473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
181, 15
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr14:20016419-20016882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
105, 78
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr14:24237106-24236646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr14:40230349-40230807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 202
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr14:18345443-18345896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr14:18941016-18941459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 133
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr14:26620907-26620450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 257
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr14:11507955-11508413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
87, 155
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr14:10078545-10078078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr14:26442050-26442527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr14:44557548-44557998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr14:28304498-28304965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr14:18484953-18485434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 266
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr14:20010023-20010494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 253
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr14:17755847-17755388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
10, 104
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr14:28987979-28987498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr14:6599666-6600150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr14:42918377-42918193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 182
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr14:8964830-8964565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 158
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr14:36554864-36555216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
15, 278
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr14:21964407-21964063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
102, 206
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr14:23682550-23682127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr14:9029396-9029844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
3-163
               

               
Cow position:
               
chr14:21534754-21534912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
3-439
               

               
Cow position:
               
chr14:33791475-33791029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 322
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr14:46965843-46965664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr14:28098136-28097966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr14:33538640-33538845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr14:8495438-8495196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr14:30926990-30926746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr14:7482340-7482072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr14:38168968-38168693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr14:33326110-33326401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr14:33828434-33828142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr14:39769946-39770291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
4-339
               

               
Cow position:
               
chr14:25403659-25404003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
199, 115
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr14:38921222-38920881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
178, 12
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr14:24417169-24416801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr14:11810285-11810704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr14:34199557-34200003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 228
               

               
Conread position:
               
4-437
               

               
Cow position:
               
chr14:13385658-13385205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
4-438
               

               
Cow position:
               
chr14:33247153-33247582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 75
               

               
Conread position:
               
4-453
               

               
Cow position:
               
chr14:35498216-35498671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
82, 106
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr14:41479375-41479661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr14:42154677-42155142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 349
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr14:19624373-19624148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
6-338
               

               
Cow position:
               
chr14:35544232-35544571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 178
               

               
Conread position:
               
6-416
               

               
Cow position:
               
chr14:39433977-39434394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr14:26432958-26433393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 152
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr14:48492502-48492960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr14:14466197-14466634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr14:34096313-34096656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
270, 99
               

               
Conread position:
               
8-214
               

               
Cow position:
               
chr14:34355421-34355625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 37
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr14:37884130-37884409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 219
               

               
Conread position:
               
8-437
               

               
Cow position:
               
chr14:36289535-36289951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr14:15033036-15032769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
10-159
               

               
Cow position:
               
chr14:20736808-20736655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
69, 116
               

               
Conread position:
               
10-193
               

               
Cow position:
               
chr14:34020968-34020777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr14:17397326-17397545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 181
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr14:32452535-32452251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr14:17841008-17841363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr14:29632604-29632960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 232
               

               
Conread position:
               
10-355
               

               
Cow position:
               
chr14:41211135-41210771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 350
               

               
Conread position:
               
10-434
               

               
Cow position:
               
chr14:20640345-20640788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 268
               

               
Conread position:
               
11-289
               

               
Cow position:
               
chr14:47591641-47591927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 201
               

               
Conread position:
               
11-349
               

               
Cow position:
               
chr14:24796145-24796512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 340
               

               
Conread position:
               
11-433
               

               
Cow position:
               
chr14:12036565-12036986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chr14:19222158-19221986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
12-277
               

               
Cow position:
               
chr14:48689807-48689530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
7, 270
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr14:11043211-11043638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
10, 179
               

               
Conread position:
               
13-235
               

               
Cow position:
               
chr14:49086581-49086349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
13-403
               

               
Cow position:
               
chr14:41128169-41127779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
14-175
               

               
Cow position:
               
chr14:47036525-47036688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
14-364
               

               
Cow position:
               
chr14:8750349-8749984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
17-198
               

               
Cow position:
               
chr14:12484032-12484215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
21-420
               

               
Cow position:
               
chr14:49824360-49824757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
22-334
               

               
Cow position:
               
chr14:19372610-19372276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chr14:50040506-50040304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
25-437
               

               
Cow position:
               
chr14:13846250-13845827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 201
               

               
Conread position:
               
26-353
               

               
Cow position:
               
chr14:40433184-40432843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
27-391
               

               
Cow position:
               
chr14:33309248-33309625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
32-175
               

               
Cow position:
               
chr14:28004237-28004087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
32-336
               

               
Cow position:
               
chr14:40165678-40165360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
32-348
               

               
Cow position:
               
chr14:34984121-34983792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
32-355
               

               
Cow position:
               
chr14:24387708-24387357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
32-416
               

               
Cow position:
               
chr14:1645932-1646324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 177
               

               
Conread position:
               
32-434
               

               
Cow position:
               
chr14:28114926-28115351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 294
               

               
Conread position:
               
34-364
               

               
Cow position:
               
chr14:27591700-27592049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 100
               

               
Conread position:
               
34-376
               

               
Cow position:
               
chr14:6175838-6175494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
37-434
               

               
Cow position:
               
chr14:10721483-10721861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 44
               

               
Conread position:
               
38-260
               

               
Cow position:
               
chr14:20483216-20483440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 33
               

               
Conread position:
               
38-359
               

               
Cow position:
               
chr14:1977828-1978163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
40-463
               

               
Cow position:
               
chr14:27919489-27919922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr14:3162939-3162695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
161, 31
               

               
Conread position:
               
48-416
               

               
Cow position:
               
chr14:20110479-20110861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 310
               

               
Conread position:
               
48-420
               

               
Cow position:
               
chr14:16760640-16760255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 136
               

               
Conread position:
               
48-434
               

               
Cow position:
               
chr14:13043002-13042600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 313
               

               
Conread position:
               
49-388
               

               
Cow position:
               
chr14:37447237-37447580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
55-211
               

               
Cow position:
               
chr14:22952764-22952922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
55-263
               

               
Cow position:
               
chr14:33643557-33643765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
57-451
               

               
Cow position:
               
chr14:14948978-14949387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 278
               

               
Conread position:
               
60-263
               

               
Cow position:
               
chr14:14581094-14580884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
63-434
               

               
Cow position:
               
chr14:20826698-20826332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
69-434
               

               
Cow position:
               
chr14:25986740-25986353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 265
               

               
Conread position:
               
73-433
               

               
Cow position:
               
chr14:38747878-38747521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
74-360
               

               
Cow position:
               
chr14:33830511-33830213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
76-420
               

               
Cow position:
               
chr14:16549791-16550138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 270
               

               
Conread position:
               
82-362
               

               
Cow position:
               
chr14:36254502-36254787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
84-337
               

               
Cow position:
               
chr14:15997563-15997831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
84-449
               

               
Cow position:
               
chr14:16256970-16256603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 194
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr14:10630935-10631205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
105-424
               

               
Cow position:
               
chr14:48838776-48838443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
77, 257
               

               
Conread position:
               
105-434
               

               
Cow position:
               
chr14:15492777-15492433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
68, 311
               

               
Conread position:
               
105-448
               

               
Cow position:
               
chr14:24608147-24607794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
77, 227
               

               
Conread position:
               
107-434
               

               
Cow position:
               
chr14:21933162-21933503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 240
               

               
Conread position:
               
110-448
               

               
Cow position:
               
chr14:33341934-33341580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 226
               

               
Conread position:
               
111-424
               

               
Cow position:
               
chr14:12511726-12512039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
121-420
               

               
Cow position:
               
chr14:23080599-23080898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 159
               

               
Conread position:
               
122-429
               

               
Cow position:
               
chr14:33300869-33300539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 204
               

               
Conread position:
               
136-336
               

               
Cow position:
               
chr14:29698208-29698426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
140-415
               

               
Cow position:
               
chr14:24945345-24945633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 216
               

               
Conread position:
               
181-456
               

               
Cow position:
               
chr14:7636393-7636681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 179
               

               
Conread position:
               
182-419
               

               
Cow position:
               
chr14:25228239-25228004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 162
               

               
Conread position:
               
193-437
               

               
Cow position:
               
chr14:4848431-4848186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
194-420
               

               
Cow position:
               
chr14:16524557-16524325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 225
               

               
Conread position:
               
198-437
               

               
Cow position:
               
chr14:13731018-13731257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
198-449
               

               
Cow position:
               
chr14:41486182-41486442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
200-434
               

               
Cow position:
               
chr14:43868387-43868147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
200-460
               

               
Cow position:
               
chr14:25225805-25225551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
201-434
               

               
Cow position:
               
chr14:21224715-21224487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
202-415
               

               
Cow position:
               
chr14:40191663-40191455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
202-434
               

               
Cow position:
               
chr14:12033165-12033406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
202-448
               

               
Cow position:
               
chr14:29734288-29734531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
210-430
               

               
Cow position:
               
chr14:10706943-10706723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
212-448
               

               
Cow position:
               
chr14:18302027-18301784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
280-420
               

               
Cow position:
               
chr14:32784124-32784262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
280-448
               

               
Cow position:
               
chr14:47224374-47224541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 143
               
Show alignments to all cow chromosomes.