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Cow genome map

           
Conread name:
           
Mixn-0006h23
        

               
Conread position:
               
1-153
               

               
Cow position:
               
chr17:8644833-8644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr17:21039074-21039235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr17:23680780-23680941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr17:1359001-1358828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr17:24876934-24877115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr17:5224199-5224374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr17:25078197-25078028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr17:21710301-21710481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr17:1020771-1020583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr17:3182788-3182606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr17:21874520-21874328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 67
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr17:23337218-23337038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr17:27667398-27667210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr17:34316912-34316715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr17:30999572-30999761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:1061266-1061052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr17:2079556-2079770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr17:17951039-17951251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 134
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr17:21628278-21628500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
130, 93
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:32651412-32651646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr17:10649645-10649867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr17:44924379-44924155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
184, 70
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr17:16307176-16307411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
152, 213
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr17:12216281-12216033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 222
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr17:27765077-27765341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr17:33291014-33290741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr17:20835389-20835653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 215
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr17:6624054-6624334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr17:20839762-20839488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr17:21243990-21243709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr17:21335902-21335610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 258
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr17:37163731-37163438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr17:38646864-38647154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr17:1275315-1275639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
58, 256
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr17:11101998-11101685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 93
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr17:7760667-7760325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 140
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr17:5000778-5000439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr17:27142552-27142894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 190
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr17:13143894-13143549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 226
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr17:24580503-24580136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr17:26764810-26765183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr17:39735982-39736336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr17:1410445-1410071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr17:18592235-18592609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 170
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr17:33792978-33793329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
167, 96
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr17:38832838-38833209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr17:8079113-8079480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr17:35126510-35126879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 68
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr17:17405934-17406309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr17:9117439-9117818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 354
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr17:5767710-5768084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 180
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr17:11832340-11831932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr17:23246008-23246378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr17:25097259-25097645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr17:30665069-30665464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr17:18109290-18108883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 338
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr17:18472975-18473380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:21115152-21114732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 69
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:33052659-33053077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:40741443-40741877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
101, 339
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:41290221-41289821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr17:5423275-5422851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr17:10446712-10447140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 136
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr17:24004190-24004600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
210, 74
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr17:36331170-36330740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr17:27795444-27795884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr17:4225695-4225255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 87
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr17:11216087-11215662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr17:20022721-20022283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 364
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr17:26230736-26231196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr17:23101415-23100984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 141
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr17:13922269-13922722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 286
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr17:17059236-17059659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:1035808-1035352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:11618376-11618828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 120
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:14026119-14025665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:21293249-21292797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:21739088-21738623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:24973746-24974185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:25128553-25128112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:25608710-25608276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 246
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:29715390-29714972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 149
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:32989289-32989714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 18
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:32993817-32993386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 18
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr17:40331565-40332023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr17:18490329-18490777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr17:20033120-20032664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 256
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr17:33288858-33288413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 141
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr17:15664465-15664921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr17:13940526-13940063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
85, 362
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr17:20800612-20801067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
74, 108
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr17:32027666-32027191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
87, 261
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr17:32419322-32418864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 356
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr17:26818656-26818217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr17:18201570-18202020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr17:25900995-25901473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr17:6423557-6424014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr17:25815404-25815855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr17:15103092-15102625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr17:40771626-40772095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
73, 280
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr17:21313008-21312768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
180, 107
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr17:12059293-12059034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 14
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr17:34595737-34596012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr17:31231317-31231012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr17:5006694-5006339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr17:22806741-22806389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
2-358
               

               
Cow position:
               
chr17:24077201-24077569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr17:43717513-43717113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr17:11397463-11397919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr17:9175884-9175675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr17:3471220-3471489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr17:24549971-24550248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr17:3306667-3306930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr17:3781843-3782172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr17:11156694-11156338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr17:30718620-30718255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
98, 340
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr17:32273883-32273504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
4-383
               

               
Cow position:
               
chr17:18495712-18495329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
4-416
               

               
Cow position:
               
chr17:32279108-32278681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr17:7810940-7810520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 157
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr17:30713152-30713573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
4-423
               

               
Cow position:
               
chr17:12325947-12325540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
4-433
               

               
Cow position:
               
chr17:21004032-21003590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 325
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr17:20157416-20157850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
4-447
               

               
Cow position:
               
chr17:13244227-13243799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 39
               

               
Conread position:
               
4-448
               

               
Cow position:
               
chr17:21959880-21959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
4-449
               

               
Cow position:
               
chr17:24553803-24554278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 214
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr17:32366085-32366353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr17:24883764-24883328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
5-448
               

               
Cow position:
               
chr17:24587418-24587879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 356
               

               
Conread position:
               
5-448
               

               
Cow position:
               
chr17:32138600-32138159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
5-451
               

               
Cow position:
               
chr17:32471991-32471531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
6-181
               

               
Cow position:
               
chr17:21412446-21412267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
6-208
               

               
Cow position:
               
chr17:27305960-27306167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr17:21434928-21434501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr17:11361985-11362399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr17:24787219-24786802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
7-451
               

               
Cow position:
               
chr17:24490323-24490800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 338
               

               
Conread position:
               
7-455
               

               
Cow position:
               
chr17:21599880-21599420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
7-460
               

               
Cow position:
               
chr17:38614758-38615231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
101, 250
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr17:15333908-15333626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
8-341
               

               
Cow position:
               
chr17:10459133-10458779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
8-356
               

               
Cow position:
               
chr17:9911566-9911923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 160
               

               
Conread position:
               
9-434
               

               
Cow position:
               
chr17:33933933-33933507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 70
               

               
Conread position:
               
9-446
               

               
Cow position:
               
chr17:24824056-24824499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 98
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr17:4436426-4436224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
96, 107
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr17:37482274-37481987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
10-289
               

               
Cow position:
               
chr17:43141911-43141613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr17:17060877-17060583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
10-328
               

               
Cow position:
               
chr17:3503390-3503721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
10-336
               

               
Cow position:
               
chr17:30539442-30539122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr17:12447593-12447179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
10-433
               

               
Cow position:
               
chr17:17222147-17222584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 351
               

               
Conread position:
               
10-433
               

               
Cow position:
               
chr17:20072270-20071862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
10-437
               

               
Cow position:
               
chr17:25999921-26000363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 100
               

               
Conread position:
               
11-175
               

               
Cow position:
               
chr17:3518446-3518280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
11-301
               

               
Cow position:
               
chr17:5688542-5688253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr17:40289198-40288825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 348
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr17:3388666-3389076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
264, 59
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr17:11278226-11277786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr17:25189085-25189533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
103, 90
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr17:37480186-37479881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 238
               

               
Conread position:
               
12-416
               

               
Cow position:
               
chr17:4601741-4601338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 291
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr17:28285220-28284809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
13-263
               

               
Cow position:
               
chr17:24761418-24761160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
13-434
               

               
Cow position:
               
chr17:21973325-21972884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 345
               

               
Conread position:
               
13-452
               

               
Cow position:
               
chr17:11664783-11664322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
14-420
               

               
Cow position:
               
chr17:24773492-24773903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 219
               

               
Conread position:
               
14-447
               

               
Cow position:
               
chr17:29084012-29084420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
261, 48
               

               
Conread position:
               
15-236
               

               
Cow position:
               
chr17:33926316-33926090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
15-426
               

               
Cow position:
               
chr17:12536658-12536241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 287
               

               
Conread position:
               
16-259
               

               
Cow position:
               
chr17:34208009-34207751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
17-232
               

               
Cow position:
               
chr17:4824306-4824526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
17-433
               

               
Cow position:
               
chr17:25611905-25612327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
17-434
               

               
Cow position:
               
chr17:908558-908980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 105
               

               
Conread position:
               
19-457
               

               
Cow position:
               
chr17:36454950-36454512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
21-437
               

               
Cow position:
               
chr17:3202585-3202167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
23-350
               

               
Cow position:
               
chr17:3577356-3577703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 161
               

               
Conread position:
               
23-394
               

               
Cow position:
               
chr17:36203672-36203282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
25-387
               

               
Cow position:
               
chr17:29157238-29157612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
26-231
               

               
Cow position:
               
chr17:3442847-3442642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
31-350
               

               
Cow position:
               
chr17:20990368-20990030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 225
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr17:36268223-36268435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 75
               

               
Conread position:
               
32-348
               

               
Cow position:
               
chr17:12590990-12591334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
33-431
               

               
Cow position:
               
chr17:1634654-1634254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 18
               

               
Conread position:
               
34-356
               

               
Cow position:
               
chr17:15340908-15340584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 46
               

               
Conread position:
               
34-362
               

               
Cow position:
               
chr17:24821695-24822035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
75, 224
               

               
Conread position:
               
36-416
               

               
Cow position:
               
chr17:22032863-22032465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 187
               

               
Conread position:
               
38-343
               

               
Cow position:
               
chr17:38363141-38362843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
38-428
               

               
Cow position:
               
chr17:12306563-12306165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 151
               

               
Conread position:
               
39-266
               

               
Cow position:
               
chr17:10510828-10510586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
41-434
               

               
Cow position:
               
chr17:4106150-4105748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
41-434
               

               
Cow position:
               
chr17:4121886-4121483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
43-418
               

               
Cow position:
               
chr17:7142702-7143082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 243
               

               
Conread position:
               
43-420
               

               
Cow position:
               
chr17:27058715-27058322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
43-436
               

               
Cow position:
               
chr17:1562936-1562548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 175
               

               
Conread position:
               
45-454
               

               
Cow position:
               
chr17:28467976-28468386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr17:25916735-25916977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
49-316
               

               
Cow position:
               
chr17:4967954-4968240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 119
               

               
Conread position:
               
50-427
               

               
Cow position:
               
chr17:31037535-31037142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 308
               

               
Conread position:
               
51-448
               

               
Cow position:
               
chr17:9966187-9965770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 283
               

               
Conread position:
               
53-261
               

               
Cow position:
               
chr17:42259048-42259250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
53-449
               

               
Cow position:
               
chr17:24559147-24559546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
55-236
               

               
Cow position:
               
chr17:5382136-5381953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
55-423
               

               
Cow position:
               
chr17:3467619-3467981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
55-459
               

               
Cow position:
               
chr17:18146032-18146453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 401
               

               
Conread position:
               
57-434
               

               
Cow position:
               
chr17:25117742-25118128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
64-448
               

               
Cow position:
               
chr17:24928338-24928734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
70-416
               

               
Cow position:
               
chr17:32280535-32280891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
115, 5
               

               
Conread position:
               
70-437
               

               
Cow position:
               
chr17:40673252-40673617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
70-448
               

               
Cow position:
               
chr17:30728387-30728760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
75-419
               

               
Cow position:
               
chr17:1113755-1114124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 259
               

               
Conread position:
               
75-448
               

               
Cow position:
               
chr17:6318987-6318613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
76-420
               

               
Cow position:
               
chr17:27184069-27183715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 187
               

               
Conread position:
               
79-433
               

               
Cow position:
               
chr17:32348948-32349304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
79-459
               

               
Cow position:
               
chr17:20884397-20884792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
83-343
               

               
Cow position:
               
chr17:6848683-6848949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
85-340
               

               
Cow position:
               
chr17:33658190-33657917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 243
               

               
Conread position:
               
85-419
               

               
Cow position:
               
chr17:4300038-4299716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
88-337
               

               
Cow position:
               
chr17:1040629-1040893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 249
               

               
Conread position:
               
89-359
               

               
Cow position:
               
chr17:25616145-25616420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 105
               

               
Conread position:
               
89-448
               

               
Cow position:
               
chr17:21743824-21744194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 128
               

               
Conread position:
               
91-383
               

               
Cow position:
               
chr17:35339029-35338724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
105-325
               

               
Cow position:
               
chr17:23563887-23563658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
105-360
               

               
Cow position:
               
chr17:35573665-35573922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
105-420
               

               
Cow position:
               
chr17:21325235-21325571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
105-434
               

               
Cow position:
               
chr17:25514221-25513874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
105-447
               

               
Cow position:
               
chr17:14652878-14652531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 220
               

               
Conread position:
               
105-459
               

               
Cow position:
               
chr17:11912595-11912239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
108-340
               

               
Cow position:
               
chr17:27203139-27202893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
108-360
               

               
Cow position:
               
chr17:23517037-23516773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 236
               

               
Conread position:
               
114-327
               

               
Cow position:
               
chr17:11368939-11368711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
114-420
               

               
Cow position:
               
chr17:25342829-25342513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 210
               

               
Conread position:
               
120-342
               

               
Cow position:
               
chr17:21758221-21757987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
122-416
               

               
Cow position:
               
chr17:10432057-10431741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
122-434
               

               
Cow position:
               
chr17:17193413-17193731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
124-451
               

               
Cow position:
               
chr17:9824590-9824923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
57, 231
               

               
Conread position:
               
126-434
               

               
Cow position:
               
chr17:29025991-29026317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 204
               

               
Conread position:
               
128-460
               

               
Cow position:
               
chr17:36864556-36864895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
129-423
               

               
Cow position:
               
chr17:12511049-12510755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 211
               

               
Conread position:
               
132-465
               

               
Cow position:
               
chr17:3153642-3153292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
135-414
               

               
Cow position:
               
chr17:40638882-40639168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 186
               

               
Conread position:
               
135-435
               

               
Cow position:
               
chr17:22051661-22051349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 221
               

               
Conread position:
               
140-459
               

               
Cow position:
               
chr17:34791129-34790799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 203
               

               
Conread position:
               
141-446
               

               
Cow position:
               
chr17:39606367-39606675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 215
               

               
Conread position:
               
142-420
               

               
Cow position:
               
chr17:1025881-1025607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
144-419
               

               
Cow position:
               
chr17:5372588-5372306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 213
               

               
Conread position:
               
156-356
               

               
Cow position:
               
chr17:22017134-22016923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 197
               

               
Conread position:
               
156-437
               

               
Cow position:
               
chr17:21039517-21039803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
160-434
               

               
Cow position:
               
chr17:25800925-25800642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
164-465
               

               
Cow position:
               
chr17:17044372-17044064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 175
               

               
Conread position:
               
181-434
               

               
Cow position:
               
chr17:25473299-25473037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
198-355
               

               
Cow position:
               
chr17:18848155-18847989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
198-402
               

               
Cow position:
               
chr17:40276743-40276950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
198-420
               

               
Cow position:
               
chr17:21466259-21466031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 14
               

               
Conread position:
               
198-433
               

               
Cow position:
               
chr17:29995433-29995193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 160
               

               
Conread position:
               
198-487
               

               
Cow position:
               
chr17:25511247-25511538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
199-428
               

               
Cow position:
               
chr17:18934262-18934491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
200-416
               

               
Cow position:
               
chr17:21472175-21471964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
200-440
               

               
Cow position:
               
chr17:26575223-26574975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
201-434
               

               
Cow position:
               
chr17:37341031-37340789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 152
               

               
Conread position:
               
201-434
               

               
Cow position:
               
chr17:43315280-43315048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
202-436
               

               
Cow position:
               
chr17:32333085-32332846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
210-433
               

               
Cow position:
               
chr17:17034963-17035186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
211-414
               

               
Cow position:
               
chr17:42150406-42150609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 137
               

               
Conread position:
               
221-359
               

               
Cow position:
               
chr17:18109523-18109379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
58, 133
               

               
Conread position:
               
224-435
               

               
Cow position:
               
chr17:946386-946598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
240-449
               

               
Cow position:
               
chr17:21676935-21677145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
251-448
               

               
Cow position:
               
chr17:2729856-2729660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 12
               
Show alignments to all cow chromosomes.