Cow genome map

Conread name: Mixn-0006h23

Conread position: 1-163
Cow position: chr20:3502092-3502258 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 1-167
Cow position: chr20:20196943-20197105 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 65

Conread position: 1-168
Cow position: chr20:4781359-4781533 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 1-181
Cow position: chr20:23679348-23679167 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 1-181
Cow position: chr20:41977220-41977395 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 1-209
Cow position: chr20:5104636-5104428 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 20

Conread position: 1-215
Cow position: chr20:32636767-32636551 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 0

Conread position: 1-225
Cow position: chr20:10235650-10235879 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 87, 218

Conread position: 1-228
Cow position: chr20:33176980-33177221 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 109

Conread position: 1-235
Cow position: chr20:31464583-31464335 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 1-250
Cow position: chr20:9379207-9379463 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 108, 212

Conread position: 1-250
Cow position: chr20:20312939-20312690 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 181, 81

Conread position: 1-252
Cow position: chr20:15761150-15760890 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 86, 159

Conread position: 1-263
Cow position: chr20:39019494-39019766 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 15

Conread position: 1-264
Cow position: chr20:35970739-35971010 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 216

Conread position: 1-270
Cow position: chr20:41452008-41451726 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 1-273
Cow position: chr20:3331496-3331205 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 87, 261

Conread position: 1-276
Cow position: chr20:23505627-23505911 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 97, 15

Conread position: 1-277
Cow position: chr20:6501597-6501878 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 89, 221

Conread position: 1-277
Cow position: chr20:13967460-13967172 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 105, 87

Conread position: 1-294
Cow position: chr20:4205761-4206073 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 0

Conread position: 1-320
Cow position: chr20:18618437-18618753 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 105, 15

Conread position: 1-330
Cow position: chr20:7442326-7441992 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 94

Conread position: 1-337
Cow position: chr20:25686553-25686197 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 16

Conread position: 1-348
Cow position: chr20:11482341-11481975 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 83, 104

Conread position: 1-348
Cow position: chr20:38768655-38768301 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 93

Conread position: 1-348
Cow position: chr20:39517809-39518166 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 65

Conread position: 1-350
Cow position: chr20:18320999-18320630 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-354
Cow position: chr20:7756831-7756456 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 103, 130

Conread position: 1-356
Cow position: chr20:19751107-19751475 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 85, 111

Conread position: 1-357
Cow position: chr20:38817809-38818165 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 182, 15

Conread position: 1-358
Cow position: chr20:11550164-11550539 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 94

Conread position: 1-364
Cow position: chr20:5826735-5827116 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 86, 342

Conread position: 1-370
Cow position: chr20:8703108-8702738 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 105, 15

Conread position: 1-392
Cow position: chr20:20203014-20203415 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 290

Conread position: 1-417
Cow position: chr20:398496-398086 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 68

Conread position: 1-418
Cow position: chr20:40423292-40422871 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 273
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 105, 196

Conread position: 1-419
Cow position: chr20:13269423-13269842 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 1-420
Cow position: chr20:6240731-6240291 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 362

Conread position: 1-420
Cow position: chr20:12582149-12581727 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 74

Conread position: 1-424
Cow position: chr20:5998868-5998428 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 89

Conread position: 1-424
Cow position: chr20:14759866-14759441 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 283
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 287

Conread position: 1-424
Cow position: chr20:42310163-42309734 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 280
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 15

Conread position: 1-427
Cow position: chr20:13752039-13752449 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 1-431
Cow position: chr20:12996211-12995753 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 133

Conread position: 1-431
Cow position: chr20:14879584-14880027 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 139

Conread position: 1-431
Cow position: chr20:25009845-25009392 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 142

Conread position: 1-434
Cow position: chr20:3599592-3599159 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 178

Conread position: 1-434
Cow position: chr20:14572558-14572134 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 105

Conread position: 1-434
Cow position: chr20:28982496-28982942 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 1-434
Cow position: chr20:34202445-34202885 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 284
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 75, 207

Conread position: 1-434
Cow position: chr20:38486750-38486314 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 294
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 87, 153

Conread position: 1-435
Cow position: chr20:22064868-22065305 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 159

Conread position: 1-437
Cow position: chr20:13023680-13023256 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 301
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 105, 161

Conread position: 1-437
Cow position: chr20:29754584-29755024 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 127

Conread position: 1-438
Cow position: chr20:10468869-10469290 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 291
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 108, 45

Conread position: 1-448
Cow position: chr20:6258265-6257817 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 1-448
Cow position: chr20:19328198-19328655 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 297
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 105, 16

Conread position: 1-448
Cow position: chr20:32847150-32847597 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 202

Conread position: 1-450
Cow position: chr20:4945447-4944993 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 74

Conread position: 1-451
Cow position: chr20:5702543-5702979 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 173

Conread position: 1-451
Cow position: chr20:5950834-5950379 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 305
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 185, 15

Conread position: 1-451
Cow position: chr20:15549099-15548631 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 74

Conread position: 1-451
Cow position: chr20:31740417-31739954 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 38

Conread position: 1-454
Cow position: chr20:7426391-7425930 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 133

Conread position: 1-456
Cow position: chr20:14806684-14807149 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 343

Conread position: 1-472
Cow position: chr20:20983805-20984279 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 76

Conread position: 2-181
Cow position: chr20:11765807-11765627 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 51

Conread position: 2-233
Cow position: chr20:19410570-19410329 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 120

Conread position: 2-274
Cow position: chr20:33144756-33144472 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 2-277
Cow position: chr20:39377346-39377082 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 122, 92

Conread position: 2-278
Cow position: chr20:22313360-22313075 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 53

Conread position: 2-301
Cow position: chr20:8607121-8606821 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 86, 144

Conread position: 2-355
Cow position: chr20:28067626-28067255 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 104, 14

Conread position: 2-356
Cow position: chr20:38578959-38578596 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 2-385
Cow position: chr20:8429540-8429937 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 257
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 82, 321

Conread position: 2-430
Cow position: chr20:8556475-8556030 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 358

Conread position: 2-449
Cow position: chr20:7659414-7658969 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 14

Conread position: 2-450
Cow position: chr20:10208603-10209064 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 13

Conread position: 4-141
Cow position: chr20:4893096-4892961 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 102, 82

Conread position: 4-214
Cow position: chr20:14740296-14740082 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 84, 12

Conread position: 4-272
Cow position: chr20:21714552-21714835 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 73

Conread position: 4-277
Cow position: chr20:14735478-14735753 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 12

Conread position: 4-279
Cow position: chr20:35907245-35906969 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 123, 12

Conread position: 4-280
Cow position: chr20:22704089-22704382 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 0

Conread position: 4-341
Cow position: chr20:33363321-33363672 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 74

Conread position: 4-348
Cow position: chr20:6096684-6096335 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 42

Conread position: 4-364
Cow position: chr20:23065031-23064659 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 23, 141

Conread position: 4-407
Cow position: chr20:24069613-24070021 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 12

Conread position: 4-414
Cow position: chr20:12420820-12420396 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 146

Conread position: 4-416
Cow position: chr20:29844856-29845280 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 104

Conread position: 4-416
Cow position: chr20:30817338-30817746 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 102, 86

Conread position: 4-420
Cow position: chr20:28605007-28605435 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 12

Conread position: 4-457
Cow position: chr20:22235115-22235566 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 176

Conread position: 5-181
Cow position: chr20:11043695-11043522 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 93

Conread position: 5-273
Cow position: chr20:19146672-19146957 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 5-337
Cow position: chr20:19363560-19363212 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 60

Conread position: 5-344
Cow position: chr20:42459049-42458699 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 96, 16

Conread position: 5-432
Cow position: chr20:13493540-13493969 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 272
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 123, 74

Conread position: 5-437
Cow position: chr20:4756023-4755588 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 280
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 111, 58

Conread position: 6-181
Cow position: chr20:34597305-34597120 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 6-219
Cow position: chr20:8020698-8020919 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 82, 10

Conread position: 6-309
Cow position: chr20:16715203-16715515 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 123, 142

Conread position: 6-448
Cow position: chr20:41703957-41704423 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 288
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 257

Conread position: 7-175
Cow position: chr20:32069053-32068878 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 7-193
Cow position: chr20:35760475-35760665 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 89, 99

Conread position: 7-218
Cow position: chr20:26469261-26469042 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 98, 0

Conread position: 7-286
Cow position: chr20:34918083-34918356 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 72

Conread position: 7-342
Cow position: chr20:19459840-19459509 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 173, 13

Conread position: 7-420
Cow position: chr20:1640643-1640238 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 272
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 78, 168

Conread position: 7-448
Cow position: chr20:34098154-34097691 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 310
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 99, 338

Conread position: 8-277
Cow position: chr20:10884561-10884273 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 254

Conread position: 8-395
Cow position: chr20:21019370-21019769 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 65

Conread position: 8-448
Cow position: chr20:23846867-23846409 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 355

Conread position: 9-356
Cow position: chr20:35364857-35365210 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 70

Conread position: 9-414
Cow position: chr20:31746819-31746413 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 173, 63

Conread position: 9-424
Cow position: chr20:40177056-40177477 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 76

Conread position: 9-456
Cow position: chr20:27408069-27407630 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 17

Conread position: 10-181
Cow position: chr20:3781619-3781446 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 10-302
Cow position: chr20:3607147-3606845 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 57

Conread position: 10-324
Cow position: chr20:15235569-15235890 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 208

Conread position: 10-342
Cow position: chr20:6602848-6603197 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 94, 74

Conread position: 10-343
Cow position: chr20:34107923-34108262 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 93, 36

Conread position: 10-355
Cow position: chr20:11542476-11542114 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 98

Conread position: 10-420
Cow position: chr20:18423528-18423904 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 98, 142

Conread position: 10-437
Cow position: chr20:10200149-10200596 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 311
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 159

Conread position: 10-439
Cow position: chr20:32084277-32083850 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 315
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 78, 25

Conread position: 11-411
Cow position: chr20:23792411-23792814 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 10

Conread position: 11-430
Cow position: chr20:12239872-12239450 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 122

Conread position: 12-309
Cow position: chr20:35797414-35797732 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 111

Conread position: 12-420
Cow position: chr20:39398297-39398711 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 12-434
Cow position: chr20:8578053-8578499 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 354

Conread position: 12-476
Cow position: chr20:13994618-13995095 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 322
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 204

Conread position: 13-446
Cow position: chr20:17251518-17251974 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 311
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 83, 49

Conread position: 14-263
Cow position: chr20:17903971-17904229 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 14-358
Cow position: chr20:9412303-9412658 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 142

Conread position: 14-452
Cow position: chr20:26996341-26996795 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 312

Conread position: 15-342
Cow position: chr20:36207614-36207970 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 121

Conread position: 17-313
Cow position: chr20:37165540-37165837 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 172

Conread position: 19-446
Cow position: chr20:3141399-3141830 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 288
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 108, 132

Conread position: 19-463
Cow position: chr20:14980698-14980235 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 322
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 6

Conread position: 20-420
Cow position: chr20:11045495-11045903 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 270
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 88, 60

Conread position: 21-211
Cow position: chr20:17733960-17733761 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 22-422
Cow position: chr20:19236897-19237302 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 273
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 227

Conread position: 25-205
Cow position: chr20:37272538-37272721 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 28

Conread position: 25-261
Cow position: chr20:28831785-28832039 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 27-181
Cow position: chr20:41119739-41119892 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 61

Conread position: 29-448
Cow position: chr20:2204839-2204429 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 59

Conread position: 32-451
Cow position: chr20:16935474-16935046 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 160

Conread position: 33-356
Cow position: chr20:3321308-3320976 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 149, 73

Conread position: 33-434
Cow position: chr20:3254878-3255279 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 114

Conread position: 35-327
Cow position: chr20:7210867-7211175 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 280

Conread position: 35-355
Cow position: chr20:7439017-7438681 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 25

Conread position: 40-205
Cow position: chr20:271586-271418 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 145

Conread position: 40-356
Cow position: chr20:15312496-15312837 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 326

Conread position: 43-180
Cow position: chr20:9701735-9701597 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 19

Conread position: 43-320
Cow position: chr20:8307853-8308151 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 48-279
Cow position: chr20:18837316-18837074 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 48-356
Cow position: chr20:15569105-15568781 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 281

Conread position: 48-364
Cow position: chr20:5636325-5636658 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 215

Conread position: 49-172
Cow position: chr20:9729932-9730057 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 6

Conread position: 49-432
Cow position: chr20:30710804-30710393 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 279
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 312

Conread position: 50-423
Cow position: chr20:5025096-5024734 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 53

Conread position: 55-226
Cow position: chr20:36010641-36010825 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 55-431
Cow position: chr20:28441178-28441559 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 265
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 33, 107

Conread position: 55-451
Cow position: chr20:34221326-34221740 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 268
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 111

Conread position: 56-420
Cow position: chr20:4334667-4334309 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 251
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 38

Conread position: 57-235
Cow position: chr20:39247763-39247955 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 79

Conread position: 61-448
Cow position: chr20:14433570-14433163 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 45, 279

Conread position: 66-437
Cow position: chr20:8546931-8547308 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 22

Conread position: 67-392
Cow position: chr20:22484724-22485063 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 197

Conread position: 69-430
Cow position: chr20:2298911-2298556 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 119

Conread position: 70-366
Cow position: chr20:22978185-22978507 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 296

Conread position: 74-325
Cow position: chr20:28955828-28955562 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 33

Conread position: 83-393
Cow position: chr20:32463641-32463323 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 269

Conread position: 84-354
Cow position: chr20:7362850-7363128 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 99

Conread position: 84-420
Cow position: chr20:25162247-25161902 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 262

Conread position: 84-437
Cow position: chr20:2819424-2819793 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 142

Conread position: 86-454
Cow position: chr20:28594167-28594556 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 244

Conread position: 87-452
Cow position: chr20:38431111-38430757 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 22, 103

Conread position: 88-459
Cow position: chr20:18379269-18379646 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 98, 68

Conread position: 105-327
Cow position: chr20:22265341-22265111 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 141

Conread position: 105-433
Cow position: chr20:7738322-7737991 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 78, 244

Conread position: 105-451
Cow position: chr20:23286419-23286065 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 64

Conread position: 115-334
Cow position: chr20:26077743-26077520 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 70

Conread position: 115-356
Cow position: chr20:32866273-32866028 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 39

Conread position: 122-355
Cow position: chr20:38868565-38868801 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 81

Conread position: 124-348
Cow position: chr20:21204283-21204516 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 126-364
Cow position: chr20:19091194-19090962 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 87

Conread position: 126-448
Cow position: chr20:4892167-4891864 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 135-450
Cow position: chr20:7624312-7624001 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 159

Conread position: 136-422
Cow position: chr20:354961-354667 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 137

Conread position: 136-435
Cow position: chr20:38089847-38090159 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 209

Conread position: 142-434
Cow position: chr20:17100302-17100620 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 143-455
Cow position: chr20:38514724-38515053 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 37, 58

Conread position: 181-428
Cow position: chr20:15529851-15530102 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 100, 18

Conread position: 181-460
Cow position: chr20:12126321-12126028 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 169

Conread position: 190-375
Cow position: chr20:21815556-21815751 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 157

Conread position: 198-419
Cow position: chr20:3148691-3148909 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 15

Conread position: 208-404
Cow position: chr20:15766125-15766325 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 157

Conread position: 234-419
Cow position: chr20:26041057-26040869 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 130

Conread position: 280-434
Cow position: chr20:23506029-23506181 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 142, 60

Show alignments to all cow chromosomes.