Cow genome map

Conread name: Mixn-0006h23

Conread position: 1-142
Cow position: chr21:35899627-35899772 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1-144
Cow position: chr21:28907825-28907683 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 1-151
Cow position: chr21:28029216-28029372 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 1-178
Cow position: chr21:20925687-20925508 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 103, 9

Conread position: 1-180
Cow position: chr21:10151614-10151795 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 95, 15

Conread position: 1-181
Cow position: chr21:2927384-2927201 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 23

Conread position: 1-181
Cow position: chr21:23683369-23683549 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 83

Conread position: 1-181
Cow position: chr21:40058625-40058806 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 20

Conread position: 1-181
Cow position: chr21:46829450-46829269 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 86

Conread position: 1-192
Cow position: chr21:31159074-31159275 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 50

Conread position: 1-198
Cow position: chr21:8618093-8618298 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 1-204
Cow position: chr21:34658853-34659061 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 132, 105

Conread position: 1-205
Cow position: chr21:48484622-48484419 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 16

Conread position: 1-206
Cow position: chr21:23785850-23786059 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 17

Conread position: 1-207
Cow position: chr21:46912363-46912570 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 25

Conread position: 1-218
Cow position: chr21:17428322-17428540 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 30

Conread position: 1-218
Cow position: chr21:22353411-22353193 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 30

Conread position: 1-218
Cow position: chr21:47802441-47802222 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 105, 187

Conread position: 1-220
Cow position: chr21:42023943-42024166 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 181, 0

Conread position: 1-232
Cow position: chr21:45866755-45866986 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 95, 42

Conread position: 1-234
Cow position: chr21:4098694-4098928 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 152, 85

Conread position: 1-234
Cow position: chr21:12616958-12617195 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 108, 87

Conread position: 1-235
Cow position: chr21:17302557-17302316 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 41

Conread position: 1-242
Cow position: chr21:912148-911896 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 105, 0

Conread position: 1-249
Cow position: chr21:2785958-2785699 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 87, 20

Conread position: 1-252
Cow position: chr21:16696189-16696447 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 34

Conread position: 1-259
Cow position: chr21:16612448-16612712 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 78

Conread position: 1-261
Cow position: chr21:28443560-28443283 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 1-263
Cow position: chr21:6764883-6764609 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 31

Conread position: 1-267
Cow position: chr21:13488338-13488622 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 1-268
Cow position: chr21:35569565-35569289 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 16

Conread position: 1-273
Cow position: chr21:5636902-5636619 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 213

Conread position: 1-276
Cow position: chr21:24222719-24222433 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 87, 45

Conread position: 1-277
Cow position: chr21:10601549-10601270 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 102, 15

Conread position: 1-277
Cow position: chr21:16187980-16187702 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 177, 15

Conread position: 1-277
Cow position: chr21:23192699-23192404 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1-277
Cow position: chr21:28442563-28442837 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 87, 184

Conread position: 1-277
Cow position: chr21:30607269-30606982 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 113, 137

Conread position: 1-277
Cow position: chr21:37345283-37344996 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 87, 252

Conread position: 1-277
Cow position: chr21:44515093-44515369 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 142, 78

Conread position: 1-278
Cow position: chr21:24130900-24131175 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 105, 16

Conread position: 1-283
Cow position: chr21:18845196-18844901 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 42

Conread position: 1-286
Cow position: chr21:18942010-18941720 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 47

Conread position: 1-286
Cow position: chr21:33997403-33997111 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 78

Conread position: 1-288
Cow position: chr21:33727642-33727345 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 181, 96

Conread position: 1-299
Cow position: chr21:10727100-10727404 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 181, 18

Conread position: 1-308
Cow position: chr21:4795041-4795363 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 1-310
Cow position: chr21:34391151-34390830 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 20

Conread position: 1-317
Cow position: chr21:42540401-42540070 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 87, 41

Conread position: 1-321
Cow position: chr21:2679371-2679705 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 299

Conread position: 1-321
Cow position: chr21:28955341-28955657 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 181, 72

Conread position: 1-323
Cow position: chr21:17174959-17175293 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 270

Conread position: 1-326
Cow position: chr21:18850400-18850063 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 181, 77

Conread position: 1-334
Cow position: chr21:23801302-23800959 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 176, 15

Conread position: 1-337
Cow position: chr21:15911219-15911572 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 105, 82

Conread position: 1-337
Cow position: chr21:38120926-38121273 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 100

Conread position: 1-341
Cow position: chr21:30990449-30990111 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 1-342
Cow position: chr21:28190847-28191209 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 87, 166

Conread position: 1-343
Cow position: chr21:725073-724711 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 286

Conread position: 1-343
Cow position: chr21:18828490-18828125 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 15

Conread position: 1-343
Cow position: chr21:42348859-42348520 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 205

Conread position: 1-343
Cow position: chr21:44671572-44671922 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 167

Conread position: 1-343
Cow position: chr21:45355655-45356011 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 102, 0

Conread position: 1-344
Cow position: chr21:33210017-33210368 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 208

Conread position: 1-347
Cow position: chr21:25764454-25764816 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 87, 15

Conread position: 1-348
Cow position: chr21:395695-396048 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 105, 15

Conread position: 1-348
Cow position: chr21:28626060-28626418 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 87, 38

Conread position: 1-356
Cow position: chr21:28923945-28924301 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 36

Conread position: 1-356
Cow position: chr21:32237116-32237469 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 132, 105

Conread position: 1-359
Cow position: chr21:23586695-23587073 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 87, 338

Conread position: 1-359
Cow position: chr21:36297298-36297686 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 15

Conread position: 1-361
Cow position: chr21:33263667-33264040 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 64

Conread position: 1-362
Cow position: chr21:42384324-42384706 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 0

Conread position: 1-364
Cow position: chr21:5392723-5392336 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 15

Conread position: 1-366
Cow position: chr21:1591370-1591758 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 87, 16

Conread position: 1-366
Cow position: chr21:23322262-23321877 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 87, 16

Conread position: 1-366
Cow position: chr21:29484803-29485177 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 15

Conread position: 1-367
Cow position: chr21:13898010-13898379 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 247
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 16

Conread position: 1-385
Cow position: chr21:9416061-9416465 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 348

Conread position: 1-385
Cow position: chr21:9990333-9990726 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 46

Conread position: 1-413
Cow position: chr21:19196349-19195918 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 282
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 330

Conread position: 1-416
Cow position: chr21:81889-82305 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 217

Conread position: 1-416
Cow position: chr21:30231884-30231450 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 12, 198

Conread position: 1-419
Cow position: chr21:3361195-3360767 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 87, 9

Conread position: 1-419
Cow position: chr21:15445260-15444833 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 104

Conread position: 1-419
Cow position: chr21:22860821-22861241 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 15

Conread position: 1-420
Cow position: chr21:41974560-41974117 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 297
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 87, 0

Conread position: 1-424
Cow position: chr21:24858130-24858570 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 358

Conread position: 1-427
Cow position: chr21:30849120-30848690 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 308
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 88, 41

Conread position: 1-430
Cow position: chr21:802475-802062 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 74

Conread position: 1-433
Cow position: chr21:7672952-7673376 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 16

Conread position: 1-433
Cow position: chr21:9310862-9311318 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 289
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 341

Conread position: 1-433
Cow position: chr21:20262515-20262084 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 157

Conread position: 1-433
Cow position: chr21:27229976-27229540 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 332

Conread position: 1-433
Cow position: chr21:41620938-41621391 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 307
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 80, 258

Conread position: 1-433
Cow position: chr21:41957355-41956938 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 287
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 107, 74

Conread position: 1-434
Cow position: chr21:6051325-6051770 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 109

Conread position: 1-434
Cow position: chr21:21216322-21215892 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 299
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 105, 133

Conread position: 1-434
Cow position: chr21:33982991-33982549 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 136

Conread position: 1-434
Cow position: chr21:46263995-46264456 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 38

Conread position: 1-435
Cow position: chr21:40589664-40589209 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 314
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 87, 136

Conread position: 1-437
Cow position: chr21:641403-641852 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 52

Conread position: 1-437
Cow position: chr21:6833871-6834317 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 298
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 108, 70

Conread position: 1-437
Cow position: chr21:27521506-27521075 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 295
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 127, 16

Conread position: 1-437
Cow position: chr21:37479775-37480232 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 181

Conread position: 1-437
Cow position: chr21:44252007-44251574 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 95

Conread position: 1-437
Cow position: chr21:44826060-44825605 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 20

Conread position: 1-439
Cow position: chr21:13585239-13584782 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 302
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 161, 17

Conread position: 1-448
Cow position: chr21:11740313-11739842 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 160

Conread position: 1-448
Cow position: chr21:22718962-22718508 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 181

Conread position: 1-449
Cow position: chr21:11114530-11114996 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 300
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 87

Conread position: 1-449
Cow position: chr21:40133974-40134423 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 302
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 27, 289

Conread position: 1-451
Cow position: chr21:29002343-29001864 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 335

Conread position: 1-454
Cow position: chr21:4282049-4281599 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 300
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 96, 103

Conread position: 1-454
Cow position: chr21:31253354-31253815 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 223

Conread position: 1-454
Cow position: chr21:32559535-32559084 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 74

Conread position: 1-455
Cow position: chr21:15867131-15867583 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 291
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 45

Conread position: 1-455
Cow position: chr21:27569339-27568874 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 16

Conread position: 1-461
Cow position: chr21:6713719-6713233 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 327
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 170

Conread position: 1-471
Cow position: chr21:5898580-5898107 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 321
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 200

Conread position: 1-478
Cow position: chr21:37299284-37299769 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 133

Conread position: 1-479
Cow position: chr21:38918034-38918513 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 315
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 105, 15

Conread position: 2-434
Cow position: chr21:643153-643590 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 101

Conread position: 3-219
Cow position: chr21:1464049-1464272 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 215

Conread position: 3-388
Cow position: chr21:27146173-27145770 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 268
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 8, 45

Conread position: 3-433
Cow position: chr21:30592482-30592051 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 13

Conread position: 4-205
Cow position: chr21:18494788-18494997 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 80, 15

Conread position: 4-205
Cow position: chr21:46973305-46973105 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 72

Conread position: 4-209
Cow position: chr21:4080176-4080391 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 21

Conread position: 4-218
Cow position: chr21:42913924-42913702 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 131

Conread position: 4-248
Cow position: chr21:47067065-47066827 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 14

Conread position: 4-261
Cow position: chr21:7132640-7132389 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 84, 12

Conread position: 4-291
Cow position: chr21:32535798-32536096 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 100, 117

Conread position: 4-298
Cow position: chr21:8235722-8235429 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 178, 12

Conread position: 4-334
Cow position: chr21:9710882-9710563 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 21, 159

Conread position: 4-355
Cow position: chr21:38900595-38900960 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 306

Conread position: 4-355
Cow position: chr21:47764290-47763930 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 178, 15

Conread position: 4-356
Cow position: chr21:4399621-4399994 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 256
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 123, 253

Conread position: 4-356
Cow position: chr21:45473936-45473568 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 353

Conread position: 4-366
Cow position: chr21:7582087-7581706 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 12

Conread position: 4-419
Cow position: chr21:3585535-3585115 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 12

Conread position: 4-419
Cow position: chr21:47465299-47464870 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 292
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 84, 63

Conread position: 4-420
Cow position: chr21:23821990-23822402 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 31

Conread position: 4-430
Cow position: chr21:11645147-11644705 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 361

Conread position: 4-430
Cow position: chr21:17183743-17184179 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 4-435
Cow position: chr21:28734090-28733645 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 130

Conread position: 4-437
Cow position: chr21:39403716-39403257 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 312
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 84, 12

Conread position: 4-446
Cow position: chr21:10263865-10264311 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 307
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 178, 14

Conread position: 4-447
Cow position: chr21:42135802-42135343 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 359

Conread position: 4-448
Cow position: chr21:14452052-14452509 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 314
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 40, 13

Conread position: 4-448
Cow position: chr21:41155683-41156147 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 23

Conread position: 4-479
Cow position: chr21:5649728-5650204 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 311
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 104, 31

Conread position: 5-248
Cow position: chr21:35897803-35897563 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 214, 92

Conread position: 5-277
Cow position: chr21:2367163-2367437 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 74

Conread position: 5-277
Cow position: chr21:3498321-3498598 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 74

Conread position: 5-279
Cow position: chr21:28881965-28882246 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 124, 70

Conread position: 5-322
Cow position: chr21:19363641-19363303 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 100

Conread position: 5-354
Cow position: chr21:33562838-33563190 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 38

Conread position: 5-356
Cow position: chr21:33350565-33350930 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 215

Conread position: 5-437
Cow position: chr21:17511599-17512041 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 295
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 83, 58

Conread position: 6-236
Cow position: chr21:5137666-5137423 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 6-449
Cow position: chr21:3236356-3236782 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 294
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 177, 11

Conread position: 7-175
Cow position: chr21:5566814-5566995 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 116

Conread position: 7-178
Cow position: chr21:49353026-49353199 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 99

Conread position: 7-350
Cow position: chr21:21077155-21077493 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 81, 39

Conread position: 7-355
Cow position: chr21:28989440-28989804 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 19

Conread position: 7-376
Cow position: chr21:44565877-44565514 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 60

Conread position: 7-445
Cow position: chr21:32339912-32339469 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 304
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 97, 68

Conread position: 9-362
Cow position: chr21:36795430-36795802 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 173, 88

Conread position: 10-181
Cow position: chr21:40065485-40065313 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 72

Conread position: 10-181
Cow position: chr21:47861022-47861199 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 10-211
Cow position: chr21:37361640-37361442 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 117, 76

Conread position: 10-286
Cow position: chr21:36756442-36756715 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 59

Conread position: 10-353
Cow position: chr21:24598489-24598843 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 97, 170

Conread position: 10-364
Cow position: chr21:30250381-30250007 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 190

Conread position: 11-226
Cow position: chr21:393850-394069 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 77, 172

Conread position: 11-420
Cow position: chr21:29069500-29069073 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 347

Conread position: 11-434
Cow position: chr21:29214320-29213894 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 77

Conread position: 12-181
Cow position: chr21:4189664-4189837 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 12-186
Cow position: chr21:38692019-38692193 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 76

Conread position: 12-222
Cow position: chr21:48251200-48250980 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 124

Conread position: 13-169
Cow position: chr21:24797523-24797676 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 58

Conread position: 13-303
Cow position: chr21:13738399-13738691 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 23

Conread position: 13-437
Cow position: chr21:34653913-34654340 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 23

Conread position: 14-276
Cow position: chr21:4998655-4998391 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 89, 199

Conread position: 17-208
Cow position: chr21:5344490-5344689 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 25

Conread position: 18-420
Cow position: chr21:10114493-10114083 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 281
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 164, 93

Conread position: 20-277
Cow position: chr21:15584573-15584314 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 29

Conread position: 21-362
Cow position: chr21:39401433-39401783 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 85, 236

Conread position: 21-364
Cow position: chr21:27624551-27624898 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 85, 22

Conread position: 22-193
Cow position: chr21:42190329-42190159 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 107, 55

Conread position: 22-434
Cow position: chr21:32297671-32297243 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 66, 159

Conread position: 23-160
Cow position: chr21:43631362-43631219 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 23-447
Cow position: chr21:41590716-41590291 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 78

Conread position: 24-437
Cow position: chr21:13840164-13840595 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 277
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 38

Conread position: 25-448
Cow position: chr21:18800686-18800253 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 154

Conread position: 26-162
Cow position: chr21:14125889-14126030 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 26-354
Cow position: chr21:45921215-45920873 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 20

Conread position: 27-362
Cow position: chr21:10633796-10633446 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 79, 307

Conread position: 28-361
Cow position: chr21:24642364-24642706 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 48

Conread position: 32-356
Cow position: chr21:26244781-26245103 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 146, 43

Conread position: 35-256
Cow position: chr21:14515697-14515925 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 188

Conread position: 36-327
Cow position: chr21:18041989-18041705 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 70, 41

Conread position: 36-460
Cow position: chr21:10005032-10004587 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 304
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 51, 74

Conread position: 37-434
Cow position: chr21:957521-957933 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 5, 123

Conread position: 38-419
Cow position: chr21:7825320-7824941 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 161

Conread position: 39-348
Cow position: chr21:29978907-29978579 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 117

Conread position: 39-356
Cow position: chr21:42007603-42007269 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 40

Conread position: 42-277
Cow position: chr21:44733303-44733068 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 93

Conread position: 45-342
Cow position: chr21:12723019-12723328 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 43, 115

Conread position: 45-446
Cow position: chr21:17875333-17874914 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 268
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 285

Conread position: 48-364
Cow position: chr21:11359903-11360223 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 248

Conread position: 48-420
Cow position: chr21:20260455-20260047 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 0

Conread position: 48-434
Cow position: chr21:12462105-12461705 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 318

Conread position: 55-420
Cow position: chr21:46911-47297 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 255
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 280

Conread position: 56-433
Cow position: chr21:27810278-27810655 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 160

Conread position: 57-209
Cow position: chr21:949794-949645 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 42

Conread position: 57-273
Cow position: chr21:20192777-20192998 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 123, 46

Conread position: 59-457
Cow position: chr21:30222218-30222630 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 107

Conread position: 60-420
Cow position: chr21:30835251-30835616 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 260
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 15

Conread position: 63-437
Cow position: chr21:18155693-18155297 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 260
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 276

Conread position: 65-364
Cow position: chr21:40168752-40168429 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 273

Conread position: 72-448
Cow position: chr21:23980292-23979903 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 254
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 184

Conread position: 84-448
Cow position: chr21:16914677-16915058 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 250
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 246

Conread position: 87-448
Cow position: chr21:44658487-44658837 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 142

Conread position: 89-447
Cow position: chr21:45906714-45906346 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 239
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 243

Conread position: 92-357
Cow position: chr21:16569813-16570088 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 232

Conread position: 105-356
Cow position: chr21:4280747-4280486 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 57

Conread position: 105-426
Cow position: chr21:37014478-37014168 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 174

Conread position: 105-460
Cow position: chr21:36909859-36910241 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 251
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 319

Conread position: 106-352
Cow position: chr21:45262886-45262623 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 106-448
Cow position: chr21:47719373-47719029 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 244
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 46

Conread position: 106-460
Cow position: chr21:24343339-24342970 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 240
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 143

Conread position: 108-437
Cow position: chr21:40266049-40266391 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 230

Conread position: 111-433
Cow position: chr21:44214055-44214375 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 230
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 72, 175

Conread position: 120-430
Cow position: chr21:8426381-8426704 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 35, 221

Conread position: 120-431
Cow position: chr21:8349268-8349584 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 221

Conread position: 122-324
Cow position: chr21:35899786-35900000 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 170

Conread position: 122-449
Cow position: chr21:12339581-12339894 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 32

Conread position: 122-460
Cow position: chr21:13656687-13656346 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 56

Conread position: 130-446
Cow position: chr21:41522457-41522137 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 89

Conread position: 131-437
Cow position: chr21:19060136-19059824 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 209
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 105

Conread position: 137-437
Cow position: chr21:742245-742544 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 19

Conread position: 143-430
Cow position: chr21:674655-674929 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 36

Conread position: 149-435
Cow position: chr21:21615757-21616043 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 22

Conread position: 152-433
Cow position: chr21:71559-71852 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 6, 25

Conread position: 156-448
Cow position: chr21:28030264-28030559 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 126

Conread position: 158-453
Cow position: chr21:12354715-12354416 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 134

Conread position: 165-413
Cow position: chr21:829225-828967 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 164

Conread position: 194-448
Cow position: chr21:36682346-36682607 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 154

Conread position: 198-420
Cow position: chr21:19240847-19240628 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 81, 158

Conread position: 198-434
Cow position: chr21:17252953-17252712 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 69

Conread position: 198-434
Cow position: chr21:20163735-20163970 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 83, 15

Conread position: 200-430
Cow position: chr21:22850950-22851176 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 27

Conread position: 210-448
Cow position: chr21:16498556-16498793 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 133

Conread position: 211-446
Cow position: chr21:39393786-39394030 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 136

Conread position: 217-431
Cow position: chr21:24875397-24875613 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 55, 131

Conread position: 224-462
Cow position: chr21:40820801-40820557 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 106

Conread position: 230-434
Cow position: chr21:8506488-8506281 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 117

Conread position: 230-434
Cow position: chr21:8509376-8509169 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 117

Show alignments to all cow chromosomes.