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Cow genome map

           
Conread name:
           
Mixn-0006h23
        

               
Conread position:
               
1-147
               

               
Cow position:
               
chr28:16879507-16879365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr28:7723635-7723462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr28:20760163-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr28:3077754-3077932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr28:11451706-11451520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr28:15375065-15374879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
84, 153
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr28:25424541-25424357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr28:23530625-23530836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr28:13607646-13607855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr28:22170957-22170746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr28:23839970-23840171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
176, 15
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr28:7590421-7590198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
105, 218
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr28:8348892-8348657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
87, 181
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr28:12048938-12048708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr28:2905341-2905578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
105, 181
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr28:16686793-16687023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
207, 151
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr28:23480501-23480253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr28:3751080-3751332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr28:19222836-19222580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr28:24646301-24646561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 167
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr28:18790772-18791057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr28:4587861-4588142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr28:5904497-5904774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr28:22279422-22279154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
126, 47
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr28:19080087-19079798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
75, 259
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr28:4057747-4058050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr28:5128966-5128618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr28:8022350-8021992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr28:4841636-4841277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 168
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr28:30327320-30326977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
105, 23
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr28:26719121-26719460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
181, 35
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr28:21598492-21598132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr28:19026242-19025877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
181, 68
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr28:10172653-10172286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 145
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr28:26220022-26220390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 71
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr28:11752384-11752008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 347
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr28:2898756-2899123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
103, 207
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr28:4938599-4938936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
106, 82
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr28:5203963-5204329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 16
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr28:2862622-2863013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr28:6971578-6971206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr28:12619323-12619717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
87, 331
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr28:20313036-20313419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr28:29199488-29199872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr28:22321183-22321568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr28:11527495-11527076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr28:7144549-7144990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
110, 343
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr28:16370313-16369898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr28:24672034-24672459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr28:24996827-24996427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr28:26743383-26743822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr28:11585447-11585014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 359
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr28:22345780-22346217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr28:4914341-4913894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
87, 323
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr28:7268175-7267749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr28:27218081-27218525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 253
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr28:3745962-3746399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 218
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr28:12430369-12430807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 274
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr28:3024151-3023712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 161
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr28:5236839-5236390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:4070730-4071164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:4282731-4282284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 151
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:8787311-8787746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 24
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:11423043-11422613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 36
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:11426784-11426340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:13267542-13267974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 252
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:13474067-13474505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 15
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:25056732-25057162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 176
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr28:30303432-30303003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr28:5817608-5818046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr28:15272500-15272062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
107, 151
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr28:22132687-22133116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 120
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr28:5684465-5684916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr28:7698221-7697762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr28:9636696-9636242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 190
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr28:20124546-20124999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr28:21868213-21868676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr28:23616163-23616623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 326
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr28:33884170-33884620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr28:31841579-31841125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 175
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr28:15263964-15263492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 310
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr28:14997825-14998292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr28:22332310-22332763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 39
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr28:34082260-34082074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr28:6051494-6051741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr28:10762435-10762712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
2-433
               

               
Cow position:
               
chr28:16204572-16204126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 221
               

               
Conread position:
               
3-437
               

               
Cow position:
               
chr28:23459906-23460352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 200
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr28:23775809-23776018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 149
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr28:16441151-16441354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr28:4022146-4022367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr28:19295599-19295369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr28:5658318-5658552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr28:5553166-5552913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr28:8084461-8084732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr28:7549298-7549006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr28:15044091-15043750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr28:18591033-18591383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr28:23410560-23410192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
130, 106
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr28:25596396-25596761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr28:3144126-3143748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr28:21354988-21355361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
4-369
               

               
Cow position:
               
chr28:28163858-28164228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr28:11687269-11686853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
84, 310
               

               
Conread position:
               
4-416
               

               
Cow position:
               
chr28:16346762-16346351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
4-416
               

               
Cow position:
               
chr28:22323029-22323446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
84, 270
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr28:10744973-10745406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr28:9285614-9285175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 353
               

               
Conread position:
               
4-431
               

               
Cow position:
               
chr28:1099878-1099474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 102
               

               
Conread position:
               
4-437
               

               
Cow position:
               
chr28:21844720-21845159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
4-449
               

               
Cow position:
               
chr28:34430663-34430206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
84, 330
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr28:21672564-21672872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr28:7512827-7512389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 217
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr28:3914475-3914903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chr28:34229994-34230453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 105
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr28:16243993-16243726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr28:6861719-6862000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr28:11786942-11786620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr28:33051786-33052166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 353
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr28:11884757-11884384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
6-456
               

               
Cow position:
               
chr28:12964343-12964807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
7-161
               

               
Cow position:
               
chr28:8372237-8372397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr28:7751534-7751246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 155
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr28:2961056-2960696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
7-433
               

               
Cow position:
               
chr28:22371909-22371460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
7-448
               

               
Cow position:
               
chr28:4308131-4307674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
8-249
               

               
Cow position:
               
chr28:10212930-10212699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr28:17362811-17362547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
8-356
               

               
Cow position:
               
chr28:2132155-2131794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
9-434
               

               
Cow position:
               
chr28:5144754-5144303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 157
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr28:15007934-15008146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr28:7980649-7980399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 176
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr28:23007956-23007610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr28:14649118-14649477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 253
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr28:5771139-5771500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
189, 96
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr28:5366360-5365983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
10-443
               

               
Cow position:
               
chr28:12951202-12951631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
10-449
               

               
Cow position:
               
chr28:16919392-16918952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 171
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr28:8656965-8656742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr28:15063569-15063309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 158
               

               
Conread position:
               
11-316
               

               
Cow position:
               
chr28:25282976-25283286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
11-344
               

               
Cow position:
               
chr28:23675914-23676258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 63
               

               
Conread position:
               
11-448
               

               
Cow position:
               
chr28:3493014-3492567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
11-451
               

               
Cow position:
               
chr28:750997-751446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
12-351
               

               
Cow position:
               
chr28:33163696-33163338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 345
               

               
Conread position:
               
13-181
               

               
Cow position:
               
chr28:16253085-16252917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 93
               

               
Conread position:
               
13-454
               

               
Cow position:
               
chr28:10053566-10053107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
55, 340
               

               
Conread position:
               
13-459
               

               
Cow position:
               
chr28:24966160-24966615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 171
               

               
Conread position:
               
14-354
               

               
Cow position:
               
chr28:25727151-25727500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 317
               

               
Conread position:
               
14-434
               

               
Cow position:
               
chr28:8347508-8347939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
15-456
               

               
Cow position:
               
chr28:4016304-4016750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
19-434
               

               
Cow position:
               
chr28:18625001-18625440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 323
               

               
Conread position:
               
21-266
               

               
Cow position:
               
chr28:9108222-9108475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 198
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr28:3256573-3256840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
21-337
               

               
Cow position:
               
chr28:26614669-26614986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
21-424
               

               
Cow position:
               
chr28:25806363-25806792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
21-434
               

               
Cow position:
               
chr28:5074724-5074315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
22-267
               

               
Cow position:
               
chr28:2738030-2737770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
32-419
               

               
Cow position:
               
chr28:4884475-4884063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
32-434
               

               
Cow position:
               
chr28:5437300-5436880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
56, 316
               

               
Conread position:
               
32-456
               

               
Cow position:
               
chr28:29416925-29416495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
37-430
               

               
Cow position:
               
chr28:4090248-4089858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 64
               

               
Conread position:
               
37-454
               

               
Cow position:
               
chr28:6091157-6091581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
39-434
               

               
Cow position:
               
chr28:23724658-23724264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
42-410
               

               
Cow position:
               
chr28:4138868-4138486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
42-434
               

               
Cow position:
               
chr28:10844920-10845307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
43-360
               

               
Cow position:
               
chr28:4809596-4809912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
48-448
               

               
Cow position:
               
chr28:4835038-4834619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
50-434
               

               
Cow position:
               
chr28:30937857-30937477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
51-277
               

               
Cow position:
               
chr28:3000784-3000562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
52-423
               

               
Cow position:
               
chr28:9684508-9684143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
54-286
               

               
Cow position:
               
chr28:17235915-17235681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
55-348
               

               
Cow position:
               
chr28:4881430-4881118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 304
               

               
Conread position:
               
55-420
               

               
Cow position:
               
chr28:11829128-11828768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
55-437
               

               
Cow position:
               
chr28:11866855-11866460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
56-445
               

               
Cow position:
               
chr28:13290319-13289942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
57-356
               

               
Cow position:
               
chr28:2752684-2752362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
60-268
               

               
Cow position:
               
chr28:28903847-28903626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
60-325
               

               
Cow position:
               
chr28:18186379-18186657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
63-428
               

               
Cow position:
               
chr28:22308472-22308843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
63-445
               

               
Cow position:
               
chr28:657625-657246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
65-233
               

               
Cow position:
               
chr28:26264628-26264803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
66-420
               

               
Cow position:
               
chr28:4643939-4643579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
75-434
               

               
Cow position:
               
chr28:4158793-4159172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
76-437
               

               
Cow position:
               
chr28:5199664-5200035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
82-448
               

               
Cow position:
               
chr28:8358746-8359119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
84-449
               

               
Cow position:
               
chr28:29989269-29988886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
20, 261
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr28:24082116-24082465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr28:7608133-7607948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr28:2872765-2873016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
89-355
               

               
Cow position:
               
chr28:30746879-30746599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
93-243
               

               
Cow position:
               
chr28:10202334-10202485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
105-454
               

               
Cow position:
               
chr28:10863915-10863576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
105-454
               

               
Cow position:
               
chr28:19262722-19262359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
106-435
               

               
Cow position:
               
chr28:8140350-8140693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 246
               

               
Conread position:
               
120-420
               

               
Cow position:
               
chr28:11079188-11079491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 154
               

               
Conread position:
               
123-420
               

               
Cow position:
               
chr28:25128768-25129075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 223
               

               
Conread position:
               
125-434
               

               
Cow position:
               
chr28:5577412-5577740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr28:27161440-27161195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 182
               

               
Conread position:
               
126-437
               

               
Cow position:
               
chr28:3011385-3011059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 214
               

               
Conread position:
               
132-350
               

               
Cow position:
               
chr28:16246169-16245941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
136-420
               

               
Cow position:
               
chr28:4181900-4182192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 234
               

               
Conread position:
               
148-443
               

               
Cow position:
               
chr28:3740792-3741083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
156-434
               

               
Cow position:
               
chr28:7350575-7350858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 193
               

               
Conread position:
               
157-449
               

               
Cow position:
               
chr28:5139078-5138779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 139
               

               
Conread position:
               
170-434
               

               
Cow position:
               
chr28:4013020-4013289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
13, 178
               

               
Conread position:
               
180-434
               

               
Cow position:
               
chr28:7132131-7131883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
181-414
               

               
Cow position:
               
chr28:7557777-7557545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
185-419
               

               
Cow position:
               
chr28:3445533-3445290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 177
               

               
Conread position:
               
194-434
               

               
Cow position:
               
chr28:5254838-5255079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
194-435
               

               
Cow position:
               
chr28:777637-777883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
197-448
               

               
Cow position:
               
chr28:9705619-9705874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
201-420
               

               
Cow position:
               
chr28:26531306-26531090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
204-454
               

               
Cow position:
               
chr28:17949141-17948891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 133
               

               
Conread position:
               
207-437
               

               
Cow position:
               
chr28:17739801-17740036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
280-448
               

               
Cow position:
               
chr28:27787622-27787784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
281-423
               

               
Cow position:
               
chr28:4077289-4077143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
282-454
               

               
Cow position:
               
chr28:3257046-3257215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 84
               
Show alignments to all cow chromosomes.