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Cow genome map

           
Conread name:
           
Mixn-0006h23
        

               
Conread position:
               
1-144
               

               
Cow position:
               
chr29:21665724-21665869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr29:2136345-2136190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr29:32308570-32308396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr29:4804987-4805168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
125, 163
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr29:26335624-26335440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 118
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr29:28868385-28868597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr29:12798684-12798882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
181, 36
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr29:8125839-8125626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr29:28689364-28689589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 203
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr29:35281257-35281473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 16
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr29:3395864-3396086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 103
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:20429219-20428991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 191
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr29:28273634-28273391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr29:24345710-24345454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr29:4328188-4328433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
180, 34
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr29:11136134-11135876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr29:2522332-2522591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr29:18212228-18211965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr29:6293713-6293439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr29:19792526-19792231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr29:5099008-5098718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr29:29974795-29975086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
87, 52
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr29:17351-17031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr29:45005862-45005526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr29:22162499-22162143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr29:16309504-16309848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
182, 77
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr29:17607170-17607527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
85, 164
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr29:39567442-39567792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr29:9911931-9912285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 76
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr29:31926536-31926178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr29:109464-109811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
207, 15
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr29:4875149-4874755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 340
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr29:41811823-41811464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr29:31594361-31594018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
181, 76
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr29:6844875-6844502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr29:18085344-18085704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr29:25088507-25088878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 151
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr29:13372417-13372798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
87, 326
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr29:10156535-10156173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
182, 15
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr29:25333699-25333328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr29:26318948-26319298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
274, 15
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr29:87263-86854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr29:1556686-1557094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 152
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr29:21933359-21932946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 190
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr29:38581723-38582150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr29:42364260-42363838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr29:10058773-10058359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr29:28197254-28196836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 135
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr29:20933459-20933900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 187
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr29:24952440-24952872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr29:29769592-29769169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr29:34360040-34359641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr29:44378664-44378218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr29:12784201-12783757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr29:19762026-19762463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 182
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr29:26778638-26779075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr29:28775700-28775266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr29:19756202-19756639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr29:1933804-1933368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
10, 190
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr29:2744518-2744067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
110, 336
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr29:3502310-3502764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 144
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr29:12679909-12680363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr29:29589163-29588723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr29:5062886-5063346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr29:1325195-1325649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr29:8926705-8926241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 130
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr29:26673149-26672686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr29:34745900-34745448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr29:14501348-14501809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr29:17109724-17110166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr29:32799949-32799491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
76, 86
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr29:39111554-39111113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 59
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr29:25737663-25737204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr29:22613189-22613641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr29:35406040-35405574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
105, 332
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr29:16609492-16609970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr29:41530604-41531070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
1-726
               

               
Cow position:
               
chr29:19389240-19389971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr29:477858-478071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr29:17409084-17409374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr29:6925773-6926074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr29:26263606-26263930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
220, 51
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr29:4065844-4066055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 16
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr29:14615500-14615218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr29:37292534-37292709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr29:17135607-17135779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr29:13615886-13615610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr29:40165999-40166316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr29:26615968-26615605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr29:11562371-11562805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 106
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr29:35291856-35292285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
179, 78
               

               
Conread position:
               
4-448
               

               
Cow position:
               
chr29:10838707-10839150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 341
               

               
Conread position:
               
4-448
               

               
Cow position:
               
chr29:36530620-36531081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 356
               

               
Conread position:
               
4-461
               

               
Cow position:
               
chr29:9709456-9709917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr29:27833745-27833968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 197
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr29:37785421-37785130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 192
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr29:35501890-35501481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
5-428
               

               
Cow position:
               
chr29:26017753-26017307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chr29:31928737-31929204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr29:9686242-9685982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr29:10659589-10659300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 189
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr29:26986706-26986978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr29:10456789-10456527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
10-420
               

               
Cow position:
               
chr29:22714965-22714525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 251
               

               
Conread position:
               
10-446
               

               
Cow position:
               
chr29:23874222-23874673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 142
               

               
Conread position:
               
10-455
               

               
Cow position:
               
chr29:4520098-4520555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 269
               

               
Conread position:
               
11-214
               

               
Cow position:
               
chr29:36183039-36183253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
11-357
               

               
Cow position:
               
chr29:36216881-36217236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 185
               

               
Conread position:
               
11-358
               

               
Cow position:
               
chr29:34773964-34773610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr29:1395369-1395715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
167, 51
               

               
Conread position:
               
11-374
               

               
Cow position:
               
chr29:11704886-11705256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
77, 129
               

               
Conread position:
               
11-411
               

               
Cow position:
               
chr29:32733094-32733472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
226, 64
               

               
Conread position:
               
11-420
               

               
Cow position:
               
chr29:13639603-13639184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
11-434
               

               
Cow position:
               
chr29:2623716-2623281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 210
               

               
Conread position:
               
11-448
               

               
Cow position:
               
chr29:19949073-19949517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
12-219
               

               
Cow position:
               
chr29:24103784-24103568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 185
               

               
Conread position:
               
12-356
               

               
Cow position:
               
chr29:23697743-23698103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
117, 94
               

               
Conread position:
               
12-360
               

               
Cow position:
               
chr29:24624012-24624376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
13-453
               

               
Cow position:
               
chr29:23844597-23845061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
14-288
               

               
Cow position:
               
chr29:19254056-19253779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 223
               

               
Conread position:
               
14-356
               

               
Cow position:
               
chr29:40852699-40853053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 137
               

               
Conread position:
               
14-430
               

               
Cow position:
               
chr29:40117335-40117761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 111
               

               
Conread position:
               
15-461
               

               
Cow position:
               
chr29:43495827-43496271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
184, 88
               

               
Conread position:
               
17-235
               

               
Cow position:
               
chr29:4327260-4327489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
17-366
               

               
Cow position:
               
chr29:22175460-22175813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
19-277
               

               
Cow position:
               
chr29:19428435-19428698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
21-434
               

               
Cow position:
               
chr29:4480402-4479967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-430
               

               
Cow position:
               
chr29:23155027-23155431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
25-173
               

               
Cow position:
               
chr29:2532839-2532995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
27-214
               

               
Cow position:
               
chr29:5109431-5109232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
27-360
               

               
Cow position:
               
chr29:28166438-28166095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
56, 191
               

               
Conread position:
               
31-265
               

               
Cow position:
               
chr29:44682307-44682077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
31-303
               

               
Cow position:
               
chr29:22778398-22778104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
31-356
               

               
Cow position:
               
chr29:26654257-26653920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 151
               

               
Conread position:
               
32-277
               

               
Cow position:
               
chr29:14484761-14484498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
32-339
               

               
Cow position:
               
chr29:28446475-28446148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 228
               

               
Conread position:
               
32-449
               

               
Cow position:
               
chr29:16657470-16657905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
32-460
               

               
Cow position:
               
chr29:35677760-35677313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
34-362
               

               
Cow position:
               
chr29:42570056-42570364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
34-450
               

               
Cow position:
               
chr29:31489106-31489536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 292
               

               
Conread position:
               
42-337
               

               
Cow position:
               
chr29:10818642-10818344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 214
               

               
Conread position:
               
46-249
               

               
Cow position:
               
chr29:9718974-9718756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
48-404
               

               
Cow position:
               
chr29:3100461-3100096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
48-434
               

               
Cow position:
               
chr29:25091910-25092304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
49-424
               

               
Cow position:
               
chr29:19125145-19125519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 173
               

               
Conread position:
               
49-447
               

               
Cow position:
               
chr29:26275415-26275811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
51-359
               

               
Cow position:
               
chr29:28979677-28979377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
54-327
               

               
Cow position:
               
chr29:5186692-5186397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
55-348
               

               
Cow position:
               
chr29:11054046-11053743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
55-452
               

               
Cow position:
               
chr29:36209972-36210368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
56-267
               

               
Cow position:
               
chr29:43009276-43009055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 179
               

               
Conread position:
               
56-348
               

               
Cow position:
               
chr29:32211251-32210956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr29:11646914-11647226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
157, 41
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr29:4334539-4334836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 210
               

               
Conread position:
               
65-434
               

               
Cow position:
               
chr29:37618123-37618507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
68-418
               

               
Cow position:
               
chr29:43099925-43099566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
70-366
               

               
Cow position:
               
chr29:27588743-27589056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 180
               

               
Conread position:
               
80-434
               

               
Cow position:
               
chr29:29942900-29942527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 178
               

               
Conread position:
               
83-360
               

               
Cow position:
               
chr29:24252074-24252364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 176
               

               
Conread position:
               
83-454
               

               
Cow position:
               
chr29:17296967-17297359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 174
               

               
Conread position:
               
84-320
               

               
Cow position:
               
chr29:27826363-27826609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
88-433
               

               
Cow position:
               
chr29:31674471-31674829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 245
               

               
Conread position:
               
89-430
               

               
Cow position:
               
chr29:12025629-12025278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 178
               

               
Conread position:
               
103-318
               

               
Cow position:
               
chr29:27329750-27329980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
105-356
               

               
Cow position:
               
chr29:29314795-29314537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 202
               

               
Conread position:
               
105-420
               

               
Cow position:
               
chr29:24045850-24046183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
108-350
               

               
Cow position:
               
chr29:4002759-4003009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
108-433
               

               
Cow position:
               
chr29:31943743-31944066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
112-469
               

               
Cow position:
               
chr29:28735178-28734817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 210
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr29:29176747-29176506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
120-416
               

               
Cow position:
               
chr29:34359105-34358797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
125-464
               

               
Cow position:
               
chr29:30227393-30227051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 194
               

               
Conread position:
               
134-449
               

               
Cow position:
               
chr29:5046541-5046863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
136-423
               

               
Cow position:
               
chr29:1007707-1008006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
156-437
               

               
Cow position:
               
chr29:21665998-21666289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 204
               

               
Conread position:
               
160-437
               

               
Cow position:
               
chr29:20770258-20770549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 193
               

               
Conread position:
               
167-434
               

               
Cow position:
               
chr29:23220578-23220288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
169-420
               

               
Cow position:
               
chr29:29324488-29324235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
176-420
               

               
Cow position:
               
chr29:1011640-1011408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
181-420
               

               
Cow position:
               
chr29:44139307-44139060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
198-434
               

               
Cow position:
               
chr29:29923612-29923377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
201-360
               

               
Cow position:
               
chr29:38978495-38978660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
204-441
               

               
Cow position:
               
chr29:21645283-21645523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
205-420
               

               
Cow position:
               
chr29:32197664-32197879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 142
               

               
Conread position:
               
206-417
               

               
Cow position:
               
chr29:23825242-23825030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
207-453
               

               
Cow position:
               
chr29:9310569-9310825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
210-456
               

               
Cow position:
               
chr29:36357100-36357351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
212-417
               

               
Cow position:
               
chr29:22723575-22723778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
218-514
               

               
Cow position:
               
chr29:39038289-39037990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 146
               

               
Conread position:
               
227-434
               

               
Cow position:
               
chr29:19363700-19363908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
242-437
               

               
Cow position:
               
chr29:25288919-25288717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.