Cow genome map
| Conread name: | Mixn-0010d11 |
| Conread position: | 1-457 |
| Cow position: | chr1:93110884-93110418 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 2-182 |
| Cow position: | chr1:88652371-88652568 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 2-198 |
| Cow position: | chr1:76470399-76470608 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 2-332 |
| Cow position: | chr1:7609385-7609686 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 160, 11 |
| Conread position: | 2-457 |
| Cow position: | chr1:91066408-91065944 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 335 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 12, 199 |
| Conread position: | 3-166 |
| Cow position: | chr1:12678270-12678439 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-196 |
| Cow position: | chr1:31348167-31347964 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 3-198 |
| Cow position: | chr1:3137675-3137882 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 3-198 |
| Cow position: | chr1:22448843-22448634 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 3-198 |
| Cow position: | chr1:39069210-39069002 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 199 |
| Conread position: | 3-198 |
| Cow position: | chr1:57635208-57635414 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 3-198 |
| Cow position: | chr1:79844210-79844419 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 3-198 |
| Cow position: | chr1:102647528-102647319 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-200 |
| Cow position: | chr1:33811675-33811884 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 104 |
| Conread position: | 3-201 |
| Cow position: | chr1:68818055-68817843 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 196 |
| Conread position: | 3-206 |
| Cow position: | chr1:57264245-57264036 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 11, 104 |
| Conread position: | 3-405 |
| Cow position: | chr1:74084448-74084054 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 3-412 |
| Cow position: | chr1:6941207-6941611 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 151 |
| Conread position: | 3-412 |
| Cow position: | chr1:6958620-6959024 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 3-444 |
| Cow position: | chr1:70534193-70533757 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 321 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 11, 170 |
| Conread position: | 3-445 |
| Cow position: | chr1:12871266-12870809 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 200 |
| Conread position: | 4-153 |
| Cow position: | chr1:3076649-3076490 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-154 |
| Cow position: | chr1:15028430-15028588 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 4-191 |
| Cow position: | chr1:25856433-25856627 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 4-194 |
| Cow position: | chr1:12596157-12595955 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 4-196 |
| Cow position: | chr1:31414215-31414010 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 29, 196 |
| Conread position: | 4-198 |
| Cow position: | chr1:79278692-79278494 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 4-203 |
| Cow position: | chr1:58889551-58889337 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 8 |
| Conread position: | 4-404 |
| Cow position: | chr1:72141306-72141707 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 288 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 10, 223 |
| Conread position: | 4-453 |
| Cow position: | chr1:41735881-41735440 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 328 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 5-385 |
| Cow position: | chr1:4032379-4032751 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 6-198 |
| Cow position: | chr1:48444438-48444241 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 100 |
| Conread position: | 6-198 |
| Cow position: | chr1:61564537-61564749 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 6-198 |
| Cow position: | chr1:94226802-94226599 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 6-200 |
| Cow position: | chr1:82378540-82378743 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 14, 6 |
| Conread position: | 6-385 |
| Cow position: | chr1:36874759-36875145 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 167 |
| Conread position: | 6-437 |
| Cow position: | chr1:80764791-80764361 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 7, 152 |
| Conread position: | 8-339 |
| Cow position: | chr1:44769363-44769036 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 61, 203 |
| Conread position: | 8-452 |
| Cow position: | chr1:33986771-33986333 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 169 |
| Conread position: | 10-454 |
| Cow position: | chr1:10064229-10063794 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 12-185 |
| Cow position: | chr1:81363745-81363923 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 12-195 |
| Cow position: | chr1:21835699-21835893 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 185 |
| Conread position: | 12-196 |
| Cow position: | chr1:98708193-98708391 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 12-197 |
| Cow position: | chr1:22467681-22467886 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 199 |
| Conread position: | 12-198 |
| Cow position: | chr1:24133304-24133106 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 12-198 |
| Cow position: | chr1:36931910-36932110 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 191 |
| Conread position: | 12-198 |
| Cow position: | chr1:44136711-44136513 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 12-198 |
| Cow position: | chr1:69264573-69264763 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 12-198 |
| Cow position: | chr1:71045506-71045707 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 190 |
| Conread position: | 12-199 |
| Cow position: | chr1:47658106-47658301 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 12-201 |
| Cow position: | chr1:14379779-14379579 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 12-201 |
| Cow position: | chr1:82936831-82936636 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 168 |
| Conread position: | 12-384 |
| Cow position: | chr1:43505274-43505647 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 192 |
| Conread position: | 12-386 |
| Cow position: | chr1:21092842-21093235 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 30, 194 |
| Conread position: | 12-394 |
| Cow position: | chr1:52039388-52039763 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 25, 175 |
| Conread position: | 12-421 |
| Cow position: | chr1:57900990-57900572 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 160 |
| Conread position: | 12-451 |
| Cow position: | chr1:26688727-26688284 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 197 |
| Conread position: | 12-451 |
| Cow position: | chr1:63504090-63504521 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 324 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 25, 147 |
| Conread position: | 12-455 |
| Cow position: | chr1:39418367-39417920 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 25, 190 |
| Conread position: | 12-456 |
| Cow position: | chr1:66355957-66355521 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 155 |
| Conread position: | 12-457 |
| Cow position: | chr1:31390833-31390398 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 317 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 22, 18 |
| Conread position: | 12-457 |
| Cow position: | chr1:35170088-35170521 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 13-198 |
| Cow position: | chr1:75967188-75967384 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 13-198 |
| Cow position: | chr1:97806544-97806741 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 188 |
| Conread position: | 13-201 |
| Cow position: | chr1:47233723-47233523 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 15-195 |
| Cow position: | chr1:71325493-71325297 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 190 |
| Conread position: | 15-198 |
| Cow position: | chr1:51531527-51531719 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 16-194 |
| Cow position: | chr1:84239352-84239164 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 92 |
| Conread position: | 16-198 |
| Cow position: | chr1:84240655-84240845 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 19-457 |
| Cow position: | chr1:25281918-25281464 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 198 |
| Conread position: | 21-200 |
| Cow position: | chr1:95056815-95057010 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 186 |
| Conread position: | 21-386 |
| Cow position: | chr1:29916175-29916531 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 32-198 |
| Cow position: | chr1:78809656-78809833 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 163 |
| Conread position: | 41-199 |
| Cow position: | chr1:14981337-14981166 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 48-199 |
| Cow position: | chr1:68763885-68763729 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 76-450 |
| Cow position: | chr1:42545958-42545594 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 79-451 |
| Cow position: | chr1:24188061-24188407 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 80-385 |
| Cow position: | chr1:73196396-73196110 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 180, 15 |
| Conread position: | 80-417 |
| Cow position: | chr1:75347455-75347778 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 81-385 |
| Cow position: | chr1:43872495-43872201 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 92, 14 |
| Conread position: | 95-385 |
| Cow position: | chr1:86578799-86579081 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 110-445 |
| Cow position: | chr1:72731902-72732218 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 110-457 |
| Cow position: | chr1:70389299-70389643 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 46 |
| Conread position: | 136-435 |
| Cow position: | chr1:26427972-26427689 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 157-457 |
| Cow position: | chr1:20581838-20582135 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 223-456 |
| Cow position: | chr1:75998517-75998278 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 230-380 |
| Cow position: | chr1:95215233-95215076 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 230-421 |
| Cow position: | chr1:65909475-65909660 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 230-450 |
| Cow position: | chr1:541748-541981 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 247-457 |
| Cow position: | chr1:88910922-88910711 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 120 |
| Conread position: | 250-417 |
| Cow position: | chr1:75933251-75933416 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 250-447 |
| Cow position: | chr1:11021000-11021204 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 259-453 |
| Cow position: | chr1:96929031-96929220 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 260-452 |
| Cow position: | chr1:30441950-30442138 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 138, 165 |
| Conread position: | 260-457 |
| Cow position: | chr1:57119354-57119153 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 261-438 |
| Cow position: | chr1:24406903-24406720 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 261-453 |
| Cow position: | chr1:54289198-54289001 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 261-454 |
| Cow position: | chr1:20099363-20099557 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 160, 44 |
| Conread position: | 261-454 |
| Cow position: | chr1:39183833-39183632 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 144 |
| Conread position: | 261-456 |
| Cow position: | chr1:64218432-64218236 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 261-457 |
| Cow position: | chr1:18414472-18414276 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 261-457 |
| Cow position: | chr1:50634262-50634066 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 137, 41 |
| Conread position: | 263-446 |
| Cow position: | chr1:39224930-39224737 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 264-447 |
| Cow position: | chr1:95229334-95229146 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 265-447 |
| Cow position: | chr1:60281371-60281552 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 133 |
| Conread position: | 265-451 |
| Cow position: | chr1:38205472-38205658 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 265-454 |
| Cow position: | chr1:23759779-23759975 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 265-454 |
| Cow position: | chr1:51565534-51565720 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 265-454 |
| Cow position: | chr1:85141732-85141544 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 133, 38 |
| Conread position: | 266-380 |
| Cow position: | chr1:61542919-61542805 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-455 |
| Cow position: | chr1:46205817-46206001 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 129, 34 |
| Conread position: | 269-457 |
| Cow position: | chr1:64624828-64624635 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 118 |
| Conread position: | 274-453 |
| Cow position: | chr1:5347070-5347245 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 275-453 |
| Cow position: | chr1:46821976-46822159 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 280-412 |
| Cow position: | chr1:70416747-70416615 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 285-454 |
| Cow position: | chr1:29337933-29338108 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 288-454 |
| Cow position: | chr1:33921259-33921088 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 290-456 |
| Cow position: | chr1:19416853-19416687 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 134, 29 |
| Conread position: | 290-457 |
| Cow position: | chr1:43789879-43790047 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 41 |
| Conread position: | 293-450 |
| Cow position: | chr1:83926413-83926574 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 151 |
| Conread position: | 298-454 |
| Cow position: | chr1:44169684-44169845 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 308-453 |
| Cow position: | chr1:34920940-34921088 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 321-454 |
| Cow position: | chr1:10674004-10674141 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 339-457 |
| Cow position: | chr1:65671491-65671610 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 87 |
Show alignments to all cow chromosomes.