Cow genome map


           Conread name:
           Mixn-0010d11
        

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               301
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               13, 153
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 202
               

               Conread position:
               2-453
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               315
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               11, 169
               

               Conread position:
               3-182
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 151
               

               Conread position:
               3-196
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 127
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 201
               

               Conread position:
               3-199
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 188
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 206
               

               Conread position:
               3-385
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               3-454
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 179
               

               Conread position:
               4-170
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               4-198
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 168
               

               Conread position:
               4-201
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               4-390
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               4-407
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               4-455
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               5-201
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               6-198
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 6
               

               Conread position:
               6-202
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               27, 6
               

               Conread position:
               6-206
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 6
               

               Conread position:
               6-451
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               339
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               31, 6
               

               Conread position:
               7-182
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 5
               

               Conread position:
               7-385
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               30, 5
               

               Conread position:
               7-386
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               26, 215
               

               Conread position:
               11-198
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 188
               

               Conread position:
               12-139
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               12-191
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               12-195
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 158
               

               Conread position:
               12-195
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 188
               

               Conread position:
               12-195
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               12-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 191
               

               Conread position:
               12-198
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 159
               

               Conread position:
               12-198
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 193
               

               Conread position:
               12-201
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 156
               

               Conread position:
               12-201
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               12-201
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               12-201
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 6
               

               Conread position:
               12-319
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               12-356
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 148
               

               Conread position:
               12-384
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 196
               

               Conread position:
               12-385
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               12-450
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               314
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               25, 192
               

               Conread position:
               12-452
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               12-455
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               317
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               12-456
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 170
               

               Conread position:
               12-457
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               25, 148
               

               Conread position:
               13-369
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 191
               

               Conread position:
               13-407
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               13-457
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 194
               

               Conread position:
               14-198
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 192
               

               Conread position:
               14-453
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 198
               

               Conread position:
               15-197
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               15-198
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 155
               

               Conread position:
               17-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               17-453
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               312
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               25, 133
               

               Conread position:
               18-336
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               48, 182
               

               Conread position:
               19-172
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               20-201
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               21-355
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 132
               

               Conread position:
               32-457
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               298
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               34-420
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               27, 153
               

               Conread position:
               71-457
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               76-182
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               77-445
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               80-457
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               270
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               95-454
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               154, 47
               

               Conread position:
               111-394
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               197, 63
               

               Conread position:
               115-385
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 80
               

               Conread position:
               212-445
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               213-457
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               215-454
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               216-457
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               172, 26
               

               Conread position:
               230-386
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               230-389
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               230-453
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               231-422
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               246-436
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               247-454
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               247-457
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               14, 24
               

               Conread position:
               248-455
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               260-452
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               6, 192
               

               Conread position:
               262-456
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               265-451
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               265-457
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               266-386
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               266-412
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 50
               

               Conread position:
               266-457
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               266-457
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               119, 39
               

               Conread position:
               267-455
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               268-451
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               81, 40
               

               Conread position:
               269-456
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               274-455
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 150
               

               Conread position:
               279-451
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               145, 28
               

               Conread position:
               287-456
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               307-452
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               310-454
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 29
               
Show alignments to all cow chromosomes.