Cow genome map

Conread name: Mixn-0010d11

Conread position: 2-361
Cow position: chr13:8201235-8201588 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 10

Conread position: 2-423
Cow position: chr13:17970785-17971194 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 283
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 11

Conread position: 3-140
Cow position: chr13:29671190-29671341 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 3-143
Cow position: chr13:21107375-21107233 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 57

Conread position: 3-198
Cow position: chr13:9246965-9246761 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 165

Conread position: 3-201
Cow position: chr13:46501555-46501337 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 206

Conread position: 3-352
Cow position: chr13:11954864-11955212 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 34, 144

Conread position: 3-384
Cow position: chr13:18166981-18166605 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 276
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 11, 206

Conread position: 3-447
Cow position: chr13:16343935-16343499 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 318
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 32, 11

Conread position: 3-454
Cow position: chr13:34995075-34995530 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 171

Conread position: 4-153
Cow position: chr13:20879585-20879748 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 54

Conread position: 4-192
Cow position: chr13:17622532-17622325 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 8

Conread position: 4-198
Cow position: chr13:2414275-2414067 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 199

Conread position: 4-198
Cow position: chr13:47313151-47312960 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 8

Conread position: 4-385
Cow position: chr13:9142530-9142153 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 60, 8

Conread position: 4-412
Cow position: chr13:19393535-19393139 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 33, 14

Conread position: 4-457
Cow position: chr13:6621348-6621794 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 302
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 66

Conread position: 6-198
Cow position: chr13:6079173-6079380 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 6

Conread position: 6-198
Cow position: chr13:37516890-37517098 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 7

Conread position: 6-201
Cow position: chr13:1767013-1766806 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 6

Conread position: 6-201
Cow position: chr13:18835432-18835228 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 6

Conread position: 6-356
Cow position: chr13:18244102-18243763 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 6

Conread position: 6-368
Cow position: chr13:38277889-38278259 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 223

Conread position: 6-385
Cow position: chr13:43762413-43762041 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 28, 6

Conread position: 8-198
Cow position: chr13:60429833-60430036 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 190

Conread position: 8-441
Cow position: chr13:28683604-28683176 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 125

Conread position: 11-452
Cow position: chr13:42200860-42200404 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 293
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 193

Conread position: 12-195
Cow position: chr13:15974851-15974654 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 12-197
Cow position: chr13:34931070-34931248 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 12-198
Cow position: chr13:7076497-7076297 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 192

Conread position: 12-201
Cow position: chr13:55843725-55843515 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 198

Conread position: 12-202
Cow position: chr13:25927033-25926825 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 21, 205

Conread position: 12-202
Cow position: chr13:52894383-52894178 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 192

Conread position: 12-206
Cow position: chr13:1839621-1839414 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 137

Conread position: 12-362
Cow position: chr13:25531551-25531895 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 17

Conread position: 12-370
Cow position: chr13:45353283-45352919 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 254
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 25

Conread position: 12-400
Cow position: chr13:38012602-38012187 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 199

Conread position: 12-404
Cow position: chr13:20270975-20271369 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 271
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 143

Conread position: 12-437
Cow position: chr13:23265970-23265548 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 26, 92

Conread position: 12-453
Cow position: chr13:20180638-20180216 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 74

Conread position: 12-457
Cow position: chr13:9803298-9802865 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 24

Conread position: 12-457
Cow position: chr13:32773603-32773160 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 305
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 156

Conread position: 13-444
Cow position: chr13:20466055-20466476 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 13-447
Cow position: chr13:8838754-8839175 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 308
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 186

Conread position: 14-197
Cow position: chr13:20820602-20820796 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 186

Conread position: 14-198
Cow position: chr13:13266040-13265847 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 181

Conread position: 14-385
Cow position: chr13:56148778-56148393 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 258
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 38

Conread position: 14-441
Cow position: chr13:43194414-43193984 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 190

Conread position: 14-452
Cow position: chr13:25434890-25435322 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 106

Conread position: 15-196
Cow position: chr13:41154808-41154991 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 68

Conread position: 15-198
Cow position: chr13:15869357-15869161 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 134

Conread position: 15-385
Cow position: chr13:21276093-21275731 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 22, 169

Conread position: 17-422
Cow position: chr13:60650684-60651073 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 109

Conread position: 17-438
Cow position: chr13:17347041-17346627 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 289
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 155

Conread position: 17-457
Cow position: chr13:51940965-51940525 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 101

Conread position: 20-198
Cow position: chr13:47963968-47964156 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 147

Conread position: 20-457
Cow position: chr13:54095037-54094606 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 28

Conread position: 21-198
Cow position: chr13:54093972-54093783 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 95

Conread position: 29-381
Cow position: chr13:32657584-32657924 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 171

Conread position: 32-385
Cow position: chr13:18491813-18491468 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 82

Conread position: 82-457
Cow position: chr13:47188602-47188240 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 24, 12

Conread position: 95-455
Cow position: chr13:25537775-25537418 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 89, 109

Conread position: 95-457
Cow position: chr13:8245193-8245535 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 67

Conread position: 95-457
Cow position: chr13:52251654-52252003 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 190, 47

Conread position: 112-451
Cow position: chr13:21563868-21563530 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 79

Conread position: 113-455
Cow position: chr13:2803594-2803267 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 23, 59

Conread position: 125-452
Cow position: chr13:47322291-47322608 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 20, 78

Conread position: 212-413
Cow position: chr13:53788066-53788266 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 96, 23

Conread position: 223-386
Cow position: chr13:6980959-6980792 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 151

Conread position: 223-454
Cow position: chr13:33975467-33975232 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 95

Conread position: 233-451
Cow position: chr13:1558492-1558711 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 75, 37

Conread position: 247-438
Cow position: chr13:12207059-12206859 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 247-452
Cow position: chr13:32657390-32657184 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 62, 178

Conread position: 248-444
Cow position: chr13:13446145-13446345 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 117

Conread position: 261-451
Cow position: chr13:52569006-52569201 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 159
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 265-453
Cow position: chr13:40885494-40885301 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 20

Conread position: 265-457
Cow position: chr13:34665119-34664927 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 37

Conread position: 266-385
Cow position: chr13:19750707-19750587 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 66

Conread position: 266-386
Cow position: chr13:24753879-24753758 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 266-443
Cow position: chr13:21295067-21294894 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 117

Conread position: 266-453
Cow position: chr13:20520053-20519854 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 267-456
Cow position: chr13:22075660-22075468 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 131, 70

Conread position: 280-455
Cow position: chr13:2339155-2338974 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 27

Conread position: 280-457
Cow position: chr13:18665713-18665535 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 23

Conread position: 286-454
Cow position: chr13:26522965-26523137 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 296-450
Cow position: chr13:54564675-54564834 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 307-456
Cow position: chr13:56270287-56270442 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 307-456
Cow position: chr13:56281185-56281030 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 0

Show alignments to all cow chromosomes.