Cow genome map
| Conread name: | Mixn-0010d11 |
| Conread position: | 1-439 |
| Cow position: | chr14:47974290-47973856 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 203 |
| Conread position: | 2-183 |
| Cow position: | chr14:38379330-38379131 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 2-198 |
| Cow position: | chr14:43046454-43046244 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 15, 129 |
| Conread position: | 2-453 |
| Cow position: | chr14:38355491-38355047 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 3-190 |
| Cow position: | chr14:15033065-15032864 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 12, 119 |
| Conread position: | 3-198 |
| Cow position: | chr14:27312731-27312522 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 3-198 |
| Cow position: | chr14:41128199-41127990 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 3-437 |
| Cow position: | chr14:12559175-12559603 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 3-452 |
| Cow position: | chr14:25231342-25231776 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 3-453 |
| Cow position: | chr14:23107635-23107177 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 204 |
| Conread position: | 3-456 |
| Cow position: | chr14:26108949-26108488 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 3-457 |
| Cow position: | chr14:2189957-2189489 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 3-457 |
| Cow position: | chr14:25385583-25386032 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 173 |
| Conread position: | 4-196 |
| Cow position: | chr14:49021596-49021805 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 202 |
| Conread position: | 4-206 |
| Cow position: | chr14:9255004-9255211 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 4-425 |
| Cow position: | chr14:25779400-25778993 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 4-447 |
| Cow position: | chr14:47027069-47027508 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 130 |
| Conread position: | 6-201 |
| Cow position: | chr14:10907021-10906808 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 6 |
| Conread position: | 6-429 |
| Cow position: | chr14:18904304-18904724 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 297 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 7-389 |
| Cow position: | chr14:16834635-16834247 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 7, 173 |
| Conread position: | 8-386 |
| Cow position: | chr14:45605393-45605026 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 6, 197 |
| Conread position: | 8-451 |
| Cow position: | chr14:21018415-21017976 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 6, 198 |
| Conread position: | 10-196 |
| Cow position: | chr14:12613802-12613996 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 12-196 |
| Cow position: | chr14:19222178-19221979 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 192 |
| Conread position: | 12-198 |
| Cow position: | chr14:5836203-5836003 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 180 |
| Conread position: | 12-198 |
| Cow position: | chr14:12856894-12856697 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 12-198 |
| Cow position: | chr14:14621887-14622084 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 188 |
| Conread position: | 12-198 |
| Cow position: | chr14:24992111-24991918 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 12-198 |
| Cow position: | chr14:33828448-33828256 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 12-198 |
| Cow position: | chr14:38143815-38144013 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 144 |
| Conread position: | 12-199 |
| Cow position: | chr14:33247139-33247337 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 188 |
| Conread position: | 12-201 |
| Cow position: | chr14:8784474-8784277 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 183 |
| Conread position: | 12-201 |
| Cow position: | chr14:12488403-12488606 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 143 |
| Conread position: | 12-201 |
| Cow position: | chr14:29605938-29606140 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 12-201 |
| Cow position: | chr14:30662286-30662079 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 195 |
| Conread position: | 12-201 |
| Cow position: | chr14:39769932-39770140 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 196 |
| Conread position: | 12-364 |
| Cow position: | chr14:34221353-34221011 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 193 |
| Conread position: | 12-370 |
| Cow position: | chr14:41180417-41180770 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 12-454 |
| Cow position: | chr14:18309011-18309462 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 12-457 |
| Cow position: | chr14:19863142-19863568 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 322 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 13-197 |
| Cow position: | chr14:48740588-48740774 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 13-198 |
| Cow position: | chr14:7270718-7270912 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 133 |
| Conread position: | 13-198 |
| Cow position: | chr14:21964414-21964214 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 13-198 |
| Cow position: | chr14:38921235-38921045 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 90 |
| Conread position: | 15-457 |
| Cow position: | chr14:13810233-13809789 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 190 |
| Conread position: | 16-198 |
| Cow position: | chr14:14466185-14466381 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 17-198 |
| Cow position: | chr14:8102072-8101886 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 177 |
| Conread position: | 27-412 |
| Cow position: | chr14:6541438-6541824 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 65 |
| Conread position: | 32-451 |
| Cow position: | chr14:21691003-21691416 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 165 |
| Conread position: | 32-457 |
| Cow position: | chr14:34355425-34355845 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 95-447 |
| Cow position: | chr14:11615022-11615358 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 212-457 |
| Cow position: | chr14:10692169-10692407 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 262-428 |
| Cow position: | chr14:20045603-20045435 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 262-456 |
| Cow position: | chr14:41531612-41531808 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 47, 103 |
| Conread position: | 264-455 |
| Cow position: | chr14:16207447-16207652 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 266-411 |
| Cow position: | chr14:15491205-15491060 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 266-434 |
| Cow position: | chr14:12127361-12127539 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 266-453 |
| Cow position: | chr14:12954336-12954536 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 267-446 |
| Cow position: | chr14:25639724-25639907 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 268-457 |
| Cow position: | chr14:7647972-7648167 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 271-454 |
| Cow position: | chr14:44032079-44031891 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 275-447 |
| Cow position: | chr14:45849180-45849354 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 123, 28 |
| Conread position: | 280-388 |
| Cow position: | chr14:37436675-37436784 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 284-446 |
| Cow position: | chr14:48399539-48399369 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 293-455 |
| Cow position: | chr14:47600388-47600550 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 294-420 |
| Cow position: | chr14:5400606-5400477 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 296-452 |
| Cow position: | chr14:24799689-24799849 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 300-455 |
| Cow position: | chr14:43314997-43314839 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 335-453 |
| Cow position: | chr14:8927672-8927550 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.