Cow genome map

Conread name: Mixn-0010d11

Conread position: 3-191
Cow position: chr17:9079409-9079216 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 11

Conread position: 3-196
Cow position: chr17:21313026-21312825 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 28

Conread position: 3-197
Cow position: chr17:20209034-20208842 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 34

Conread position: 3-198
Cow position: chr17:8690665-8690454 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 202

Conread position: 3-198
Cow position: chr17:9746296-9746502 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 35

Conread position: 3-198
Cow position: chr17:22032908-22032703 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 76

Conread position: 3-199
Cow position: chr17:9778026-9778236 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 104

Conread position: 3-201
Cow position: chr17:24761448-24761237 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 35

Conread position: 3-203
Cow position: chr17:38276467-38276680 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 11, 199

Conread position: 3-428
Cow position: chr17:11216108-11215700 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 285
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 195

Conread position: 3-452
Cow position: chr17:20215947-20216390 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 312
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 162

Conread position: 3-457
Cow position: chr17:35388235-35387772 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 4-191
Cow position: chr17:30999554-30999752 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 8

Conread position: 4-198
Cow position: chr17:12059310-12059107 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 16

Conread position: 4-206
Cow position: chr17:13236948-13236730 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 8

Conread position: 5-359
Cow position: chr17:3781822-3782171 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 200

Conread position: 6-139
Cow position: chr17:14848743-14848600 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 6

Conread position: 6-143
Cow position: chr17:3387074-3387213 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 6

Conread position: 6-191
Cow position: chr17:39857196-39857375 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 135, 6

Conread position: 6-196
Cow position: chr17:1295791-1295584 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 6

Conread position: 6-201
Cow position: chr17:23803248-23803449 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 6

Conread position: 6-449
Cow position: chr17:25815388-25815835 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 310
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 6

Conread position: 6-453
Cow position: chr17:32457800-32457346 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 311
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 6

Conread position: 8-201
Cow position: chr17:13244246-13244050 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 58

Conread position: 8-385
Cow position: chr17:22563967-22564338 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 256
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 21

Conread position: 12-140
Cow position: chr17:7423656-7423513 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 12-172
Cow position: chr17:15132951-15133117 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 12-187
Cow position: chr17:25078208-25078024 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 25

Conread position: 12-197
Cow position: chr17:21335913-21335708 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 197

Conread position: 12-198
Cow position: chr17:20839773-20839573 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 41

Conread position: 12-198
Cow position: chr17:30665059-30665259 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 10

Conread position: 12-198
Cow position: chr17:41290232-41290035 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 188

Conread position: 12-199
Cow position: chr17:42347436-42347237 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 147

Conread position: 12-201
Cow position: chr17:5041891-5041691 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 42

Conread position: 12-201
Cow position: chr17:21419217-21419427 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 198

Conread position: 12-201
Cow position: chr17:26084820-26085025 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 162

Conread position: 12-206
Cow position: chr17:33999259-33999053 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 148

Conread position: 12-374
Cow position: chr17:27697907-27697560 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 136

Conread position: 12-384
Cow position: chr17:25097248-25097607 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 25, 191

Conread position: 12-394
Cow position: chr17:27047948-27048317 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 155

Conread position: 12-453
Cow position: chr17:24580514-24580071 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 196

Conread position: 12-455
Cow position: chr17:8279922-8279488 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 319
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 56, 192

Conread position: 13-198
Cow position: chr17:8544096-8544295 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 56, 22

Conread position: 14-198
Cow position: chr17:13143903-13143703 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 191

Conread position: 14-199
Cow position: chr17:11102007-11101812 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 103

Conread position: 15-198
Cow position: chr17:28539824-28540017 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 184

Conread position: 15-201
Cow position: chr17:1526565-1526364 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 49, 22

Conread position: 18-192
Cow position: chr17:20848322-20848505 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 113

Conread position: 32-356
Cow position: chr17:6566278-6566606 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 166

Conread position: 81-359
Cow position: chr17:11962679-11962406 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 5

Conread position: 95-388
Cow position: chr17:31856546-31856828 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 211, 50

Conread position: 95-406
Cow position: chr17:41892181-41891887 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 213, 46

Conread position: 114-449
Cow position: chr17:11344119-11344426 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 77

Conread position: 212-444
Cow position: chr17:13716052-13715819 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 24

Conread position: 212-456
Cow position: chr17:10886420-10886184 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 24

Conread position: 226-457
Cow position: chr17:23147410-23147647 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 101

Conread position: 230-439
Cow position: chr17:5380953-5381162 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 64

Conread position: 249-385
Cow position: chr17:13600961-13600826 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 25

Conread position: 256-457
Cow position: chr17:27819319-27819520 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 52, 169

Conread position: 257-452
Cow position: chr17:36173948-36173743 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 9, 32

Conread position: 265-432
Cow position: chr17:33913542-33913371 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 265-455
Cow position: chr17:10769478-10769283 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 266-396
Cow position: chr17:4891329-4891198 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 266-453
Cow position: chr17:33925987-33925792 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 268-374
Cow position: chr17:43641063-43640956 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 268-457
Cow position: chr17:3620050-3619858 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 159
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 97

Conread position: 269-445
Cow position: chr17:19239842-19239663 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 32

Conread position: 275-457
Cow position: chr17:10314464-10314650 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 65

Conread position: 280-454
Cow position: chr17:14661489-14661320 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 119, 27

Conread position: 280-456
Cow position: chr17:12768758-12768581 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 28

Conread position: 284-433
Cow position: chr17:5041354-5041201 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 35

Conread position: 284-454
Cow position: chr17:7163843-7163667 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 294-454
Cow position: chr17:9927420-9927584 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 38

Conread position: 296-447
Cow position: chr17:27809426-27809275 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 131

Conread position: 300-450
Cow position: chr17:25338234-25338385 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 83

Show alignments to all cow chromosomes.