Cow genome map
| Conread name: | Mixn-0010d11 |
| Conread position: | 2-184 |
| Cow position: | chr19:33882433-33882242 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 10 |
| Conread position: | 2-198 |
| Cow position: | chr19:32457364-32457579 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 12, 141 |
| Conread position: | 2-455 |
| Cow position: | chr19:56063706-56063248 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 33, 211 |
| Conread position: | 3-139 |
| Cow position: | chr19:24423738-24423883 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 3-182 |
| Cow position: | chr19:7492164-7492355 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-196 |
| Cow position: | chr19:13316678-13316483 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 3-198 |
| Cow position: | chr19:10080792-10081003 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 202 |
| Conread position: | 3-198 |
| Cow position: | chr19:14993197-14992987 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 3-202 |
| Cow position: | chr19:35380824-35380609 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 3-366 |
| Cow position: | chr19:47109766-47110124 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 3-457 |
| Cow position: | chr19:42694713-42695185 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 341 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 4-196 |
| Cow position: | chr19:17273996-17273796 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 109 |
| Conread position: | 4-198 |
| Cow position: | chr19:40051661-40051456 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 54 |
| Conread position: | 5-198 |
| Cow position: | chr19:48409245-48409446 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 6-196 |
| Cow position: | chr19:33932413-33932215 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 6-198 |
| Cow position: | chr19:2734177-2734386 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 36, 6 |
| Conread position: | 6-198 |
| Cow position: | chr19:23005637-23005425 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 6-201 |
| Cow position: | chr19:3119314-3119517 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 158 |
| Conread position: | 6-385 |
| Cow position: | chr19:6417328-6417711 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 6 |
| Conread position: | 6-445 |
| Cow position: | chr19:38907623-38907196 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 316 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 63, 6 |
| Conread position: | 8-197 |
| Cow position: | chr19:36379979-36380178 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 5 |
| Conread position: | 12-193 |
| Cow position: | chr19:31826843-31827032 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 90 |
| Conread position: | 12-196 |
| Cow position: | chr19:38638068-38637872 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 189 |
| Conread position: | 12-197 |
| Cow position: | chr19:990676-990485 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 12-197 |
| Cow position: | chr19:8839336-8839537 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 193 |
| Conread position: | 12-198 |
| Cow position: | chr19:630679-630867 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 12-198 |
| Cow position: | chr19:44757873-44757684 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 12-201 |
| Cow position: | chr19:42240558-42240353 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 193 |
| Conread position: | 12-205 |
| Cow position: | chr19:38396538-38396336 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 153 |
| Conread position: | 12-386 |
| Cow position: | chr19:14592784-14593158 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 196 |
| Conread position: | 12-386 |
| Cow position: | chr19:27180526-27180148 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 173 |
| Conread position: | 12-422 |
| Cow position: | chr19:53738068-53738474 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 182 |
| Conread position: | 12-446 |
| Cow position: | chr19:36461793-36461361 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 153 |
| Conread position: | 12-455 |
| Cow position: | chr19:9387367-9387810 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 314 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 12-456 |
| Cow position: | chr19:40449765-40450197 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 311 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 13-197 |
| Cow position: | chr19:3246300-3246117 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 15-198 |
| Cow position: | chr19:27348525-27348335 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 15-198 |
| Cow position: | chr19:38340238-38340044 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 57, 185 |
| Conread position: | 19-197 |
| Cow position: | chr19:2589252-2589443 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 30-206 |
| Cow position: | chr19:32989637-32989457 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 74 |
| Conread position: | 33-201 |
| Cow position: | chr19:13129638-13129811 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 76-356 |
| Cow position: | chr19:22450124-22449853 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 80-451 |
| Cow position: | chr19:48478795-48479147 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 96-454 |
| Cow position: | chr19:31535961-31536301 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 97-417 |
| Cow position: | chr19:10556874-10557189 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 140 |
| Conread position: | 115-457 |
| Cow position: | chr19:10971260-10970912 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 120-443 |
| Cow position: | chr19:29115600-29115911 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 266, 69 |
| Conread position: | 212-454 |
| Cow position: | chr19:31984717-31984475 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 94, 31 |
| Conread position: | 231-452 |
| Cow position: | chr19:33882240-33882019 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 35 |
| Conread position: | 246-455 |
| Cow position: | chr19:12040582-12040794 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 261-451 |
| Cow position: | chr19:35344904-35345100 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 265-454 |
| Cow position: | chr19:46713618-46713817 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 105 |
| Conread position: | 265-457 |
| Cow position: | chr19:26003634-26003436 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 160 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 267-448 |
| Cow position: | chr19:4824997-4824813 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 268-453 |
| Cow position: | chr19:36245509-36245318 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 270-422 |
| Cow position: | chr19:5653343-5653193 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 119 |
| Conread position: | 284-454 |
| Cow position: | chr19:1153206-1153381 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 289-445 |
| Cow position: | chr19:42102591-42102434 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 321-457 |
| Cow position: | chr19:30653054-30652914 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.