Cow genome map

Conread name: Mixn-0010d11

Conread position: 3-196
Cow position: chr20:14735454-14735663 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 202

Conread position: 3-198
Cow position: chr20:7442347-7442138 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 147

Conread position: 3-198
Cow position: chr20:18185356-18185556 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 102

Conread position: 3-198
Cow position: chr20:20312960-20312757 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 194

Conread position: 3-198
Cow position: chr20:24398855-24398644 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 3-199
Cow position: chr20:29633212-29633009 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 9

Conread position: 3-201
Cow position: chr20:12420844-12420627 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 172

Conread position: 3-201
Cow position: chr20:18618416-18618626 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 162

Conread position: 3-457
Cow position: chr20:10838442-10837984 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 161

Conread position: 4-196
Cow position: chr20:4621559-4621357 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 8

Conread position: 4-201
Cow position: chr20:14831833-14831622 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 9

Conread position: 4-323
Cow position: chr20:6571110-6571429 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 146

Conread position: 4-451
Cow position: chr20:39405548-39405984 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 306
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 8

Conread position: 4-453
Cow position: chr20:10759685-10759247 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 317
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 10

Conread position: 5-456
Cow position: chr20:35364833-35365267 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 303
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 7

Conread position: 6-318
Cow position: chr20:13967476-13967167 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 5

Conread position: 6-454
Cow position: chr20:17363908-17363430 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 30

Conread position: 7-201
Cow position: chr20:38768672-38768464 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 194

Conread position: 11-182
Cow position: chr20:27339853-27340037 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 157

Conread position: 12-198
Cow position: chr20:6096698-6096504 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 106

Conread position: 12-198
Cow position: chr20:12334169-12334364 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 74

Conread position: 12-198
Cow position: chr20:35958436-35958635 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 18

Conread position: 12-199
Cow position: chr20:8020682-8020888 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 196

Conread position: 12-201
Cow position: chr20:7182889-7182682 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 196

Conread position: 12-386
Cow position: chr20:26076872-26077239 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 163

Conread position: 12-403
Cow position: chr20:17251498-17251890 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 24

Conread position: 12-421
Cow position: chr20:12996222-12995816 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 290
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 118

Conread position: 12-429
Cow position: chr20:39728236-39728648 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 193

Conread position: 12-444
Cow position: chr20:6903116-6903531 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 307
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 36

Conread position: 12-455
Cow position: chr20:25823071-25823506 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 301
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 45

Conread position: 12-455
Cow position: chr20:35843325-35842899 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 311
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 124

Conread position: 12-457
Cow position: chr20:20359984-20359552 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 57, 18

Conread position: 13-198
Cow position: chr20:9473826-9473625 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 119

Conread position: 13-362
Cow position: chr20:32578132-32577789 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 157

Conread position: 14-456
Cow position: chr20:33170085-33169623 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 312
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 158

Conread position: 16-453
Cow position: chr20:14806677-14807129 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 320
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 189

Conread position: 48-404
Cow position: chr20:20934928-20934558 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 18

Conread position: 76-420
Cow position: chr20:30648343-30648008 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 16, 77

Conread position: 78-456
Cow position: chr20:41110244-41109867 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 68

Conread position: 79-445
Cow position: chr20:1575964-1576312 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 81

Conread position: 230-455
Cow position: chr20:21236659-21236877 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 18

Conread position: 247-451
Cow position: chr20:9706903-9706693 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 248-453
Cow position: chr20:24849824-24850026 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 137

Conread position: 248-457
Cow position: chr20:23163882-23163674 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 135, 59

Conread position: 250-452
Cow position: chr20:4934049-4933844 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 90

Conread position: 265-450
Cow position: chr20:2430579-2430763 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 131, 42

Conread position: 265-455
Cow position: chr20:4157457-4157645 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 57, 38

Conread position: 273-457
Cow position: chr20:2487188-2487375 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 109, 99

Conread position: 276-396
Cow position: chr20:6053422-6053301 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 276-449
Cow position: chr20:33532349-33532532 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 280-456
Cow position: chr20:39285010-39285192 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 287-456
Cow position: chr20:13617283-13617462 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 290-448
Cow position: chr20:8445088-8444926 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 138

Conread position: 295-448
Cow position: chr20:14513097-14513250 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 132

Conread position: 304-454
Cow position: chr20:6571690-6571837 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 16

Show alignments to all cow chromosomes.