Cow genome map
| Conread name: | Mixn-0010d11 |
| Conread position: | 1-193 |
| Cow position: | chr22:5836964-5837166 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 1-386 |
| Cow position: | chr22:13840873-13841250 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 2-192 |
| Cow position: | chr22:32480735-32480541 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 2-201 |
| Cow position: | chr22:41271262-41271053 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 23, 197 |
| Conread position: | 2-203 |
| Cow position: | chr22:25476794-25477008 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 149 |
| Conread position: | 3-193 |
| Cow position: | chr22:34750408-34750617 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-195 |
| Cow position: | chr22:13235277-13235480 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 3-198 |
| Cow position: | chr22:14602664-14602454 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-198 |
| Cow position: | chr22:23854713-23854917 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 34, 195 |
| Conread position: | 3-201 |
| Cow position: | chr22:2623783-2623573 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 198 |
| Conread position: | 3-203 |
| Cow position: | chr22:10685351-10685139 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 3-450 |
| Cow position: | chr22:19787948-19787504 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 205 |
| Conread position: | 3-453 |
| Cow position: | chr22:27223865-27224309 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 117 |
| Conread position: | 3-454 |
| Cow position: | chr22:41244977-41245432 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 186 |
| Conread position: | 4-182 |
| Cow position: | chr22:11489276-11489461 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-198 |
| Cow position: | chr22:37201589-37201797 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 199 |
| Conread position: | 4-200 |
| Cow position: | chr22:15398844-15398631 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 4-201 |
| Cow position: | chr22:7979449-7979650 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 4-206 |
| Cow position: | chr22:28058309-28058102 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 104 |
| Conread position: | 4-386 |
| Cow position: | chr22:26339493-26339863 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 4-412 |
| Cow position: | chr22:4076166-4075749 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 151 |
| Conread position: | 4-435 |
| Cow position: | chr22:23856782-23857203 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 307 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 6-356 |
| Cow position: | chr22:34398719-34398375 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 6-359 |
| Cow position: | chr22:34476264-34475916 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 6-455 |
| Cow position: | chr22:26184424-26183980 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 30, 6 |
| Conread position: | 6-456 |
| Cow position: | chr22:9520886-9521317 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 6 |
| Conread position: | 10-198 |
| Cow position: | chr22:26658794-26658997 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 160 |
| Conread position: | 12-196 |
| Cow position: | chr22:610188-609996 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 12-197 |
| Cow position: | chr22:10683924-10683718 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 198 |
| Conread position: | 12-201 |
| Cow position: | chr22:32221403-32221590 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 42 |
| Conread position: | 12-208 |
| Cow position: | chr22:11987476-11987261 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 194 |
| Conread position: | 12-368 |
| Cow position: | chr22:1975353-1975702 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 193 |
| Conread position: | 12-370 |
| Cow position: | chr22:4583311-4583657 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 12-394 |
| Cow position: | chr22:14005892-14006297 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 31, 222 |
| Conread position: | 12-396 |
| Cow position: | chr22:13274214-13274601 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 12-432 |
| Cow position: | chr22:4650922-4651340 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 148 |
| Conread position: | 12-457 |
| Cow position: | chr22:19048062-19047628 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 312 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 12-457 |
| Cow position: | chr22:23581080-23580660 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 14-385 |
| Cow position: | chr22:24066492-24066123 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 190 |
| Conread position: | 15-191 |
| Cow position: | chr22:1991233-1991414 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 15-197 |
| Cow position: | chr22:28731430-28731617 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 19-205 |
| Cow position: | chr22:12946418-12946216 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 24, 184 |
| Conread position: | 48-198 |
| Cow position: | chr22:23403852-23403705 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 68-396 |
| Cow position: | chr22:7102646-7102953 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 240, 29 |
| Conread position: | 76-386 |
| Cow position: | chr22:1848880-1849185 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 95-206 |
| Cow position: | chr22:1081344-1081456 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 78, 93 |
| Conread position: | 95-444 |
| Cow position: | chr22:42946217-42945881 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 95-451 |
| Cow position: | chr22:15358082-15358426 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 212-443 |
| Cow position: | chr22:26941733-26941959 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 229-444 |
| Cow position: | chr22:8397878-8397654 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 230-452 |
| Cow position: | chr22:4753806-4753576 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 33, 145 |
| Conread position: | 259-454 |
| Cow position: | chr22:4036565-4036757 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 139, 48 |
| Conread position: | 259-456 |
| Cow position: | chr22:13921342-13921533 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 165, 50 |
| Conread position: | 261-451 |
| Cow position: | chr22:15424121-15424314 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 261-452 |
| Cow position: | chr22:2434199-2434394 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 154 |
| Conread position: | 261-457 |
| Cow position: | chr22:16234139-16234340 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 263-449 |
| Cow position: | chr22:33592444-33592256 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 263-454 |
| Cow position: | chr22:35029256-35029460 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 265-437 |
| Cow position: | chr22:1081777-1081954 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 266-455 |
| Cow position: | chr22:10553695-10553496 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 268-451 |
| Cow position: | chr22:17184694-17184506 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 268-456 |
| Cow position: | chr22:11878052-11877859 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 289-449 |
| Cow position: | chr22:29256615-29256780 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 291-456 |
| Cow position: | chr22:43873072-43873242 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 293-447 |
| Cow position: | chr22:25168272-25168118 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 131, 103 |
Show alignments to all cow chromosomes.