Cow genome map
| Conread name: | Mixn-0010d11 |
| Conread position: | 3-386 |
| Cow position: | chr23:6592957-6592591 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 4-359 |
| Cow position: | chr23:36309166-36309510 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 4-454 |
| Cow position: | chr23:5389438-5389887 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 160 |
| Conread position: | 6-198 |
| Cow position: | chr23:11845028-11845224 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 144 |
| Conread position: | 6-385 |
| Cow position: | chr23:5162167-5162545 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 119 |
| Conread position: | 6-452 |
| Cow position: | chr23:6683474-6683930 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 7-196 |
| Cow position: | chr23:7596589-7596385 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 7-203 |
| Cow position: | chr23:20057125-20056913 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 8-198 |
| Cow position: | chr23:25864941-25864745 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 159 |
| Conread position: | 8-456 |
| Cow position: | chr23:20171319-20171771 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 325 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 5, 23 |
| Conread position: | 12-196 |
| Cow position: | chr23:10014291-10014485 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 12-196 |
| Cow position: | chr23:10554265-10554062 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 198 |
| Conread position: | 12-197 |
| Cow position: | chr23:14838989-14838793 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 188 |
| Conread position: | 12-198 |
| Cow position: | chr23:33711518-33711710 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 12-201 |
| Cow position: | chr23:24509449-24509653 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 12-359 |
| Cow position: | chr23:15710330-15709982 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 197 |
| Conread position: | 12-360 |
| Cow position: | chr23:2799314-2799672 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 9 |
| Conread position: | 12-385 |
| Cow position: | chr23:1924087-1923722 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 12-385 |
| Cow position: | chr23:26632546-26632920 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 196 |
| Conread position: | 12-385 |
| Cow position: | chr23:27563963-27563590 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 12-453 |
| Cow position: | chr23:20585966-20585514 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 25, 203 |
| Conread position: | 13-328 |
| Cow position: | chr23:7402453-7402760 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 200 |
| Conread position: | 14-196 |
| Cow position: | chr23:33940408-33940209 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 139 |
| Conread position: | 14-384 |
| Cow position: | chr23:14164652-14164280 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 191 |
| Conread position: | 15-322 |
| Cow position: | chr23:18371154-18370846 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 16-367 |
| Cow position: | chr23:4562638-4562983 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 20-388 |
| Cow position: | chr23:6767646-6768025 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 21-385 |
| Cow position: | chr23:16700284-16699926 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 184 |
| Conread position: | 26-455 |
| Cow position: | chr23:40891122-40891552 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 113 |
| Conread position: | 29-197 |
| Cow position: | chr23:27544595-27544776 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 173 |
| Conread position: | 76-457 |
| Cow position: | chr23:23409567-23409925 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 80-455 |
| Cow position: | chr23:21659771-21660144 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 94-457 |
| Cow position: | chr23:24704124-24704493 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 95-457 |
| Cow position: | chr23:35177164-35177512 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 78, 52 |
| Conread position: | 110-452 |
| Cow position: | chr23:26050895-26051225 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 67, 81 |
| Conread position: | 212-453 |
| Cow position: | chr23:35155321-35155561 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 212-456 |
| Cow position: | chr23:21276075-21275829 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 223-447 |
| Cow position: | chr23:11751194-11750953 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 230-456 |
| Cow position: | chr23:40651520-40651282 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 117 |
| Conread position: | 256-453 |
| Cow position: | chr23:22272494-22272290 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 259-454 |
| Cow position: | chr23:19774757-19774955 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 259-457 |
| Cow position: | chr23:7611257-7611450 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 139, 44 |
| Conread position: | 261-448 |
| Cow position: | chr23:29272106-29272292 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 265-453 |
| Cow position: | chr23:20388656-20388460 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 266-385 |
| Cow position: | chr23:3244473-3244353 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 295-457 |
| Cow position: | chr23:33927832-33927999 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 299-456 |
| Cow position: | chr23:24411034-24411196 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 309-449 |
| Cow position: | chr23:30736107-30735967 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 309-454 |
| Cow position: | chr23:18370636-18370491 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 114 |
| Conread position: | 328-452 |
| Cow position: | chr23:41221066-41220943 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 96 |
Show alignments to all cow chromosomes.