Cow genome map
| Conread name: | Mixn-0010d11 |
| Conread position: | 3-158 |
| Cow position: | chr24:24854369-24854535 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 151 |
| Conread position: | 3-191 |
| Cow position: | chr24:44702688-44702894 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-201 |
| Cow position: | chr24:39258874-39259083 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 188 |
| Conread position: | 3-385 |
| Cow position: | chr24:33098777-33098384 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 150 |
| Conread position: | 3-452 |
| Cow position: | chr24:34396447-34396012 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 307 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 11, 66 |
| Conread position: | 3-457 |
| Cow position: | chr24:39350498-39350061 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 165 |
| Conread position: | 4-196 |
| Cow position: | chr24:6508050-6507845 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 4-196 |
| Cow position: | chr24:17763540-17763347 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 6-385 |
| Cow position: | chr24:43432517-43432877 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 7-201 |
| Cow position: | chr24:24250446-24250653 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 192 |
| Conread position: | 8-370 |
| Cow position: | chr24:11839895-11840261 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 148 |
| Conread position: | 12-195 |
| Cow position: | chr24:18970772-18970587 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 12-198 |
| Cow position: | chr24:18331456-18331644 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 179 |
| Conread position: | 12-198 |
| Cow position: | chr24:18405584-18405398 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 12-200 |
| Cow position: | chr24:2730850-2730649 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 180 |
| Conread position: | 12-206 |
| Cow position: | chr24:25229337-25229128 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 157 |
| Conread position: | 12-211 |
| Cow position: | chr24:38375005-38375220 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 193 |
| Conread position: | 12-362 |
| Cow position: | chr24:39807878-39808195 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 12-385 |
| Cow position: | chr24:19466213-19465829 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 12-385 |
| Cow position: | chr24:44041290-44040919 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 193 |
| Conread position: | 12-388 |
| Cow position: | chr24:40129845-40130221 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 12-404 |
| Cow position: | chr24:27290597-27290981 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 13-198 |
| Cow position: | chr24:27720031-27719833 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 187 |
| Conread position: | 13-421 |
| Cow position: | chr24:39681576-39681977 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 290 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 21, 197 |
| Conread position: | 15-198 |
| Cow position: | chr24:27967803-27967999 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 160 |
| Conread position: | 18-201 |
| Cow position: | chr24:35529649-35529845 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 145 |
| Conread position: | 21-452 |
| Cow position: | chr24:24755184-24755607 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 293 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 76-437 |
| Cow position: | chr24:27824259-27824599 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 234, 10 |
| Conread position: | 81-437 |
| Cow position: | chr24:6061599-6061238 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 95-455 |
| Cow position: | chr24:2143563-2143911 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 50, 84 |
| Conread position: | 95-457 |
| Cow position: | chr24:27054225-27054571 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 97 |
| Conread position: | 107-452 |
| Cow position: | chr24:31258508-31258181 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 51 |
| Conread position: | 115-438 |
| Cow position: | chr24:26455677-26455986 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 212-446 |
| Cow position: | chr24:25164954-25165188 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 223-456 |
| Cow position: | chr24:25677948-25678188 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 42, 88 |
| Conread position: | 234-365 |
| Cow position: | chr24:12992978-12993109 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 30, 121 |
| Conread position: | 250-400 |
| Cow position: | chr24:25112150-25112302 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 261-416 |
| Cow position: | chr24:12452749-12452905 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 261-453 |
| Cow position: | chr24:23824457-23824273 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 294-455 |
| Cow position: | chr24:39764865-39765016 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 34 |
Show alignments to all cow chromosomes.