Cow genome map
| Conread name: | Mixn-0010d11 |
| Conread position: | 1-375 |
| Cow position: | chr25:787999-788360 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 197 |
| Conread position: | 2-384 |
| Cow position: | chr25:1837971-1838351 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 3-412 |
| Cow position: | chr25:14791485-14791891 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 204 |
| Conread position: | 3-454 |
| Cow position: | chr25:20076226-20076681 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 4-186 |
| Cow position: | chr25:2110818-2111008 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 4-199 |
| Cow position: | chr25:9754340-9754145 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 4-370 |
| Cow position: | chr25:36037047-36036683 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 10, 211 |
| Conread position: | 5-420 |
| Cow position: | chr25:18161039-18161430 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 6-196 |
| Cow position: | chr25:21245869-21245661 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 6-198 |
| Cow position: | chr25:22297282-22297074 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 8, 199 |
| Conread position: | 6-385 |
| Cow position: | chr25:16866969-16867352 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 6 |
| Conread position: | 8-377 |
| Cow position: | chr25:16064634-16064995 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 6, 108 |
| Conread position: | 8-451 |
| Cow position: | chr25:40957247-40956807 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 5 |
| Conread position: | 12-184 |
| Cow position: | chr25:18448579-18448771 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 143 |
| Conread position: | 12-196 |
| Cow position: | chr25:12204212-12204412 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 193 |
| Conread position: | 12-198 |
| Cow position: | chr25:6891778-6891582 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 153 |
| Conread position: | 12-198 |
| Cow position: | chr25:16001779-16001580 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 31, 190 |
| Conread position: | 12-199 |
| Cow position: | chr25:26700782-26700977 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 174 |
| Conread position: | 12-201 |
| Cow position: | chr25:12239397-12239200 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 12-206 |
| Cow position: | chr25:25961706-25961912 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 161 |
| Conread position: | 12-207 |
| Cow position: | chr25:4522075-4521883 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 12-385 |
| Cow position: | chr25:21895141-21894774 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 12-418 |
| Cow position: | chr25:17658357-17658753 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 12-451 |
| Cow position: | chr25:5407492-5407913 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 57, 101 |
| Conread position: | 13-194 |
| Cow position: | chr25:26238614-26238811 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 192 |
| Conread position: | 13-201 |
| Cow position: | chr25:20496283-20496483 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 17-455 |
| Cow position: | chr25:18265911-18266346 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 314 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 185 |
| Conread position: | 24-198 |
| Cow position: | chr25:6256182-6255991 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 32-385 |
| Cow position: | chr25:12840954-12840607 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 32-445 |
| Cow position: | chr25:8576457-8576867 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 137 |
| Conread position: | 32-447 |
| Cow position: | chr25:23410427-23410835 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 138 |
| Conread position: | 34-196 |
| Cow position: | chr25:12081542-12081378 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 76-454 |
| Cow position: | chr25:27535088-27534736 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 19 |
| Conread position: | 106-457 |
| Cow position: | chr25:34379252-34378910 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 216-444 |
| Cow position: | chr25:36501310-36501067 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 248-437 |
| Cow position: | chr25:13560238-13560048 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 92 |
| Conread position: | 250-455 |
| Cow position: | chr25:14075279-14075487 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 90 |
| Conread position: | 255-449 |
| Cow position: | chr25:20428300-20428496 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 261-452 |
| Cow position: | chr25:33205092-33204904 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 89 |
| Conread position: | 261-457 |
| Cow position: | chr25:18448799-18448997 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 261-457 |
| Cow position: | chr25:26240525-26240725 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 49, 79 |
| Conread position: | 267-403 |
| Cow position: | chr25:7380847-7380711 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 130 |
| Conread position: | 268-453 |
| Cow position: | chr25:34970458-34970637 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 281-447 |
| Cow position: | chr25:18228188-18228352 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 7 |
Show alignments to all cow chromosomes.