Cow genome map
| Conread name: | Mixn-0010d11 |
| Conread position: | 3-151 |
| Cow position: | chr27:21578380-21578544 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-187 |
| Cow position: | chr27:22179575-22179774 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 3-198 |
| Cow position: | chr27:6550673-6550467 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 3-198 |
| Cow position: | chr27:30765254-30765046 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 3-201 |
| Cow position: | chr27:30677121-30676916 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 3-206 |
| Cow position: | chr27:25676455-25676229 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 210 |
| Conread position: | 3-455 |
| Cow position: | chr27:20765743-20766183 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 3-457 |
| Cow position: | chr27:19543687-19544152 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 208 |
| Conread position: | 4-198 |
| Cow position: | chr27:9090580-9090793 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 206 |
| Conread position: | 4-198 |
| Cow position: | chr27:22498774-22498567 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 196 |
| Conread position: | 4-198 |
| Cow position: | chr27:28518504-28518305 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 4-201 |
| Cow position: | chr27:795001-794796 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 4-385 |
| Cow position: | chr27:27640771-27641167 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 10, 157 |
| Conread position: | 4-455 |
| Cow position: | chr27:15319671-15319236 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 323 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 6-455 |
| Cow position: | chr27:25998922-25998476 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 7-201 |
| Cow position: | chr27:30561130-30560921 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 6, 197 |
| Conread position: | 8-201 |
| Cow position: | chr27:13006049-13005847 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 40 |
| Conread position: | 8-206 |
| Cow position: | chr27:25411302-25411517 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 198 |
| Conread position: | 8-369 |
| Cow position: | chr27:22454562-22454916 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 8, 205 |
| Conread position: | 11-197 |
| Cow position: | chr27:25885737-25885932 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 12-197 |
| Cow position: | chr27:1768423-1768611 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 140 |
| Conread position: | 12-197 |
| Cow position: | chr27:28164199-28164395 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 188 |
| Conread position: | 12-237 |
| Cow position: | chr27:26440846-26441088 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 12-394 |
| Cow position: | chr27:2592753-2592377 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 26, 182 |
| Conread position: | 16-197 |
| Cow position: | chr27:12596964-12596776 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 18-396 |
| Cow position: | chr27:19647738-19648110 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 21-384 |
| Cow position: | chr27:19546301-19546667 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 178 |
| Conread position: | 76-198 |
| Cow position: | chr27:4011811-4011687 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 18 |
| Conread position: | 230-405 |
| Cow position: | chr27:6884037-6883855 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 230-445 |
| Cow position: | chr27:26441046-26441268 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 113 |
| Conread position: | 256-455 |
| Cow position: | chr27:24341877-24341672 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 265-452 |
| Cow position: | chr27:22245590-22245396 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 266-444 |
| Cow position: | chr27:22225632-22225807 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 158, 41 |
| Conread position: | 266-457 |
| Cow position: | chr27:7662984-7662793 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 269-422 |
| Cow position: | chr27:12191518-12191672 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 293-446 |
| Cow position: | chr27:14226760-14226604 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 122 |
| Conread position: | 299-453 |
| Cow position: | chr27:1899642-1899799 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 308-435 |
| Cow position: | chr27:6037091-6036960 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 125 |
| Conread position: | 311-456 |
| Cow position: | chr27:23147610-23147461 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 54 |
Show alignments to all cow chromosomes.